ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart54h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC068066.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 44 0.100
2emb|CR762487.7| Zebrafish DNA sequence from clone CH211-197G14 i... 44 0.100
3gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosom... 42 0.39
4gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC F11A1... 42 0.39
5gb|AC078941.6| Homo sapiens BAC clone RP11-180B10 from 2, comple... 42 0.39
6dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome 42 0.39
7emb|AJ318331.1|SCE318331 Saccharomyces cerevisiae SAP155 gene fo... 42 0.39
8gb|U50560.1|SCU50560 Saccharomyces cerevisiae Sap155p (SAP155) g... 42 0.39
9dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI co... 42 0.39
10gb|BC084090.1| Xenopus laevis furin, mRNA (cDNA clone MGC:82710 ... 40 1.6
11emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4,... 40 1.6
12emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4,... 40 1.6
13gb|AC074276.18| Homo sapiens 3 BAC RP11-113A11 (Roswell Park Can... 40 1.6
14gb|AC112502.7| Homo sapiens 3 BAC RP11-880C10 (Roswell Park Canc... 40 1.6
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
16gb|AC097483.3| Homo sapiens BAC clone RP11-146N10 from 2, comple... 40 1.6
17emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 1.6
18dbj|AB097541.1| Macaca fascicularis brain cDNA clone:QflA-21008,... 40 1.6
19gb|BC053213.1| Danio rerio ankyrin repeat and SOCS box-containin... 38 6.2
20ref|XM_718068.1| Candida albicans SC5314 fatty acid synthase alp... 38 6.2
21ref|XM_718067.1| Candida albicans SC5314 hypothetical protein (C... 38 6.2
22ref|XM_717921.1| Candida albicans SC5314 fatty acid synthase alp... 38 6.2
23ref|XM_717920.1| Candida albicans SC5314 hypothetical protein (C... 38 6.2
24gb|AC146075.3| Pan troglodytes BAC clone RP43-15H6 from 7, compl... 38 6.2
25gb|AC147901.2| Xenopus tropicalis clone CH216-57C20, complete se... 38 6.2
26gb|AC146252.3| Pan troglodytes BAC clone RP43-31D18 from 7, comp... 38 6.2
27gb|AC146386.3| Pan troglodytes BAC clone RP43-126O23 from 7, com... 38 6.2
28emb|BX511265.13| Zebrafish DNA sequence from clone RP71-45G20 in... 38 6.2
29gb|AC132430.3| Mus musculus BAC clone RP23-208D22 from chromosom... 38 6.2
30ref|XM_801811.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 6.2
31gb|AC121767.3| Mus musculus BAC clone RP23-339E1 from chromosome... 38 6.2
32gb|AC016877.11| Homo sapiens chromosome 8, clone RP11-44N12, com... 38 6.2
33gb|AC122931.4| Mus musculus BAC clone RP23-15C15 from 9, complet... 38 6.2
34gb|AC138642.10| Mus musculus chromosome 3, clone RP23-21O7, comp... 38 6.2
35gb|AC080064.6| Homo sapiens BAC clone RP13-492P3 from 7, complet... 38 6.2
36gb|AC161350.3| Mus musculus chromosome 3, clone RP24-356H12, com... 38 6.2
37gb|AC135197.1| Rattus norvegicus BAC CH230-348O5 (Children's Hos... 38 6.2
38emb|AL450489.12| Human DNA sequence from clone RP11-203B9 on chr... 38 6.2
39emb|AL596166.1| Listeria innocua Clip11262 complete genome, segm... 38 6.2
40gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, comp... 38 6.2
41emb|CR857679.1| Pongo pygmaeus mRNA; cDNA DKFZp469D2017 (from cl... 38 6.2
42gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, com... 38 6.2
43gb|AC126474.6| Homo sapiens 12 BAC RP11-135F9 (Roswell Park Canc... 38 6.2
44gb|AC145202.24| Medicago truncatula clone mth2-15e9, complete se... 38 6.2
45gb|AC119037.6| Homo sapiens 3 BAC RP11-495D2 (Roswell Park Cance... 38 6.2
