ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart54h06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106317.1| Zea mays PCO101473 mRNA sequence Length = 827 Score = 186 bits (94), Expect = 3e-44 Identities = 130/142 (91%) Strand = Plus / Minus Query: 214 tagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccg 273 ||||| |||||||| | |||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 541 tagccaatgtagtagagggggtcaggcagcttgaaggtgcgcgcgccctccggcgcgccg 482 Query: 274 aggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagc 333 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 481 aggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctggagc 422 Query: 334 ttctgcctctcgccggacttgt 355 ||||| | |||||||||||||| Sbjct: 421 ttctggcgctcgccggacttgt 400
>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase Length = 2748 Score = 174 bits (88), Expect = 1e-40 Identities = 130/144 (90%) Strand = Plus / Minus Query: 212 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 271 ||||| ||||||||||||||||||| ||| | |||||||||| || ||||| ||||||| Sbjct: 2618 cctaggcgatgtagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgc 2559 Query: 272 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 331 ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| || Sbjct: 2558 cgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcatcctcca 2499 Query: 332 gcttctgcctctcgccggacttgt 355 |||||| ||||||| ||||||||| Sbjct: 2498 gcttcttcctctcggcggacttgt 2475
>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3 gene) Length = 1152 Score = 174 bits (88), Expect = 1e-40 Identities = 130/144 (90%) Strand = Plus / Minus Query: 212 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 271 ||||| ||||||||||||||||||| ||| | |||||||||| || ||||| ||||||| Sbjct: 1022 cctaggcgatgtagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgc 963 Query: 272 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 331 ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| || Sbjct: 962 cgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcatcctcca 903 Query: 332 gcttctgcctctcgccggacttgt 355 |||||| ||||||| ||||||||| Sbjct: 902 gcttcttcctctcggcggacttgt 879
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 165 bits (83), Expect = 1e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 212 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 271 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 89814 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 89873 Query: 272 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 331 |||||||||||||||||||||| |||||||||||||||||| | ||||| |||| || Sbjct: 89874 cgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcca 89933 Query: 332 gcttctgcctctcgccggacttg 354 ||||||||| ||||||||||||| Sbjct: 89934 gcttctgccgctcgccggacttg 89956 Score = 159 bits (80), Expect = 7e-36 Identities = 122/136 (89%) Strand = Plus / Plus Query: 220 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 279 |||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 80220 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 80279 Query: 280 tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 339 || ||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 80280 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 80339 Query: 340 ctctcgccggacttgt 355 | |||||||||||||| Sbjct: 80340 cgctcgccggacttgt 80355 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 212 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 271 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 90313 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 90372 Query: 272 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 331 |||||||||||||||||||||| |||||||||||||| ||| | ||||| |||| || Sbjct: 90373 cgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcca 90432 Query: 332 gcttctgcctctcgccggacttg 354 ||||||||| ||||||||||||| Sbjct: 90433 gcttctgccgctcgccggacttg 90455 Score = 127 bits (64), Expect = 3e-26 Identities = 124/144 (86%) Strand = Plus / Plus Query: 212 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 271 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 104198 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 104257 Query: 272 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 331 |||||||||| ||||| ||||| || |||||||||| |||| | ||||| |||| || Sbjct: 104258 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 104317 Query: 332 gcttctgcctctcgccggacttgt 355 |||| |||| |||||||||||||| Sbjct: 104318 gcttttgccgctcgccggacttgt 104341 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Plus Query: 271 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 324 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 5307 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5360
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 165 bits (83), Expect = 1e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 212 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 271 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 5556605 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 5556664 Query: 272 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 331 |||||||||||||||||||||| |||||||||||||||||| | ||||| |||| || Sbjct: 5556665 cgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcca 5556724 Query: 332 gcttctgcctctcgccggacttg 354 ||||||||| ||||||||||||| Sbjct: 5556725 gcttctgccgctcgccggacttg 5556747 Score = 159 bits (80), Expect = 7e-36 Identities = 122/136 (89%) Strand = Plus / Plus Query: 220 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 279 |||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 5547011 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 5547070 Query: 280 tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 339 || ||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 5547071 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 5547130 Query: 340 ctctcgccggacttgt 355 | |||||||||||||| Sbjct: 5547131 cgctcgccggacttgt 5547146 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 212 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 271 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 5557104 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 5557163 Query: 272 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 331 |||||||||||||||||||||| |||||||||||||| ||| | ||||| |||| || Sbjct: 5557164 cgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcca 5557223 Query: 332 gcttctgcctctcgccggacttg 354 ||||||||| ||||||||||||| Sbjct: 5557224 gcttctgccgctcgccggacttg 5557246 Score = 127 bits (64), Expect = 3e-26 Identities = 124/144 (86%) Strand = Plus / Plus Query: 212 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 271 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 5570989 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 5571048 Query: 272 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 331 |||||||||| ||||| ||||| || |||||||||| |||| | ||||| |||| || Sbjct: 5571049 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 5571108 Query: 332 gcttctgcctctcgccggacttgt 355 |||| |||| |||||||||||||| Sbjct: 5571109 gcttttgccgctcgccggacttgt 5571132 Score = 81.8 bits (41), Expect = 1e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 241 agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 300 ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 5399395 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 