ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart54g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 1... 64 4e-07
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
3dbj|AK070818.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
5gb|CP000222.1| Drosophila melanogaster genomic scaffold 21100002... 44 0.38
6gb|AC119911.10| Mus musculus chromosome 1, clone RP24-242P4, com... 42 1.5
7gb|AC124546.4| Mus musculus BAC clone RP23-273G17 from chromosom... 42 1.5
8gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 1.5
9emb|CR853297.8| Zebrafish DNA sequence from clone DKEYP-118B3 in... 42 1.5
10gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 42 1.5
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
12dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
13dbj|AP003750.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
14emb|BX005141.5| Zebrafish DNA sequence from clone CH211-13K16, c... 42 1.5
15gb|AC107045.9| Mus musculus chromosome 1, clone RP23-334J7, comp... 42 1.5
16emb|AL928611.9| Mouse DNA sequence from clone RP23-263O5 on chro... 42 1.5
17emb|CT030196.9| Mouse DNA sequence from clone RP23-282B14 on chr... 42 1.5
18gb|AC161927.11| Mus musculus chromosome 1, clone RP23-22I18, com... 42 1.5
19gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
20gb|AC155235.2| Mus musculus BAC clone RP24-406H23 from chromosom... 40 6.0
21gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
22gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
23gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
24gb|BC073317.1| Xenopus laevis MGC80720 protein, mRNA (cDNA clone... 40 6.0
25gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete... 40 6.0
26gb|AC009909.6| Drosophila melanogaster clone BACR30P05, complete... 40 6.0
27ref|XM_365740.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.0
28gb|AY488059.1| Leishmania donovani S-adenosyl-L-methionine-C-24-... 40 6.0
29gb|AY488058.1| Leishmania donovani S-adenosyl-L-methionine-C-24-... 40 6.0
30gb|AC140443.2| Mus musculus BAC clone RP24-171A23 from chromosom... 40 6.0
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.0
32gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's H... 40 6.0
33gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete s... 40 6.0
34gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.0
35emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
36emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
37emb|AL713962.14| Mouse DNA sequence from clone RP23-3D5 on chrom... 40 6.0
38emb|BX546493.8| Zebrafish DNA sequence from clone RP71-34B19, co... 40 6.0
39gb|AC087878.7| Homo sapiens chromosome 15, clone RP11-62C7, comp... 40 6.0
40gb|AC092531.16| Rattus norvegicus clone rp32-475b19, complete se... 40 6.0
41gb|AC092530.35| Rattus norvegicus clone rp32-28p17, complete seq... 40 6.0
42gb|AC113146.2| Homo sapiens chromosome 15, clone RP11-265N7, com... 40 6.0
43gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 40 6.0
44dbj|AK147855.1| Mus musculus melanocyte cDNA, RIKEN full-length ... 40 6.0
45dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
46dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
47dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
49gb|AE003582.4| Drosophila melanogaster chromosome 2L, section 9 ... 40 6.0
50emb|BX001003.6| Zebrafish DNA sequence from clone CH211-215E7, c... 40 6.0
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
52emb|AL691474.29| Mouse DNA sequence from clone RP23-406D5 on chr... 40 6.0
53gb|AC128697.4| Mus musculus BAC clone RP24-388P9 from 12, comple... 40 6.0
54gb|AC124505.4| Mus musculus BAC clone RP23-421P23 from 7, comple... 40 6.0
55emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in... 40 6.0
56gb|AC002444.1|AC002444 Drosophila melanogaster (P1 DS02782 (D71)... 40 6.0 
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09,
             complete sequence
          Length = 135363

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                         
Query: 362   aagccggcctcctggcacgccgacttcaggagctccccctgcgcgtcaccgtctgggcag 421
             ||||| || ||| ||||||||  || |||||||  | ||||||| || ||||| ||||| 
Sbjct: 91387 aagccagcatcccggcacgccttctccaggagcagcacctgcgcttcgccgtccgggcac 91328

                                     
Query: 422   agggccaccaccgcgcccccgctg 445
             ||||||||||||||||||||||||
Sbjct: 91327 agggccaccaccgcgcccccgctg 91304
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                           
Query: 362     aagccggcctcctggcacgccgacttcaggagctccccctgcgcgtcaccgtctgggcag 421
               ||||| || ||| ||||||||  || |||||||  | ||||||| || ||||| ||||| 
Sbjct: 6035304 aagccagcatcccggcacgccttctccaggagcagcacctgcgcttcgccgtccgggcac 6035245

                                       
Query: 422     agggccaccaccgcgcccccgctg 445
               ||||||||||||||||||||||||
Sbjct: 6035244 agggccaccaccgcgcccccgctg 6035221



