Clone Name | rbart54g07 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-... | 29 | 4.5 | 2 | AROB_CAUCR (Q9A434) 3-dehydroquinate synthase (EC 4.2.3.4) | 29 | 4.5 |
---|
>NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Retinoid| X receptor-interacting protein 13) (RIP13) Length = 2453 Score = 29.3 bits (64), Expect = 4.5 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = +2 Query: 308 ASSSFVSADGATSICSTTKPASWHADFRSSPCASPSGQRATTAP 439 A SS S++ A S +T A A +PCASPS TT P Sbjct: 746 AKSSEDSSENAASRGNTEPVAELEATTDPAPCASPSSAVPTTKP 789
>AROB_CAUCR (Q9A434) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 370 Score = 29.3 bits (64), Expect = 4.5 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = -2 Query: 435 AVVALCPDGDAQGELLKSACQEAGFVVEQIEVAPSALTK--EELASLS 298 AVV G GE L +A Q AG V+ I +AP +K E LA LS Sbjct: 41 AVVTDAHVGAHHGERLSAALQGAGITVDLITIAPGEESKSFEGLADLS 88 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,268,065 Number of Sequences: 219361 Number of extensions: 815985 Number of successful extensions: 2034 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2009 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2034 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)