Clone Name | rbart55a09 |
---|---|
Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 56.2 bits (134), Expect = 4e-08 Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 9/67 (13%) Frame = -2 Query: 461 YGFSTNLRACCGAGGGKYNYQNGARCGMSG---------ASACGNPSSSLSWDGIHLTEA 309 +GF +L +CCG GG KYNY G CGM C P ++ WDG+H T+A Sbjct: 294 HGFKGSLVSCCGHGG-KYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQA 352 Query: 308 AYKKIAD 288 A K I D Sbjct: 353 ANKFIFD 359
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 48.9 bits (115), Expect = 6e-06 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 9/79 (11%) Frame = -2 Query: 461 YGFSTNLRACCGAGGGKYNYQNGARCGMSGAS---------ACGNPSSSLSWDGIHLTEA 309 +GF L CCG GG KYN+ A CG + + +C PS ++WDG H TEA Sbjct: 296 HGFEFPLITCCGYGG-KYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEA 354 Query: 308 AYKKIADGWVNGPYCHPAI 252 A + D G + P + Sbjct: 355 ANEYFFDQISTGAFSDPPV 373
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 47.0 bits (110), Expect = 2e-05 Identities = 24/56 (42%), Positives = 28/56 (50%) Frame = -2 Query: 461 YGFSTNLRACCGAGGGKYNYQNGARCGMSGASACGNPSSSLSWDGIHLTEAAYKKI 294 YGF + CC G GA C S + C N SS L WDG+H T+ AYK I Sbjct: 469 YGFEETKKPCCKTG----LLSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAYKTI 520
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 34.3 bits (77), Expect = 0.16 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = -2 Query: 461 YGFSTNLRACCGAGGGKYNYQNGARCGMSGASACGNPSSSLSWDGIHLTEAAYK 300 YGF + CC G K G C N SS L WDG+H ++ AY+ Sbjct: 386 YGFEEIKKPCCKIGLTK----GGVFCKERTLKNMSNASSYLFWDGLHPSQRAYE 435
>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)| (Endo-1,4-beta-glucanase) (Cellulase) (Fragment) Length = 224 Score = 34.3 bits (77), Expect = 0.16 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = -2 Query: 350 SSSLSWDGIHLTEAAYKKIADGW 282 ++ +SWDG+HL+E Y KIA+ W Sbjct: 111 NTDISWDGLHLSEIGYTKIANIW 133
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 31.6 bits (70), Expect = 1.0 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Frame = -2 Query: 452 STNLRACCGAGGGKYNYQNGARCGMSG----ASACGNPSSSLSW 333 S+N +GGG + NG G SG +S+ GNPS+S SW Sbjct: 586 SSNWGGSSSSGGGWGSSNNGGYSGYSGRSNGSSSYGNPSASNSW 629
>P53_CANFA (Q29537) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 381 Score = 29.3 bits (64), Expect = 5.1 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = +1 Query: 295 IFLYAASVRWMPSQLSDDDGLPHADAPDMPHRAPFW*LYLPPPAPQ 432 + L + V W+ D +P AP P AP W L P+P+ Sbjct: 43 LLLPESVVNWLDEDSDDAPRMPATSAPTAPGPAPSWPLSSSVPSPK 88
>LGB3_MEDSA (P14962) Leghemoglobin-3 (Leghemoglobin III)| Length = 146 Score = 28.9 bits (63), Expect = 6.7 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -1 Query: 261 PGHSVLVLVLVLERAPASGCSSVSFLEAGEGRGGSP 154 PG+SVL ++LE+APA+ SFL+ G SP Sbjct: 22 PGNSVLFYTIILEKAPAAK-GMFSFLKDSAGVQDSP 56
>KIF17_MOUSE (Q99PW8) Kinesin-like protein KIF17 (MmKIF17)| Length = 1038 Score = 28.5 bits (62), Expect = 8.7 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +1 Query: 280 TQPSAIFLYAASVRWMPSQLSDDDGLPHADAPDMPHRAPF 399 T P Y S + S LS++ LP P+MP PF Sbjct: 973 TDPMKSLTYHNSPPGLNSSLSNNSALPPTQTPEMPQPRPF 1012 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,894,671 Number of Sequences: 219361 Number of extensions: 1091498 Number of successful extensions: 3472 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3320 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3459 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)