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 193     tacctccatcccaaattagt 212
               ||||||||||||||||||||
Sbjct: 8001413 tacctccatcccaaattagt 8001394
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>dbj|AK070818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068B12, full
            insert sequence
          Length = 1721

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                        
Query: 362  aagccggcctcctggcacgccgacttcaggagctccccctgcgcgtcaccgtctgggcag 421
            ||||| || ||| ||||||||  || |||||||  | ||||||| || ||||| ||||| 
Sbjct: 1118 aagccagcatcccggcacgccttctccaggagcagcacctgcgcttcgccgtccgggcac 1059

                                    
Query: 422  agggccaccaccgcgcccccgctg 445
            ||||||||||||||||||||||||
Sbjct: 1058 agggccaccaccgcgcccccgctg 1035
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                           
Query: 362     aagccggcctcctggcacgccgacttcaggagctccccctgcgcgtcaccgtctgggcag 421
               ||||| || ||| ||||||||  || |||||||  | ||||||| || ||||| ||||| 
Sbjct: 6101781 aagccagcatcccggcacgccttctccaggagcagcacctgcgcttcgccgtccgggcac 6101722

                                       
Query: 422     agggccaccaccgcgcccccgctg 445
               ||||||||||||||||||||||||
Sbjct: 6101721 agggccaccaccgcgcccccgctg 6101698



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 193     tacctccatcccaaattagt 212
               ||||||||||||||||||||
Sbjct: 8071500 tacctccatcccaaattagt 8071481
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>gb|CP000222.1| Drosophila melanogaster genomic scaffold 211000022280779
          Length = 313010

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 12     aggaaccttttatttttatgca 33
              ||||||||||||||||||||||
Sbjct: 301419 aggaaccttttatttttatgca 301398
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>gb|AC119911.10| Mus musculus chromosome 1, clone RP24-242P4, complete sequence
          Length = 175107

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 116    aaactcctgtgatcctgtgat 136
              |||||||||||||||||||||
Sbjct: 103545 aaactcctgtgatcctgtgat 103565
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>gb|AC124546.4| Mus musculus BAC clone RP23-273G17 from chromosome 12, complete
             sequence
          Length = 214438

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   aaactcctgtgatcctgtgat 136
             |||||||||||||||||||||
Sbjct: 40303 aaactcctgtgatcctgtgat 40283
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 349     ctgctccaccacgaagccggc 369
               |||||||||||||||||||||
Sbjct: 3147196 ctgctccaccacgaagccggc 3147216
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>emb|CR853297.8| Zebrafish DNA sequence from clone DKEYP-118B3 in linkage group 15,
             complete sequence
          Length = 182283

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    cttttatttttatgcatcaagatga 42
             |||||||||||| ||||||||||||
Sbjct: 71036 cttttatttttaagcatcaagatga 71060
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 366    cggcctcctggcacgccgact 386
              |||||||||||||||||||||
Sbjct: 841659 cggcctcctggcacgccgact 841639
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 188      tctattacctccatcccaaat 208
                |||||||||||||||||||||
Sbjct: 23963116 tctattacctccatcccaaat 23963136
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>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0005G07
          Length = 142850

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    tctattacctccatcccaaat 208
              |||||||||||||||||||||
Sbjct: 118043 tctattacctccatcccaaat 118063
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>dbj|AP003750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1174_G05
          Length = 111202

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 188  tctattacctccatcccaaat 208
            |||||||||||||||||||||
Sbjct: 4724 tctattacctccatcccaaat 4744
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>emb|BX005141.5| Zebrafish DNA sequence from clone CH211-13K16, complete sequence
          Length = 166576

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 18     cttttatttttatgcatcaagatga 42
              |||||||||||| ||||||||||||
Sbjct: 108523 cttttatttttaagcatcaagatga 108499
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>gb|AC107045.9| Mus musculus chromosome 1, clone RP23-334J7, complete sequence
          Length = 222700

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 116    aaactcctgtgatcctgtgat 136
              |||||||||||||||||||||
Sbjct: 207179 aaactcctgtgatcctgtgat 207199
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>emb|AL928611.9| Mouse DNA sequence from clone RP23-263O5 on chromosome 2, complete
             sequence
          Length = 199317

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    ttttatttttatgcatcaaga 39
             |||||||||||||||||||||
Sbjct: 89119 ttttatttttatgcatcaaga 89139
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>emb|CT030196.9| Mouse DNA sequence from clone RP23-282B14 on chromosome 12, complete
              sequence
          Length = 215752