5399454 Query: 301 ttaccgacgatgacata 317 |||||||| ||| |||| Sbjct: 5399455 ttaccgacaatggcata 5399471 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Plus Query: 271 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 324 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 5472098 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5472151 Score = 69.9 bits (35), Expect = 5e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 223 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 282 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 5416590 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 5416649 Query: 283 ctccactggtcgccgatgttaccgacgatga 313 ||||||||||||| ||||| |||||||||| Sbjct: 5416650 ttccactggtcgccaatgttgccgacgatga 5416680 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 273 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 323 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 5452349 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 5452399 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 302 ||||||||| | |||||||||| |||||||||||| |||||||| Sbjct: 5459713 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 5459756 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 gtcgctccactggtcgccgatgttaccga 307 ||||||||||||||| |||||||| |||| Sbjct: 5428951 gtcgctccactggtcaccgatgttgccga 5428979
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 161 bits (81), Expect = 2e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 207 ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 266 |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 16055858 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 16055799 Query: 267 cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 326 || || | |||||| ||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 16055798 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 16055739 Query: 327 ctgcagcttctgcctctcgccggacttgt 355 |||||||||||| | |||||||||||||| Sbjct: 16055738 ctgcagcttctgacgctcgccggacttgt 16055710 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ttctgcctctcgccggactt 353 |||||||||||||||||||| Sbjct: 25973349 ttctgcctctcgccggactt 25973330 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ttctgcctctcgccggactt 353 |||||||||||||||||||| Sbjct: 25938072 ttctgcctctcgccggactt 25938091
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F09 Length = 166568 Score = 161 bits (81), Expect = 2e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 207 ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 266 |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 26191 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 26132 Query: 267 cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 326 || || | |||||| ||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 26131 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 26072 Query: 327 ctgcagcttctgcctctcgccggacttgt 355 |||||||||||| | |||||||||||||| Sbjct: 26071 ctgcagcttctgacgctcgccggacttgt 26043
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 161 bits (81), Expect = 2e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 207 ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 266 |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 137260 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 137201 Query: 267 cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 326 || || | |||||| ||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 137200 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 137141 Query: 327 ctgcagcttctgcctctcgccggacttgt 355 |||||||||||| | |||||||||||||| Sbjct: 137140 ctgcagcttctgacgctcgccggacttgt 137112
>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full insert sequence Length = 1076 Score = 159 bits (80), Expect = 7e-36 Identities = 122/136 (89%) Strand = Plus / Minus Query: 220 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 279 |||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 903 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 844 Query: 280 tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 339 || ||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 843 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 784 Query: 340 ctctcgccggacttgt 355 | |||||||||||||| Sbjct: 783 cgctcgccggacttgt 768
>ref|XM_477966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 157 bits (79), Expect = 3e-35 Identities = 127/143 (88%) Strand = Plus / Minus Query: 213 ctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgcc 272 |||||||||||||||||||||||| ||||||||||||||||| || ||||| || || || Sbjct: 411 ctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtgcacc 352 Query: 273 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcag 332 | |||||| ||||||||||| ||||||||||||||||||| | |||||||||||||| Sbjct: 351 caagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcctgcag 292 Query: 333 cttctgcctctcgccggacttgt 355 |||||| | |||||||||||||| Sbjct: 291 cttctgacgctcgccggacttgt 269
>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full insert sequence Length = 1131 Score = 127 bits (64), Expect = 3e-26 Identities = 124/144 (86%) Strand = Plus / Minus Query: 212 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 271 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 885 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 826 Query: 272 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 331 |||||||||| ||||| ||||| || |||||||||| |||| | ||||| |||| || Sbjct: 825 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 766 Query: 332 gcttctgcctctcgccggacttgt 355 |||| |||| |||||||||||||| Sbjct: 765 gcttttgccgctcgccggacttgt 742
>dbj|AK119190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H02, full insert sequence Length = 1112 Score = 99.6 bits (50), Expect = 6e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 318 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 319 ccggcgtcctgcagcttctgcc 340 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK106112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D12, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 6e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 318 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 319 ccggcgtcctgcagcttctgcc 340 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H04, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 6e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 318 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 319 ccggcgtcctgcagcttctgcc 340 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104267.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H12, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 6e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 318 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 319 ccggcgtcctgcagcttctgcc 340 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104252.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A07, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 6e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 318 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 319 ccggcgtcctgcagcttctgcc 340 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104180.