Clone Name | rbart54h03 |
---|---|
Clone Library Name | barley_pub |
>emb|BX000452.7| Zebrafish DNA sequence from clone DKEY-12J12 in linkage group 14, complete sequence Length = 220420 Score = 42.1 bits (21), Expect = 0.097 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 aaaacttaccaaaattattta 29 ||||||||||||||||||||| Sbjct: 30989 aaaacttaccaaaattattta 31009
>emb|AL138926.13| Human DNA sequence from clone RP11-173E24 on chromosome 1q31.1-31.3, complete sequence Length = 169162 Score = 40.1 bits (20), Expect = 0.38 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 cttaccaaaattatttattt 32 |||||||||||||||||||| Sbjct: 116566 cttaccaaaattatttattt 116585
>ref|XM_640789.1| Dictyostelium discoideum hypothetical protein (DDB0190180), partial mRNA Length = 3423 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 1969 ttaccaaaattatttattt 1987
>gb|AC186553.1| Pan troglodytes chromosome 6 clone CH251-664D19, complete sequence Length = 214787 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 100711 ttaccaaaattatttattt 100693
>gb|AC183596.2| Pan troglodytes BAC clone CH251-679I13 from chromosome 6, complete sequence Length = 214528 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 25342 ttaccaaaattatttattt 25360
>gb|AC105446.4| Homo sapiens BAC clone RP11-395B7 from 7, complete sequence Length = 139517 Score = 38.2 bits (19), Expect = 1.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaattattta 29 ||||||||||| ||||||||||| Sbjct: 93007 aaaaaacttacaaaaattattta 93029
>emb|AL109922.9|HSDJ401P4 Human DNA sequence from clone RP3-401P4 on chromosome 6q11.2-12 Contains part of the gene for a novel EGF-like domain containing protein, complete sequence Length = 94585 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 93788 ttaccaaaattatttattt 93770
>emb|BX029427.1|CNS08UVB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43DH04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 945 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 taaaaaacttaccaaaatt 24 ||||||||||||||||||| Sbjct: 61 taaaaaacttaccaaaatt 43
>emb|CR388171.5| Zebrafish DNA sequence from clone CH211-261O7, complete sequence Length = 145218 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 82213 ttaccaaaattatttattt 82231
>emb|Z33013.1|MC010 M.capricolum DNA for CONTIG MC010 Length = 1904 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatta 25 ||||||||||||||||||| Sbjct: 74 aaaaaacttaccaaaatta 56
>gb|AC182732.2| Pan troglodytes BAC clone CH251-716H13 from chromosome 6, complete sequence Length = 172310 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 83300 ttaccaaaattatttattt 83282
>gb|AC183106.3| Pan troglodytes BAC clone CH251-522A15 from chromosome 6, complete sequence Length = 173865 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 155634 ttaccaaaattatttattt 155652
>gb|AC182399.3| Pan troglodytes BAC clone CH251-19C24 from chromosome 6, complete sequence Length = 226479 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 82328 ttaccaaaattatttattt 82346
>gb|AC024946.13| Homo sapiens chromosome 10 clone RP11-138M8, complete sequence Length = 155580 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 aaaacttaccaaaattatt 27 ||||||||||||||||||| Sbjct: 6541 aaaacttaccaaaattatt 6523
>gb|AC024597.8| Homo sapiens chromosome 10 clone RP11-120C12, complete sequence Length = 155580 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 aaaacttaccaaaattatt 27 ||||||||||||||||||| Sbjct: 149040 aaaacttaccaaaattatt 149058
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatta 25 ||||||||||||||||||| Sbjct: 931890 aaaaaacttaccaaaatta 931908
>emb|BX465840.13| Zebrafish DNA sequence from clone DKEY-239J18 in linkage group 12, complete sequence Length = 108855 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 98009 ttaccaaaattatttattt 98027
>emb|BX004888.9| Zebrafish DNA sequence from clone DKEY-8F21 in linkage group 1, complete sequence Length = 219280 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 aaaaacttaccaaaattat 26 ||||||||||||||||||| Sbjct: 156994 aaaaacttaccaaaattat 156976
>emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 in linkage group 15, complete sequence Length = 205794 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 183816 ttaccaaaattatttattt 183798
>emb|BX000987.6| Zebrafish DNA sequence from clone CH211-130P10 in linkage group 15, complete sequence Length = 152072 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 96873 ttaccaaaattatttattt 96891
>emb|BX005217.5| Zebrafish DNA sequence from clone CH211-87L3 in linkage group 15, complete sequence Length = 154452 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 ttaccaaaattatttattt 32 ||||||||||||||||||| Sbjct: 76299 ttaccaaaattatttattt 76317