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 116    aaactcctgtgatcctgtgat 136
              |||||||||||||||||||||
Sbjct: 142003 aaactcctgtgatcctgtgat 141983
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>gb|AC161927.11| Mus musculus chromosome 1, clone RP23-22I18, complete sequence
          Length = 223377

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 116   aaactcctgtgatcctgtgat 136
             |||||||||||||||||||||
Sbjct: 10400 aaactcctgtgatcctgtgat 10420
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>gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0085M22, complete sequence
          Length = 145104

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tgctatgctctcatctatta 194
             ||||||||||||||||||||
Sbjct: 56189 tgctatgctctcatctatta 56208
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>gb|AC155235.2| Mus musculus BAC clone RP24-406H23 from chromosome 12, complete sequence
          Length = 158341

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    atcccaaattagttgcttca 219
              ||||||||||||||||||||
Sbjct: 137731 atcccaaattagttgcttca 137712
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>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10,
              complete sequence
          Length = 171101

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    ctattacctccatcccaaat 208
              ||||||||||||||||||||
Sbjct: 156536 ctattacctccatcccaaat 156555
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>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map
             near S2137, complete sequence
          Length = 197516

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   tacctccatcccaaattagt 212
             ||||||||||||||||||||
Sbjct: 82289 tacctccatcccaaattagt 82270
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>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11,
             complete sequence
          Length = 112065

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   ctattacctccatcccaaat 208
             ||||||||||||||||||||
Sbjct: 19232 ctattacctccatcccaaat 19251
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>gb|BC073317.1| Xenopus laevis MGC80720 protein, mRNA (cDNA clone MGC:80720
            IMAGE:5511912), complete cds
          Length = 2276

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 170  gatcctgctatgctctcatc 189
            ||||||||||||||||||||
Sbjct: 1012 gatcctgctatgctctcatc 993
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>gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete sequence
          Length = 168540

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    aatacatgagatccttttgg 285
              ||||||||||||||||||||
Sbjct: 162480 aatacatgagatccttttgg 162499
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>gb|AC009909.6| Drosophila melanogaster clone BACR30P05, complete sequence
          Length = 171772

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   aatacatgagatccttttgg 285
             ||||||||||||||||||||
Sbjct: 19750 aatacatgagatccttttgg 19769
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>ref|XM_365740.1| Magnaporthe grisea 70-15 hypothetical protein (MG02442.4) partial
            mRNA
          Length = 3477

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 303  agcttgccagctcctccttt 322
            ||||||||||||||||||||
Sbjct: 1303 agcttgccagctcctccttt 1284
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>gb|AY488059.1| Leishmania donovani
           S-adenosyl-L-methionine-C-24-delta-sterol-
           methyltransferase B (SCMT1) mRNA, complete cds
          Length = 2171

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 352 ctccaccacgaagccggcct 371
           ||||||||||||||||||||
Sbjct: 765 ctccaccacgaagccggcct 746
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>gb|AY488058.1| Leishmania donovani
            S-adenosyl-L-methionine-C-24-delta-sterol-
            methyltransferase A (SCMT1) mRNA, complete cds
          Length = 3417

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  ctccaccacgaagccggcct 371
            ||||||||||||||||||||
Sbjct: 1352 ctccaccacgaagccggcct 1333
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>gb|AC140443.2| Mus musculus BAC clone RP24-171A23 from chromosome 13, complete sequence
          Length = 180633

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    gacttcaggagctccccctg 402
              ||||||||||||||||||||
Sbjct: 120504 gacttcaggagctccccctg 120485
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     tgctatgctctcatctatta 194
               ||||||||||||||||||||
Sbjct: 8432646 tgctatgctctcatctatta 8432665
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>gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 256354

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    catgagatccttttggctaa 289
              ||||||||||||||||||||
Sbjct: 253737 catgagatccttttggctaa 253718
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>gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete sequence
          Length = 113836

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   agattctaaaacaattaatt 243
             ||||||||||||||||||||
Sbjct: 83889 agattctaaaacaattaatt 83908
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 353     tccaccacgaagccggcctc 372
               ||||||||||||||||||||
Sbjct: 2730398 tccaccacgaagccggcctc 2730379
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>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
             complete sequence
          Length = 129037

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   aattagttgcttcagattag 225
             ||||||||||||||||||||
Sbjct: 87010 aattagttgcttcagattag 86991
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>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09,
             complete sequence
          Length = 152732

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   aattagttgcttcagattag 225
             ||||||||||||||||||||
Sbjct: 15033 aattagttgcttcagattag 15014
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>emb|AL713962.14| Mouse DNA sequence from clone RP23-3D5 on chromosome 11, complete
              sequence
          Length = 230198