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H06, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 6e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 318 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 319 ccggcgtcctgcagcttctgcc 340 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK061507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F05, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 6e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 318 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 319 ccggcgtcctgcagcttctgcc 340 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 99.6 bits (50), Expect = 6e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 318 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 32795 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 32854 Query: 319 ccggcgtcctgcagcttctgcc 340 ||||||||| |||||||||| Sbjct: 32855 ccggcgtccacaagcttctgcc 32876 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 273 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 323 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 6680 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 6730 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 302 ||||||||| | |||||||||| |||||||||||| |||||||| Sbjct: 14044 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 14087
>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0023G10, complete sequence Length = 36253 Score = 99.6 bits (50), Expect = 6e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 318 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 6415 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 6474 Query: 319 ccggcgtcctgcagcttctgcc 340 ||||||||| |||||||||| Sbjct: 6475 ccggcgtccacaagcttctgcc 6496 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Plus Query: 271 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 324 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 25538 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 25591
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 81.8 bits (41), Expect = 1e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 241 agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 300 ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 86069 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 86128 Query: 301 ttaccgacgatgacata 317 |||||||| ||| |||| Sbjct: 86129 ttaccgacaatggcata 86145 Score = 69.9 bits (35), Expect = 5e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 223 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 282 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 103264 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 103323 Query: 283 ctccactggtcgccgatgttaccgacgatga 313 ||||||||||||| ||||| |||||||||| Sbjct: 103324 ttccactggtcgccaatgttgccgacgatga 103354 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 273 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 323 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 139023 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 139073 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 259 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 302 ||||||||| | |||||||||| |||||||||||| |||||||| Sbjct: 146387 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 146430 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 gtcgctccactggtcgccgatgttaccga 307 ||||||||||||||| |||||||| |||| Sbjct: 115625 gtcgctccactggtcaccgatgttgccga 115653
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 81.8 bits (41), Expect = 1e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 241 agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 300 ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 84909 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 84968 Query: 301 ttaccgacgatgacata 317 |||||||| ||| |||| Sbjct: 84969 ttaccgacaatggcata 84985 Score = 69.9 bits (35), Expect = 5e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 223 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 282 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 102104 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 102163 Query: 283 ctccactggtcgccgatgttaccgacgatga 313 ||||||||||||| ||||| |||||||||| Sbjct: 102164 ttccactggtcgccaatgttgccgacgatga 102194
>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full insert sequence Length = 1168 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 271 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 324 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full insert sequence Length = 1081 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 271 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 324 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full insert sequence Length = 1081 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 271 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 324 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full insert sequence Length = 1081 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 271 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 324 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full insert sequence Length = 1096 Score = 75.8 bits (38), Expect = 9e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 271 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 324 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104624.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A08, full insert sequence Length = 1051 Score = 69.9 bits (35), Expect = 5e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 223 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 282 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 794 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 735 Query: 283 ctccactggtcgccgatgttaccgacgatga 313 ||||||||||||| ||||| |||||||||| Sbjct: 734 ttccactggtcgccaatgttgccgacgatga 704
>dbj|AK104203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C10, full insert sequence Length = 1053 Score = 69.9 bits (35), Expect = 5e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 223 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 282 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 796 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 737 Query: 283 ctccactggtcgccgatgttaccgacgatga 313 ||||||||||||| ||||| |||||||||| Sbjct: 736 ttccactggtcgccaatgttgccgacgatga 706
>dbj|AK067327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099D13, full insert sequence Length = 1059 Score = 69.9 bits (35), Expect = 5e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 223 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 282 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 802 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 743 Query: 283 ctccactggtcgccgatgttaccgacgatga 313 ||||||||||||| ||||| |||||||||| Sbjct: 742 ttccactggtcgccaatgttgccgacgatga 712
>dbj|AK060874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A01, full insert sequence Length = 1074 Score = 69.9 bits (35), Expect = 5e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 223 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 282 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 795 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 736 Query: 283 ctccactggtcgccgatgttaccgacgatga 313 ||||||||||||| ||||| |||||||||| Sbjct: 735 ttccactggtcgccaatgttgccgacgatga 705
>ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 232 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 291 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 821 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 762 Query: 292 tcgccgatgttaccga 307 ||||||||||| |||| Sbjct: 761 tcgccgatgttgccga 746
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 232 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 291 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 4871431 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 4871490 Query: 292 tcgccgatgttaccga 307 ||||||||||| |||| Sbjct: 4871491 tcgccgatgttgccga 4871506
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 232 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 291 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 116080 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 116139 Query: 292 tcgccgatgttaccga 307 ||||||||||| |||| Sbjct: 116140 tcgccgatgttgccga 116155
>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full insert sequence Length = 1095 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 232 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 291 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 292 tcgccgatgttaccga 307 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full insert sequence Length = 1094 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 232 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 291 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 843 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 784 Query: 292 tcgccgatgttaccga 307 ||||||||||| |||| Sbjct: 783 tcgccgatgttgccga 768
>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full insert sequence Length = 1095 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 232 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 291 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 292 tcgccgatgttaccga 307 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full insert sequence Length = 1308 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 232 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 291 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 1057 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 998 Query: 292 tcgccgatgttaccga 307 ||||||||||| |||| Sbjct: 997 tcgccgatgttgccga 982
>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full insert sequence Length = 1095 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 232 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 291 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 292 tcgccgatgttaccga 307 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full insert sequence Length = 1114 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 232 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 291 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 292 tcgccgatgttaccga 307 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full insert sequence Length = 1100 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 273 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 323 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 760 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 710
>ref|XM_366443.1| Magnaporthe grisea 70-15 hypothetical protein (MG10661.4) partial mRNA Length = 840 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 270 gccgaggatgtcgctccactggtcgccgatgtt 302 ||||| || ||||||||||||| |||||||||| Sbjct: 696 gccgaagaagtcgctccactgggcgccgatgtt 664
>ref|NM_193052.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1491 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ttctgcctctcgccggactt 353 |||||||||||||||||||| Sbjct: 739 ttctgcctctcgccggactt 758
>ref|NM_193043.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ttctgcctctcgccggactt 353 |||||||||||||||||||| Sbjct: 1204 ttctgcctctcgccggactt 1223
>gb|AC118201.8| Mus musculus chromosome 7, clone RP23-339M11, complete sequence Length = 194241 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 caagctctcaacaatggaaa 100 |||||||||||||||||||| Sbjct: 189390 caagctctcaacaatggaaa 189371
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 tcctgcagcttctgcctctc 344 |||||||||||||||||||| Sbjct: 108648 tcctgcagcttctgcctctc 108629
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gtcgctccactggtcgccga 298 |||||||||||||||||||| Sbjct: 12244752 gtcgctccactggtcgccga 12244771
>gb|AC158213.4| Mus musculus chromosome 7, clone RP24-253H20, complete sequence Length = 175873 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 caagctctcaacaatggaaa 100 |||||||||||||||||||| Sbjct: 27587 caagctctcaacaatggaaa 27568
>gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174576 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 agctctcaacaatggaaatg 102 |||||||||||||||||||| Sbjct: 45528 agctctcaacaatggaaatg 45547
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 235 tcgggcagcttgaaggtgcgggcaccct 262 |||||||||||||||| |||||| |||| Sbjct: 1551158 tcgggcagcttgaaggcgcgggcgccct 1551185
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 taattcatagtagcaattaa 77 |||||||||||||||||||| Sbjct: 22025728 taattcatagtagcaattaa 22025709
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gtcgctccactggtcgccga 298 |||||||||||||||||||| Sbjct: 12241515 gtcgctccactggtcgccga 12241534
>gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds Length = 2310 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gtcgctccactggtcgccga 298 |||||||||||||||||||| Sbjct: 94 gtcgctccactggtcgccga 75
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gtcgctccactggtcgccga 298 |||||||||||||||||||| Sbjct: 14285 gtcgctccactggtcgccga 14304
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ttattcgaaaaatcaatggc 185 |||||||||||||||||||| Sbjct: 3460620 ttattcgaaaaatcaatggc 3460601
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ttctgcctctcgccggactt 353 |||||||||||||||||||| Sbjct: 50361 ttctgcctctcgccggactt 50342 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ttctgcctctcgccggactt 353 |||||||||||||||||||| Sbjct: 15084 ttctgcctctcgccggactt 15103
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ttctgcctctcgccggactt 353 |||||||||||||||||||| Sbjct: 6911 ttctgcctctcgccggactt 6892
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ttctgcctctcgccggactt 353 |||||||||||||||||||| Sbjct: 108520 ttctgcctctcgccggactt 108539
>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence Length = 124367 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 cggcgtcctgcagcttctgcctct 343 ||||||||||||||| |||||||| Sbjct: 10487 cggcgtcctgcagctgctgcctct 10464
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 taattcatagtagcaattaa 77 |||||||||||||||||||| Sbjct: 21954073 taattcatagtagcaattaa 21954054
>emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa0062E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138308 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 taattcatagtagcaattaa 77 |||||||||||||||||||| Sbjct: 131856 taattcatagtagcaattaa 131837 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,449,660 Number of Sequences: 3902068 Number of extensions: 2449660 Number of successful extensions: 47500 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47133 Number of HSP's gapped (non-prelim): 357 length of query: 355 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 333 effective length of database: 17,147,199,772 effective search space: 5710017524076 effective search space used: 5710017524076 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