46gb|AC117426.3| Homo sapiens 3 BAC RP11-130C13 (Roswell Park Canc... 38 6.2
47gb|AC109351.3| Homo sapiens BAC clone RP11-417M17 from 4, comple... 38 6.2
48gb|AE009963.1| Streptococcus pyogenes strain MGAS8232, section 1... 38 6.2
49gb|AC091931.2| Homo sapiens chromosome 5 clone RP11-313L6, compl... 38 6.2
50gb|AC016994.8| Homo sapiens BAC clone RP11-19J8 from 2, complete... 38 6.2
51ref|NM_199770.1| Danio rerio ankyrin repeat and SOCS box-contain... 38 6.2
52gb|AC093608.3| Homo sapiens BAC clone RP11-700C8 from 4, complet... 38 6.2
53gb|AC020661.8| Homo sapiens chromosome 15 clone RP11-540O11 map ... 38 6.2
54gb|AC154495.2| Mus musculus BAC clone RP24-111M22 from chromosom... 38 6.2
55gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosom... 38 6.2
56gb|AC155231.2| Mus musculus BAC clone RP24-336I23 from chromosom... 38 6.2
57gb|AC016566.6| Homo sapiens chromosome 5 clone CTC-547G6, comple... 38 6.2
58gb|AC025166.7|AC025166 Homo sapiens chromosome 15 clone CTD-2129... 38 6.2
59gb|AY905522.1| Streptococcus pyogenes strain D821 Nra (nra) gene... 38 6.2
60gb|AY905521.1| Streptococcus pyogenes strain D633 Nra (nra) gene... 38 6.2
61gb|AY905520.1| Streptococcus pyogenes strain D502 Nra (nra) gene... 38 6.2
62gb|AY905519.1| Streptococcus pyogenes strain ALAB49 Nra (nra) ge... 38 6.2
63gb|AY905518.1| Streptococcus pyogenes strain A946 Nra (nra) gene... 38 6.2
64gb|AY905517.1| Streptococcus pyogenes strain 29689 Nra (nra) gen... 38 6.2
65gb|AY905516.1| Streptococcus pyogenes strain 29487 Nra (nra) gen... 38 6.2
66gb|AY905515.1| Streptococcus pyogenes strain 88-019 Nra (nra) ge... 38 6.2
67emb|BX324205.5| Zebrafish DNA sequence from clone CH211-10K1 in ... 38 6.2
68gb|AC018710.4|AC018710 Homo sapiens BAC clone RP11-296L20 from 4... 38 6.2
69emb|AJ634156.1| Agrostemma githago partial rpc2 gene for RNA Pol... 38 6.2
70emb|AJ634155.1| Agrostemma githago partial rpc2 gene for RNA Pol... 38 6.2
71emb|BX324116.7| Zebrafish DNA sequence from clone CH211-114G7 in... 38 6.2
72dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.2
73dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.2
74gb|AC126321.1| Polypterus bichir, clone -22F22, complete sequence 38 6.2
75gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome 38 6.2
76dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.2
77dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic D... 38 6.2
78dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome 38 6.2
79gb|AC011422.2|AC011422 Homo sapiens chromosome 5 clone CTD-2335E... 38 6.2
80dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic D... 38 6.2
81emb|AJ554968.1|HIM554968 Human immunodeficiency virus type 1 pro... 38 6.2
82emb|BX470205.12| Zebrafish DNA sequence from clone DKEYP-118B7 i... 38 6.2
83gb|U49397.1|SPU49397 Streptococcus pyogenes MsmR (msmR) gene, pa... 38 6.2
84dbj|AP003127.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 38 6.2
85dbj|AP001034.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 38 6.2
86gb|AC100967.15| Mus musculus chromosome 5, clone RP23-74L20, com... 38 6.2
87emb|AL672273.9| Mouse DNA sequence from clone RP23-15A12 on chro... 38 6.2
88gb|L29063.1|YSAFAS2A Candida albicans fatty acid synthase alpha ... 38 6.2
89dbj|AP003691.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 38 6.2 
>gb|AC068066.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-414I9, complete
             sequence
          Length = 184879

