>THT1_SCHPO (Q09684) Nuclear fusion protein tht1|
          Length = 577

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 153 RGSVCICFPSIENHTYWYTSISSHYYSGTHLSCLS 257
           RGS   C   +E+ + W+ S +SH++   HL  L+
Sbjct: 114 RGSQSECVSKLESTSTWWLSFTSHFHDVNHLCRLA 148

>ENGC1_BACTN (Q8A5I9) Probable GTPase engC protein 1 (EC 3.6.1.-)|
          Length = 310

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -2

Query: 206 VPVRMIFDGREAYANAAPSSIDHALDTYTHVCVPRNYIVGFKISSK 69
           VPV+++F+  +AY       +D  ++ YTH+  P      FK+S+K
Sbjct: 119 VPVKLVFNKVDAYNEDELRYLDALINLYTHIGYP-----CFKVSAK 159

>NOE4_RHIME (P06231) Nodulation protein E (Host-specificity of nodulation|
           protein B) (EC 2.3.1.-)
          Length = 401

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
 Frame = -2

Query: 287 GLGLGTWDATAEAAQMRPRVVVA*YTSVPVRMIFDGREAYANAAPSSIDHALDT------ 126
           G+GLG WDAT +A   RP +     T      IF G +A  +AA   +  +L        
Sbjct: 104 GVGLGGWDATEKA--YRPSLSTGGRTE-----IFTGVKAMPSAAACQVSMSLGLRGPVFG 156

Query: 125 YTHVCVPRNYIVGFKISSKLDEI 57
            T  C   N+     I+S +D+I
Sbjct: 157 VTSACSSANH----AIASAVDQI 175

>ENH1_PANTR (P61559) ERV-H1 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) (Env protein) (ERV-H/env62)
           [Contains: Surface protein (SU); Transmembrane protein
           (TM)]
          Length = 457

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 210 SISSHYYSGTHLSCLSGRIPSSQPKPCT 293
           +ISSHY  G HL C+S  +    P PC+
Sbjct: 222 NISSHYCLGRHLPCIS--LHPWLPSPCS 247

>NELL2_MOUSE (Q61220) Protein kinase C-binding protein NELL2 precursor (NEL-like|
           protein 2) (MEL91 protein)
          Length = 816

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 316 VRMRTLCIVQGLG--WELGMRPLRQLRCVPE 230
           V +RT C++ GLG  W LG+ P  Q+  + E
Sbjct: 5   VLLRTFCVILGLGAVWGLGVDPSLQIDVLTE 35

>NUOF_RICPR (Q9ZE33) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain F) (NDH-1, chain F)
          Length = 421

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 201 WYTSISSHYYSGTHLSCLSGRIPSSQPKPCTIHNV 305
           W+ +I     +GT + C+SG +     KPC I  V
Sbjct: 227 WFAAIGKPNNTGTKVFCISGHV----NKPCNIEEV 257

>GPR31_HUMAN (O00270) Probable G-protein coupled receptor 31|
          Length = 319

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -1

Query: 333 IRACTPYVCAHYVLYRAW-VGNLGC 262
           + AC P++ A Y+  +AW +G +GC
Sbjct: 63  LAACLPFLAAFYLSLQAWHLGRVGC 87

>GEA1_YEAST (P47102) ARF guanine-nucleotide exchange factor 1|
          Length = 1408

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 34  FILYYFGQISSSFDEILNPTI*FLGTHTCVYVSSA*SIE 150
           FI YYF     SFD+  N T+  LG  T +  SSA ++E
Sbjct: 838 FINYYF-----SFDQSYNDTVLHLGEMTTLAQSSAKAVE 871

>NUBM_ASPNG (Q92406) NADH-ubiquinone oxidoreductase 51 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-51KD) (CI-51KD)
          Length = 496

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 201 WYTSISSHYYSGTHLSCLSGRIPSSQPKPCTI 296
           W++S      +GT L C+SG + +    PCT+
Sbjct: 275 WFSSFGRERNAGTKLFCISGHVNN----PCTV 302

>DISS_TRIJE (Q7ZZM2) Disintegrin jerdostatin precursor|
          Length = 110

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 195 TYWYTSISSHYYSGTHLSCLS 257
           T W TS+SSHY +G    C S
Sbjct: 85  TCWRTSVSSHYCTGRSCECPS 105

>TRUB_BRAJA (Q89WB1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 345

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = -2

Query: 197 RMIFD---GREAYANAAPSSIDHALDTYTHVCVPRNYIVG 87
           R +F+   G+  Y  A    +   L TY H+C  R  +VG
Sbjct: 192 RAVFEAECGKGTYVRALARDMGRILGTYGHICALRRTLVG 231


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,380,709
Number of Sequences: 219361
Number of extensions: 1117242
Number of successful extensions: 2482
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2482
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)