>emb|AL845332.11| Mouse DNA sequence from clone RP23-326D18 on chromosome 2, complete sequence Length = 200453 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 taaaaaacttaccaaaatt 24 ||||||||||||||||||| Sbjct: 27936 taaaaaacttaccaaaatt 27954
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 aaaaacttaccaaaattattta 29 ||||||| |||||||||||||| Sbjct: 985307 aaaaactaaccaaaattattta 985328
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 9719 aaaaaacttaccaaaatt 9736
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 119987 aaaaaacttaccaaaatt 120004
>gb|AY020558.1| Oryza sativa microsatellite MRG2883 containing (GT)X13, closest to marker C136, genomic sequence Length = 226 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 191 aaaaaacttaccaaaatt 174
>gb|AY019211.1| Oryza sativa microsatellite MRG1536 containing (AT)X29, closest to marker S2014, genomic sequence Length = 258 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 249 aaaaaacttaccaaaatt 232
>gb|AF003135.3| Caenorhabditis elegans cosmid W03F11, complete sequence Length = 81587 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 4279 aaaaaacttaccaaaatt 4262
>gb|AY531120.1| Crocidura suaveolens microsatellite CS40 sequence Length = 604 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ataaaaaacttaccaaaa 22 |||||||||||||||||| Sbjct: 150 ataaaaaacttaccaaaa 133
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 37970 aaaaaacttaccaaaatt 37987
>gb|AC137980.4| Mus musculus BAC clone RP24-69K24 from chromosome 9, complete sequence Length = 221263 Score = 36.2 bits (18), Expect = 6.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 6 taaaaaacttaccaaaattatttatt 31 |||||||||||| ||| ||||||||| Sbjct: 83680 taaaaaacttactaaatttatttatt 83705
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 8523 aaaaaacttaccaaaatt 8540
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 aaacttaccaaaattatt 27 |||||||||||||||||| Sbjct: 127691 aaacttaccaaaattatt 127674
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 28854675 aaaaaacttaccaaaatt 28854692
>gb|AC084159.2| Caenorhabditis elegans cosmid Y73B3A, complete sequence Length = 122855 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 aaaaacttaccaaaatta 25 |||||||||||||||||| Sbjct: 92367 aaaaacttaccaaaatta 92384 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 aaaaacttaccaaaatta 25 |||||||||||||||||| Sbjct: 91723 aaaaacttaccaaaatta 91740 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 aaaaacttaccaaaatta 25 |||||||||||||||||| Sbjct: 89268 aaaaacttaccaaaatta 89251
>gb|AC137681.20| Mus musculus chromosome 14, clone RP23-460H20, complete sequence Length = 212261 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 11 aacttaccaaaattatttattt 32 ||||||||||| |||||||||| Sbjct: 98785 aacttaccaaagttatttattt 98806
>emb|Z83120.1|CER06A4 Caenorhabditis elegans Cosmid R06A4, complete sequence Length = 36633 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 aaaaacttaccaaaatta 25 |||||||||||||||||| Sbjct: 21150 aaaaacttaccaaaatta 21167 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 aaaaacttaccaaaatta 25 |||||||||||||||||| Sbjct: 18686 aaaaacttaccaaaatta 18669
>emb|Z80223.1|CEF26D10 Caenorhabditis elegans Cosmid F26D10, complete sequence Length = 36924 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 14637 aaaaaacttaccaaaatt 14620
>gb|AC117418.6| Homo sapiens 3 BAC RP11-14N19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 53666 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 ataaaaaacttaccaaaa 22 |||||||||||||||||| Sbjct: 20491 ataaaaaacttaccaaaa 20508
>gb|AC004161.1| Homo sapiens BAC clone CTA-208K23 from 7, complete sequence Length = 112237 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaattattt 28 ||||||||||| |||||||||| Sbjct: 85934 aaaaaacttactaaaattattt 85955
>gb|U41108.1| Caenorhabditis elegans cosmid C08D8, complete sequence Length = 19576 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaattattt 28 |||||||||| ||||||||||| Sbjct: 6141 aaaaaacttaacaaaattattt 6120
>emb|BX119320.11| Human DNA sequence from clone RP11-533O1 on chromosome 1, complete sequence Length = 68709 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 ataaaaaacttaccaaaa 22 |||||||||||||||||| Sbjct: 55938 ataaaaaacttaccaaaa 55955
>emb|AL391354.12| Human DNA sequence from clone RP11-418F17 on chromosome 13, complete sequence Length = 81246 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 15 taccaaaattatttattt 32 |||||||||||||||||| Sbjct: 59385 taccaaaattatttattt 59368
>emb|AL163544.24| Human DNA sequence from clone RP11-322A14 on chromosome 13, complete sequence Length = 60286 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 ataaaaaacttaccaaaa 22 |||||||||||||||||| Sbjct: 54978 ataaaaaacttaccaaaa 54995
>gb|AC097361.2| Homo sapiens chromosome 3 clone RP11-722P17, complete sequence Length = 175036 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ataaaaaacttaccaaaa 22 |||||||||||||||||| Sbjct: 48747 ataaaaaacttaccaaaa 48730