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 9     acatattattttcatttctgac 30
             ||||||||||||||||||||||
Sbjct: 28421 acatattattttcatttctgac 28400
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>emb|CR762487.7| Zebrafish DNA sequence from clone CH211-197G14 in linkage group 13,
             complete sequence
          Length = 219918

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 2     caaaacaacatattattttcatttctgact 31
             |||| |||||||||||||| ||||||||||
Sbjct: 30708 caaatcaacatattattttgatttctgact 30679
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>gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosome 17, complete
             sequence
          Length = 181626

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    tattattttcatttctgactt 32
             |||||||||||||||||||||
Sbjct: 53731 tattattttcatttctgactt 53711
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>gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC F11A17 sequence, complete
             sequence
          Length = 102078

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    gcaagtttgcaaccaaacaaa 111
             |||||||||||||||||||||
Sbjct: 69328 gcaagtttgcaaccaaacaaa 69348
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>gb|AC078941.6| Homo sapiens BAC clone RP11-180B10 from 2, complete sequence
          Length = 165176

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     ggaaaagattggaacaaaaca 82
              |||||||||||||||||||||
Sbjct: 109121 ggaaaagattggaacaaaaca 109101
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>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      aacaacatattattttcattt 25
              |||||||||||||||||||||
Sbjct: 344896 aacaacatattattttcattt 344916
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>emb|AJ318331.1|SCE318331 Saccharomyces cerevisiae SAP155 gene for Sit4p phosphatase-associated
            protein
          Length = 4061

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 101  aaccaaacaaaaaaggggaac 121
            |||||||||||||||||||||
Sbjct: 3747 aaccaaacaaaaaaggggaac 3727
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>gb|U50560.1|SCU50560 Saccharomyces cerevisiae Sap155p (SAP155) gene, complete cds
          Length = 3709

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 101  aaccaaacaaaaaaggggaac 121
            |||||||||||||||||||||
Sbjct: 3706 aaccaaacaaaaaaggggaac 3686
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>dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI complete DNA sequence
          Length = 270148

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    aaccaaacaaaaaaggggaac 121
              |||||||||||||||||||||
Sbjct: 237457 aaccaaacaaaaaaggggaac 237437
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>gb|BC084090.1| Xenopus laevis furin, mRNA (cDNA clone MGC:82710 IMAGE:5129847),
            complete cds
          Length = 5724

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   gattggaacaaaacaaatcc 87
            ||||||||||||||||||||
Sbjct: 5537 gattggaacaaaacaaatcc 5556
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>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04,
              complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     gcaagtttgcaaccaaacaa 110
              ||||||||||||||||||||
Sbjct: 169372 gcaagtttgcaaccaaacaa 169353
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>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05,
             complete sequence
          Length = 149134

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    gcaagtttgcaaccaaacaa 110
             ||||||||||||||||||||
Sbjct: 53914 gcaagtttgcaaccaaacaa 53895
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>gb|AC074276.18| Homo sapiens 3 BAC RP11-113A11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191241

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      aacatattattttcatttct 27
              ||||||||||||||||||||
Sbjct: 190121 aacatattattttcatttct 190102
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>gb|AC112502.7| Homo sapiens 3 BAC RP11-880C10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 104564

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      aacatattattttcatttct 27
              ||||||||||||||||||||
Sbjct: 103681 aacatattattttcatttct 103700
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 91      gcaagtttgcaaccaaacaa 110
               ||||||||||||||||||||
Sbjct: 6891043 gcaagtttgcaaccaaacaa 6891024
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>gb|AC097483.3| Homo sapiens BAC clone RP11-146N10 from 2, complete sequence
          Length = 98433

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aacatattattttcatttct 27
             ||||||||||||||||||||
Sbjct: 32103 aacatattattttcatttct 32084
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>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete
             sequence
          Length = 140069