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttttatttttatgcatcaag 38
              ||||||||||||||||||||
Sbjct: 142636 ttttatttttatgcatcaag 142655
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>emb|BX546493.8| Zebrafish DNA sequence from clone RP71-34B19, complete sequence
          Length = 173065

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    aaccttttatttttatgcatcaag 38
             ||||||||||||||||||| ||||
Sbjct: 65592 aaccttttatttttatgcaacaag 65615
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>gb|AC087878.7| Homo sapiens chromosome 15, clone RP11-62C7, complete sequence
          Length = 166485

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   atgaaacatcatgaaaaact 120
             ||||||||||||||||||||
Sbjct: 40781 atgaaacatcatgaaaaact 40762
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>gb|AC092531.16| Rattus norvegicus clone rp32-475b19, complete sequence
          Length = 160215

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    catgagatccttttggctaa 289
              ||||||||||||||||||||
Sbjct: 131809 catgagatccttttggctaa 131790
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>gb|AC092530.35| Rattus norvegicus clone rp32-28p17, complete sequence
          Length = 221618

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    catgagatccttttggctaa 289
              ||||||||||||||||||||
Sbjct: 141295 catgagatccttttggctaa 141314
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>gb|AC113146.2| Homo sapiens chromosome 15, clone RP11-265N7, complete sequence
          Length = 178395

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   atgaaacatcatgaaaaact 120
             ||||||||||||||||||||
Sbjct: 12379 atgaaacatcatgaaaaact 12398
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>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
              sequence
          Length = 144191

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    tacctccatcccaaattagt 212
              ||||||||||||||||||||
Sbjct: 117908 tacctccatcccaaattagt 117927
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>dbj|AK147855.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library,
            clone:G270069K09 product:AU RNA binding
            protein/enoyl-coenzyme A hydratase, full insert sequence
          Length = 3237

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gacttcaggagctccccctg 402
            ||||||||||||||||||||
Sbjct: 1247 gacttcaggagctccccctg 1266
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 206      aattagttgcttcagattag 225
                ||||||||||||||||||||
Sbjct: 30611302 aattagttgcttcagattag 30611283
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 193      tacctccatcccaaattagt 212
                ||||||||||||||||||||
Sbjct: 21492149 tacctccatcccaaattagt 21492130
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 189      ctattacctccatcccaaat 208
                ||||||||||||||||||||
Sbjct: 25915004 ctattacctccatcccaaat 25915023
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     tgctatgctctcatctatta 194
               ||||||||||||||||||||
Sbjct: 8430481 tgctatgctctcatctatta 8430500
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>gb|AE003582.4| Drosophila melanogaster chromosome 2L, section 9 of 83 of the complete
             sequence
          Length = 295132

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   aatacatgagatccttttgg 285
             ||||||||||||||||||||
Sbjct: 42608 aatacatgagatccttttgg 42627
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>emb|BX001003.6| Zebrafish DNA sequence from clone CH211-215E7, complete sequence
          Length = 212403

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     gaaccttttatttttatgca 33
              ||||||||||||||||||||
Sbjct: 149061 gaaccttttatttttatgca 149080
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 193      tacctccatcccaaattagt 212
                ||||||||||||||||||||
Sbjct: 21503812 tacctccatcccaaattagt 21503793
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>emb|AL691474.29| Mouse DNA sequence from clone RP23-406D5 on chromosome 4, complete
             sequence
          Length = 176652

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tgcatcaagatgatgacaca 49
             ||||||||||||||||||||
Sbjct: 28347 tgcatcaagatgatgacaca 28328
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>gb|AC128697.4| Mus musculus BAC clone RP24-388P9 from 12, complete sequence
          Length = 169780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   atcccaaattagttgcttca 219
             ||||||||||||||||||||
Sbjct: 47697 atcccaaattagttgcttca 47678
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>gb|AC124505.4| Mus musculus BAC clone RP23-421P23 from 7, complete sequence
          Length = 222439

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    aggaaccttttatttttatg 31
             ||||||||||||||||||||
Sbjct: 34292 aggaaccttttatttttatg 34273
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>emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in linkage group 18,
              complete sequence
          Length = 182116

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     gaaccttttatttttatgca 33
              ||||||||||||||||||||
Sbjct: 129206 gaaccttttatttttatgca 129187
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>gb|AC002444.1|AC002444 Drosophila melanogaster (P1 DS02782 (D71)) DNA sequence, complete
             sequence
          Length = 80124

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   aatacatgagatccttttgg 285
             ||||||||||||||||||||
Sbjct: 73133 aatacatgagatccttttgg 73114


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,908,812
Number of Sequences: 3902068
Number of extensions: 4908812
Number of successful extensions: 93198
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92753
Number of HSP's gapped (non-prelim): 445
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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