>emb|X12671.1|HSHNRNPA Human gene for heterogeneous nuclear ribonucleoprotein (hnRNP) core protein A1 Length = 5368 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 10 aaacttaccaaaattatttatt 31 ||||||||||||||| |||||| Sbjct: 2015 aaacttaccaaaattttttatt 2036
>emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 3/6 Length = 317511 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 aaaaacttaccaaaattattta 29 ||||||| |||||||||||||| Sbjct: 284587 aaaaactaaccaaaattattta 284608
>emb|AL132957.1|ATF24B22 Arabidopsis thaliana DNA chromosome 3, BAC clone F24B22 Length = 100285 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 taaaaaacttaccaaaat 23 |||||||||||||||||| Sbjct: 65449 taaaaaacttaccaaaat 65466
>emb|AL008970.3|PFMAL3P4 Plasmodium falciparum MAL3P4 Length = 113880 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 aaaaacttaccaaaatta 25 |||||||||||||||||| Sbjct: 90375 aaaaacttaccaaaatta 90392
>emb|BX927401.14| Zebrafish DNA sequence from clone CH211-210H11 in linkage group 19, complete sequence Length = 137958 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 70714 aaaaaacttaccaaaatt 70697
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 147044 aaaaaacttaccaaaatt 147061
>gb|AC117532.2| Homo sapiens chromosome 5 clone RP11-648M2, complete sequence Length = 177782 Score = 36.2 bits (18), Expect = 6.0 Identities = 24/26 (92%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaattatttattt 32 |||||||||| |||||||||||||| Sbjct: 20334 aaaaaacttaataaaattatttattt 20309
>gb|AC122177.2| Homo sapiens chromosome 3 clone RP11-411F11, complete sequence Length = 167908 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ataaaaaacttaccaaaa 22 |||||||||||||||||| Sbjct: 19348 ataaaaaacttaccaaaa 19331
>gb|AF067624.1| Caenorhabditis elegans cosmid M01B12, complete sequence Length = 34907 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 24560 aaaaaacttaccaaaatt 24543
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 aaaacttaccaaaattat 26 |||||||||||||||||| Sbjct: 1477005 aaaacttaccaaaattat 1477022
>gb|AC182841.2| Pan troglodytes BAC clone CH251-667I24 from chromosome 11, complete sequence Length = 189657 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 aacttaccaaaattattt 28 |||||||||||||||||| Sbjct: 180358 aacttaccaaaattattt 180341
>gb|AC092859.26| Pan troglodytes clone rp43-111m15, complete sequence Length = 175281 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 taccaaaattatttattt 32 |||||||||||||||||| Sbjct: 160800 taccaaaattatttattt 160817
>gb|AC114499.1| Homo sapiens BAC clone RP11-12J20 from 2, complete sequence Length = 31726 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 ttaccaaaattatttatt 31 |||||||||||||||||| Sbjct: 13779 ttaccaaaattatttatt 13762
>gb|AC091823.3| Homo sapiens chromosome 5 clone CTC-417G23, complete sequence Length = 134567 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaattattt 28 ||||||||||| |||||||||| Sbjct: 69095 aaaaaacttacaaaaattattt 69116
>emb|BX569789.4| Zebrafish DNA sequence from clone DKEY-68O6 in linkage group 3, complete sequence Length = 244662 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 15 taccaaaattatttattt 32 |||||||||||||||||| Sbjct: 193008 taccaaaattatttattt 192991
>emb|BX936360.5| Zebrafish DNA sequence from clone DKEY-5I18 in linkage group 18, complete sequence Length = 70821 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 15 taccaaaattatttattt 32 |||||||||||||||||| Sbjct: 14134 taccaaaattatttattt 14117
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 aaacttaccaaaattatt 27 |||||||||||||||||| Sbjct: 21058264 aaacttaccaaaattatt 21058281
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 aaacttaccaaaattatt 27 |||||||||||||||||| Sbjct: 2056136 aaacttaccaaaattatt 2056119
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 20160249 aaaaaacttaccaaaatt 20160266
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 8186852 aaaaaacttaccaaaatt 8186835
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 23322987 aaaaaacttaccaaaatt 23323004
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 28946097 aaaaaacttaccaaaatt 28946114
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 34289060 aaaaaacttaccaaaatt 34289043
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 aaacttaccaaaattatt 27 |||||||||||||||||| Sbjct: 16061584 aaacttaccaaaattatt 16061567
>gb|AC068129.6| Homo sapiens BAC clone RP11-619F9 from 2, complete sequence Length = 150646 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 cataaaaaacttaccaaa 21 |||||||||||||||||| Sbjct: 932 cataaaaaacttaccaaa 915
>gb|AC093389.6| Homo sapiens BAC clone RP11-669N23 from 2, complete sequence Length = 23273 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 cataaaaaacttaccaaa 21 |||||||||||||||||| Sbjct: 22205 cataaaaaacttaccaaa 22188