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    gcaagtttgcaaccaaacaa 110
             ||||||||||||||||||||
Sbjct: 82698 gcaagtttgcaaccaaacaa 82679
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>dbj|AB097541.1| Macaca fascicularis brain cDNA clone:QflA-21008, full insert sequence
          Length = 3256

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    ccaaaacaacatattattttcatt 24
            |||||||||||||| |||||||||
Sbjct: 3232 ccaaaacaacatatcattttcatt 3209
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>gb|BC053213.1| Danio rerio ankyrin repeat and SOCS box-containing 8, mRNA (cDNA
            clone MGC:64033 IMAGE:6793364), complete cds
          Length = 1963

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 2    caaaacaacatattatttt 20
            |||||||||||||||||||
Sbjct: 1492 caaaacaacatattatttt 1510
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>ref|XM_718068.1| Candida albicans SC5314 fatty acid synthase alpha subunit C terminal
            fragment (CaO19_5949), mRNA
          Length = 2718

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 64   aaaagattggaacaaaacaaatc 86
            |||||||||||||||| ||||||
Sbjct: 1417 aaaagattggaacaaatcaaatc 1439
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>ref|XM_718067.1| Candida albicans SC5314 hypothetical protein (CaO19_5948), mRNA
          Length = 369

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 64  aaaagattggaacaaaacaaatc 86
           |||||||||||||||| ||||||
Sbjct: 105 aaaagattggaacaaatcaaatc 83
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>ref|XM_717921.1| Candida albicans SC5314 fatty acid synthase alpha subunit C terminal
            fragment (CaO19_13370), mRNA
          Length = 2718

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 64   aaaagattggaacaaaacaaatc 86
            |||||||||||||||| ||||||
Sbjct: 1417 aaaagattggaacaaatcaaatc 1439
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>ref|XM_717920.1| Candida albicans SC5314 hypothetical protein (CaO19_13369), mRNA
          Length = 369

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 64  aaaagattggaacaaaacaaatc 86
           |||||||||||||||| ||||||
Sbjct: 105 aaaagattggaacaaatcaaatc 83
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>gb|AC146075.3| Pan troglodytes BAC clone RP43-15H6 from 7, complete sequence
          Length = 174752

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 102    accaaacaaaaaaggggaa 120
              |||||||||||||||||||
Sbjct: 155581 accaaacaaaaaaggggaa 155563
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>gb|AC147901.2| Xenopus tropicalis clone CH216-57C20, complete sequence
          Length = 151523

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 103   ccaaacaaaaaaggggaac 121
             |||||||||||||||||||
Sbjct: 38052 ccaaacaaaaaaggggaac 38070
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>gb|AC146252.3| Pan troglodytes BAC clone RP43-31D18 from 7, complete sequence
          Length = 155242

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    accaaacaaaaaaggggaa 120
              |||||||||||||||||||
Sbjct: 130649 accaaacaaaaaaggggaa 130667
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>gb|AC146386.3| Pan troglodytes BAC clone RP43-126O23 from 7, complete sequence
          Length = 160593

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 102   accaaacaaaaaaggggaa 120
             |||||||||||||||||||
Sbjct: 70722 accaaacaaaaaaggggaa 70704
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>emb|BX511265.13| Zebrafish DNA sequence from clone RP71-45G20 in linkage group 9,
             complete sequence
          Length = 183988

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    tgcaaccaaacaaaaaagg 116
             |||||||||||||||||||
Sbjct: 13117 tgcaaccaaacaaaaaagg 13135
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>gb|AC132430.3| Mus musculus BAC clone RP23-208D22 from chromosome 9, complete sequence
          Length = 192991

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      caaaacaacatattatttt 20
              |||||||||||||||||||
Sbjct: 192812 caaaacaacatattatttt 192794
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>ref|XM_801811.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509219.10) partial mRNA
          Length = 318

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 102 accaaacaaaaaaggggaa 120
           |||||||||||||||||||
Sbjct: 7   accaaacaaaaaaggggaa 25
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>gb|AC121767.3| Mus musculus BAC clone RP23-339E1 from chromosome 1, complete sequence
          Length = 184736

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 58     caaaggaaaagattggaacaaaa 80
              |||| ||||||||||||||||||
Sbjct: 181904 caaatgaaaagattggaacaaaa 181882
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>gb|AC016877.11| Homo sapiens chromosome 8, clone RP11-44N12, complete sequence
          Length = 188593

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 33     gcaggaaaagacaattact 51
              |||||||||||||||||||
Sbjct: 137660 gcaggaaaagacaattact 137678
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>gb|AC122931.4| Mus musculus BAC clone RP23-15C15 from 9, complete sequence
          Length = 192274

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      caaaacaacatattatttt 20
              |||||||||||||||||||
Sbjct: 146087 caaaacaacatattatttt 146105
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>gb|AC138642.10| Mus musculus chromosome 3, clone RP23-21O7, complete sequence
          Length = 252108

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 31     ttgcaggaaaagacaatta 49
              |||||||||||||||||||
Sbjct: 238920 ttgcaggaaaagacaatta 238902
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>gb|AC080064.6| Homo sapiens BAC clone RP13-492P3 from 7, complete sequence
          Length = 82149

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 102   accaaacaaaaaaggggaa 120
             |||||||||||||||||||
Sbjct: 41587 accaaacaaaaaaggggaa 41605
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>gb|AC161350.3| Mus musculus chromosome 3, clone RP24-356H12, complete sequence
          Length = 156180

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     ttgcaggaaaagacaatta 49
              |||||||||||||||||||
Sbjct: 137459 ttgcaggaaaagacaatta 137477
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>gb|AC135197.1| Rattus norvegicus BAC CH230-348O5 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 176608

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    atattattttcatttctga 29
             |||||||||||||||||||
Sbjct: 32831 atattattttcatttctga 32849
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>emb|AL450489.12| Human DNA sequence from clone RP11-203B9 on chromosome 6 Contains the 3
             'end of gene FLJ30162, a novel gene, the 5'end of gene
             KIAA0576, the 3' end of a novel gene and a CpG island,
             complete sequence
          Length = 101666

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    taccccaaaggaaaagatt 71
             |||||||||||||||||||
Sbjct: 70570 taccccaaaggaaaagatt 70552
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>emb|AL596166.1| Listeria innocua Clip11262 complete genome, segment 4/12
          Length = 260050

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      aaaacaacatattattttc 21
              |||||||||||||||||||
Sbjct: 168837 aaaacaacatattattttc 168855
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>gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, complete sequence
          Length = 245991

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 9      acatattattttcatttct 27
              |||||||||||||||||||
Sbjct: 161718 acatattattttcatttct 161736
to top
>emb|CR857679.1| Pongo pygmaeus mRNA; cDNA DKFZp469D2017 (from clone DKFZp469D2017)
          Length = 4657

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    ccaaaacaacatattattt 19
            |||||||||||||||||||
Sbjct: 3985 ccaaaacaacatattattt 3967
to top
>gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, complete sequence
          Length = 153411

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    gcaggaaaagacaattact 51
             |||||||||||||||||||
Sbjct: 91552 gcaggaaaagacaattact 91534
to top
>gb|AC126474.6| Homo sapiens 12 BAC RP11-135F9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 63940

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     acatattattttcatttct 27
             |||||||||||||||||||
Sbjct: 13777 acatattattttcatttct 13795
to top
>gb|AC145202.24| Medicago truncatula clone mth2-15e9, complete sequence
          Length = 89293

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     caacatattattttcattt 25
             |||||||||||||||||||
Sbjct: 62401 caacatattattttcattt 62383
to top
>gb|AC119037.6| Homo sapiens 3 BAC RP11-495D2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 200182