>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence Length = 405682 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 122188 aaaaaacttaccaaaatt 122205
>gb|AC140918.1| Caenorhabditis briggsae cosmid CB020L07, complete sequence Length = 104788 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 25026 aaaaaacttaccaaaatt 25043
>gb|AC078778.34| Homo sapiens 12 BAC RP11-968A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 141003 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 10 aaacttaccaaaattatttatt 31 ||||||||||||||| |||||| Sbjct: 87806 aaacttaccaaaattttttatt 87785
>gb|AC167564.1| Mus musculus BAC clone RP24-224G11 from chromosome 14, complete sequence Length = 204945 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 aacttaccaaaattatttattt 32 ||||||||||| |||||||||| Sbjct: 4459 aacttaccaaagttatttattt 4438
>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0091E23 Length = 155939 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 aaacttaccaaaattatt 27 |||||||||||||||||| Sbjct: 153169 aaacttaccaaaattatt 153152
>dbj|AP003854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0093M23 Length = 134578 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 aaacttaccaaaattatt 27 |||||||||||||||||| Sbjct: 17747 aaacttaccaaaattatt 17730
>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624H09 Length = 158719 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 79215 aaaaaacttaccaaaatt 79198
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 124333 aaaaaacttaccaaaatt 124316
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 26035 aaaaaacttaccaaaatt 26052
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1188_F05 Length = 117045 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 106795 aaaaaacttaccaaaatt 106812
>gb|L35321.2|DDMYOVII Dictyostelium discoideum class VII unconventional myosin (myoI) gene, complete cds Length = 7597 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 1497 aaaaaacttaccaaaatt 1480
>emb|CR753886.11| Zebrafish DNA sequence from clone DKEY-189E1 in linkage group 24, complete sequence Length = 142977 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 ataaaaaacttaccaaaa 22 |||||||||||||||||| Sbjct: 120914 ataaaaaacttaccaaaa 120931
>emb|BX548062.37| Zebrafish DNA sequence from clone CH211-223K23 in linkage group 20, complete sequence Length = 89039 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 9 aaaacttaccaaaattatttat 30 |||||||| ||||||||||||| Sbjct: 72163 aaaacttatcaaaattatttat 72184
>emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in linkage group 4, complete sequence Length = 229125 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 taccaaaattatttattt 32 |||||||||||||||||| Sbjct: 77329 taccaaaattatttattt 77346
>gb|AC107045.9| Mus musculus chromosome 1, clone RP23-334J7, complete sequence Length = 222700 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 ttaccaaaattatttatt 31 |||||||||||||||||| Sbjct: 50053 ttaccaaaattatttatt 50070
>gb|AC087079.1| Caenorhabditis elegans cosmid Y37E3, complete sequence Length = 106935 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 aaaaaacttaccaaaatt 24 |||||||||||||||||| Sbjct: 105014 aaaaaacttaccaaaatt 104997
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 aaacttaccaaaattatt 27 |||||||||||||||||| Sbjct: 2063917 aaacttaccaaaattatt 2063900
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 aaacttaccaaaattatt 27 |||||||||||||||||| Sbjct: 20984473 aaacttaccaaaattatt 20984490
>emb|AL928814.8| Zebrafish DNA sequence from clone CH211-149O12, complete sequence Length = 170669 Score = 36.2 bits (18), Expect = 6.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 5 ataaaaaacttaccaaaattat 26 ||||||||||||| |||||||| Sbjct: 132606 ataaaaaacttacaaaaattat 132627
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 aaacttaccaaaattatt 27 |||||||||||||||||| Sbjct: 143749 aaacttaccaaaattatt 143766
>emb|AL645545.8| Mouse DNA sequence from clone RP23-203J4 on chromosome X, complete sequence Length = 181243 Score = 36.2 bits (18), Expect = 6.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 taccaaaattatttattt 32 |||||||||||||||||| Sbjct: 150598 taccaaaattatttattt 150615 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 734,437 Number of Sequences: 3902068 Number of extensions: 734437 Number of successful extensions: 203677 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 202458 Number of HSP's gapped (non-prelim): 1219 length of query: 47 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 27 effective length of database: 17,155,003,908 effective search space: 463185105516 effective search space used: 463185105516 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)