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 39     aaagacaattactttaccccaaaggaa 65
              ||||| |||||||||||| ||||||||
Sbjct: 153280 aaagaaaattactttaccacaaaggaa 153254
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>gb|AC117426.3| Homo sapiens 3 BAC RP11-130C13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 150601

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 39    aaagacaattactttaccccaaaggaa 65
             ||||| |||||||||||| ||||||||
Sbjct: 93001 aaagaaaattactttaccacaaaggaa 93027
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>gb|AC109351.3| Homo sapiens BAC clone RP11-417M17 from 4, complete sequence
          Length = 133157

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 3   aaaacaacatattattttcattt 25
           |||||| ||||||||||||||||
Sbjct: 238 aaaacagcatattattttcattt 260
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>gb|AE009963.1| Streptococcus pyogenes strain MGAS8232, section 11 of 173 of the
            complete genome
          Length = 11420

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 2    caaaacaacatattatttt 20
            |||||||||||||||||||
Sbjct: 4672 caaaacaacatattatttt 4690
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>gb|AC091931.2| Homo sapiens chromosome 5 clone RP11-313L6, complete sequence
          Length = 185844

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     aaggaaaagattggaacaa 78
              |||||||||||||||||||
Sbjct: 176128 aaggaaaagattggaacaa 176110
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>gb|AC016994.8| Homo sapiens BAC clone RP11-19J8 from 2, complete sequence
          Length = 48827

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     aaaacaacatattattttc 21
             |||||||||||||||||||
Sbjct: 15533 aaaacaacatattattttc 15551
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>ref|NM_199770.1| Danio rerio ankyrin repeat and SOCS box-containing 8 (asb8), mRNA
          Length = 1963

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 2    caaaacaacatattatttt 20
            |||||||||||||||||||
Sbjct: 1492 caaaacaacatattatttt 1510
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>gb|AC093608.3| Homo sapiens BAC clone RP11-700C8 from 4, complete sequence
          Length = 162015

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      aaaacaacatattattttcattt 25
              |||||| ||||||||||||||||
Sbjct: 160253 aaaacagcatattattttcattt 160275
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>gb|AC020661.8| Homo sapiens chromosome 15 clone RP11-540O11 map 15q15, complete
             sequence
          Length = 191655

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     acatattattttcatttct 27
             |||||||||||||||||||
Sbjct: 18341 acatattattttcatttct 18359
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>gb|AC154495.2| Mus musculus BAC clone RP24-111M22 from chromosome 12, complete
             sequence
          Length = 181538

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    ctttaccccaaaggaaaag 68
             |||||||||||||||||||
Sbjct: 16451 ctttaccccaaaggaaaag 16469
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>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete sequence
          Length = 133079

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 58     caaaggaaaagattggaacaaaa 80
              |||| ||||||||||||||||||
Sbjct: 131227 caaatgaaaagattggaacaaaa 131249
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>gb|AC155231.2| Mus musculus BAC clone RP24-336I23 from chromosome 12, complete
             sequence
          Length = 175296

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    ctttaccccaaaggaaaag 68
             |||||||||||||||||||
Sbjct: 49783 ctttaccccaaaggaaaag 49765
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>gb|AC016566.6| Homo sapiens chromosome 5 clone CTC-547G6, complete sequence
          Length = 170545

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    aaggaaaagattggaacaa 78
             |||||||||||||||||||
Sbjct: 23130 aaggaaaagattggaacaa 23112
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>gb|AC025166.7|AC025166 Homo sapiens chromosome 15 clone CTD-2129N1 map 15q15, complete
             sequence
          Length = 115793

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     acatattattttcatttct 27
             |||||||||||||||||||
Sbjct: 90868 acatattattttcatttct 90886
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>gb|AY905522.1| Streptococcus pyogenes strain D821 Nra (nra) gene, complete cds
          Length = 1536

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   caaaacaacatattatttt 20
           |||||||||||||||||||
Sbjct: 244 caaaacaacatattatttt 226
to top
>gb|AY905521.1| Streptococcus pyogenes strain D633 Nra (nra) gene, complete cds
          Length = 1536

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   caaaacaacatattatttt 20
           |||||||||||||||||||
Sbjct: 244 caaaacaacatattatttt 226
to top
>gb|AY905520.1| Streptococcus pyogenes strain D502 Nra (nra) gene, complete cds
          Length = 1536

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   caaaacaacatattatttt 20
           |||||||||||||||||||
Sbjct: 244 caaaacaacatattatttt 226
to top
>gb|AY905519.1| Streptococcus pyogenes strain ALAB49 Nra (nra) gene, complete cds
          Length = 1536

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   caaaacaacatattatttt 20
           |||||||||||||||||||
Sbjct: 244 caaaacaacatattatttt 226
to top
>gb|AY905518.1| Streptococcus pyogenes strain A946 Nra (nra) gene, complete cds
          Length = 1536

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   caaaacaacatattatttt 20
           |||||||||||||||||||
Sbjct: 244 caaaacaacatattatttt 226
to top
>gb|AY905517.1| Streptococcus pyogenes strain 29689 Nra (nra) gene, complete cds
          Length = 1536

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   caaaacaacatattatttt 20
           |||||||||||||||||||
Sbjct: 244 caaaacaacatattatttt 226
to top
>gb|AY905516.1| Streptococcus pyogenes strain 29487 Nra (nra) gene, complete cds
          Length = 1536

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   caaaacaacatattatttt 20
           |||||||||||||||||||
Sbjct: 244 caaaacaacatattatttt 226
to top
>gb|AY905515.1| Streptococcus pyogenes strain 88-019 Nra (nra) gene, complete cds
          Length = 1536

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   caaaacaacatattatttt 20
           |||||||||||||||||||
Sbjct: 244 caaaacaacatattatttt 226
to top
>emb|BX324205.5| Zebrafish DNA sequence from clone CH211-10K1 in linkage group 14,
             complete sequence
          Length = 168546

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 3     aaaacaacatattattttcatttctga 29
             |||||| ||||||||||| ||||||||
Sbjct: 36281 aaaacagcatattatttttatttctga 36255
to top
>gb|AC018710.4|AC018710 Homo sapiens BAC clone RP11-296L20 from 4, complete sequence
          Length = 197236

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    atattattttcatttctga 29
             |||||||||||||||||||
Sbjct: 80880 atattattttcatttctga 80898
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>emb|AJ634156.1| Agrostemma githago partial rpc2 gene for RNA Polymerase III, exon
           32, clone 1471
          Length = 954

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   caaaacaacatattatttt 20
           |||||||||||||||||||
Sbjct: 715 caaaacaacatattatttt 697
to top
>emb|AJ634155.1| Agrostemma githago partial rpc2 gene for RNA Polymerase III, exon 32,
            clone 1470
          Length = 1269

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 2    caaaacaacatattatttt 20
            |||||||||||||||||||
Sbjct: 1030 caaaacaacatattatttt 1012
to top
>emb|BX324116.7| Zebrafish DNA sequence from clone CH211-114G7 in linkage group 14,
              complete sequence
          Length = 167388

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 3      aaaacaacatattattttcatttctga 29
              |||||| ||||||||||| ||||||||
Sbjct: 100725 aaaacagcatattatttttatttctga 100699
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 66      aagattggaacaaaacaaa 84
               |||||||||||||||||||
Sbjct: 1416560 aagattggaacaaaacaaa 1416578
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 63       gaaaagattggaacaaaac 81
                |||||||||||||||||||
Sbjct: 27169050 gaaaagattggaacaaaac 27169032
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>gb|AC126321.1| Polypterus bichir, clone -22F22, complete sequence
          Length = 151602

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 71   tggaacaaaacaaatcctt 89
            |||||||||||||||||||
Sbjct: 4870 tggaacaaaacaaatcctt 4888
to top
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      caaaacaacatattatttt 20
              |||||||||||||||||||
Sbjct: 117056 caaaacaacatattatttt 117074
to top
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    gaaaagattggaacaaaac 81
             |||||||||||||||||||
Sbjct: 65499 gaaaagattggaacaaaac 65481
to top
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684A08
          Length = 137841

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    gaaaagattggaacaaaac 81
             |||||||||||||||||||
Sbjct: 19721 gaaaagattggaacaaaac 19703
to top
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      caaaacaacatattatttt 20
              |||||||||||||||||||
Sbjct: 111071 caaaacaacatattatttt 111089
to top
>gb|AC011422.2|AC011422 Homo sapiens chromosome 5 clone CTD-2335E17, complete sequence
          Length = 119668

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     ccaaaacaacatattattt 19
             |||||||||||||||||||
Sbjct: 79385 ccaaaacaacatattattt 79403
to top
>dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1512_E04
          Length = 157848

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    aagattggaacaaaacaaa 84
             |||||||||||||||||||
Sbjct: 34673 aagattggaacaaaacaaa 34691
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>emb|AJ554968.1|HIM554968 Human immunodeficiency virus type 1 proviral partial env gene for
           gp120 protein, V3V5 sequence, isolate 98CM.K1183
          Length = 616

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 61  aggaaaagattggaacaaaacaa 83
           ||||||| |||||||||||||||
Sbjct: 258 aggaaaacattggaacaaaacaa 280
to top
>emb|BX470205.12| Zebrafish DNA sequence from clone DKEYP-118B7 in linkage group 9,
             complete sequence
          Length = 41140

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    tgcaaccaaacaaaaaagg 116
             |||||||||||||||||||
Sbjct: 26877 tgcaaccaaacaaaaaagg 26895
to top
>gb|U49397.1|SPU49397 Streptococcus pyogenes MsmR (msmR) gene, partial cds; LepA (lepA),
            Cpa (cpa), and Nra (nra) genes, complete cds; SsbA (ssbA)
            gene, partial cds; and unknown genes
          Length = 10826

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 2    caaaacaacatattatttt 20
            |||||||||||||||||||
Sbjct: 6606 caaaacaacatattatttt 6588
to top
>dbj|AP003127.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-710G6, complete
              sequences
          Length = 161238

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 2      caaaacaacatattattttcatt 24
              ||||||||||| |||||||||||
Sbjct: 156621 caaaacaacatcttattttcatt 156643
to top
>dbj|AP001034.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-729B4, complete
             sequence
          Length = 167934

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 2     caaaacaacatattattttcatt 24
             ||||||||||| |||||||||||
Sbjct: 45741 caaaacaacatcttattttcatt 45763
to top
>gb|AC100967.15| Mus musculus chromosome 5, clone RP23-74L20, complete sequence
          Length = 229660

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     gtttgcaaccaaacaaaaa 113
              |||||||||||||||||||
Sbjct: 112114 gtttgcaaccaaacaaaaa 112096
to top
>emb|AL672273.9| Mouse DNA sequence from clone RP23-15A12 on chromosome 2, complete
              sequence
          Length = 202965

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 57     ccaaaggaaaagattggaa 75
              |||||||||||||||||||
Sbjct: 180453 ccaaaggaaaagattggaa 180435
to top
>gb|L29063.1|YSAFAS2A Candida albicans fatty acid synthase alpha subunit (FAS2) gene,
            complete cds
          Length = 6072

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 64   aaaagattggaacaaaacaaatc 86
            |||||||||||||||| ||||||
Sbjct: 4552 aaaagattggaacaaatcaaatc 4574
to top
>dbj|AP003691.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1594B3, complete
              sequence
          Length = 157952

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 33     gcaggaaaagacaattact 51
              |||||||||||||||||||
Sbjct: 139502 gcaggaaaagacaattact 139520


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,364,458
Number of Sequences: 3902068
Number of extensions: 3364458
Number of successful extensions: 246063
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 245553
Number of HSP's gapped (non-prelim): 510
length of query: 131
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 110
effective length of database: 17,151,101,840
effective search space: 1886621202400
effective search space used: 1886621202400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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