ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart54f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4... 72 2e-09
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
3dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
4dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
5dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
6gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8... 56 1e-04
7dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
8gb|AY108381.1| Zea mays PCO088244 mRNA sequence 56 1e-04
9gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone ... 56 1e-04
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
12dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
13dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
14ref|XM_648008.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 46 0.11
15dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
16dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
17dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
18dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
19ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 42 1.6
20ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 42 1.6
21gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds 42 1.6
22emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate ... 42 1.6
23gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, com... 42 1.6
24gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28... 42 1.6
25gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete s... 42 1.6
26gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate re... 42 1.6
27dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a prot... 42 1.6
28emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chro... 42 1.6
29gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7... 40 6.5
30gb|AC165353.4| Mus musculus BAC clone RP23-167C2 from chromosome... 40 6.5
31gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 6.5
32ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant... 40 6.5
33gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosom... 40 6.5
34emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chr... 40 6.5
35emb|AL121770.1|SPAC821 S.pombe chromosome I cosmid c821 40 6.5
36dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 6.5
37gb|AE005923.1| Caulobacter crescentus CB15 section 249 of 359 of... 40 6.5
38emb|BX934911.1| Gallus gallus finished cDNA, clone ChEST150h3 40 6.5
39gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana... 40 6.5
40emb|AL845323.18| Mouse DNA sequence from clone RP23-304D11 on ch... 40 6.5
41dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
42dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
43gb|AF099188.1|AF099188 Caulobacter crescentus cell division prot... 40 6.5
44gb|AY106967.1| Zea mays PCO088243 mRNA sequence 40 6.5
45emb|AL772401.22| Mouse DNA sequence from clone RP23-49A12 on chr... 40 6.5
46gb|AF009512.1|AF009512 Schizosaccharomyces pombe protein kinase ... 40 6.5
47gb|AC161251.3| Mus musculus BAC clone RP24-174C13 from chromosom... 40 6.5
48emb|AL732617.24| Mouse DNA sequence from clone RP23-196C23 on ch... 40 6.5
49gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complet... 40 6.5
50emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chro... 40 6.5 
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds
          Length = 1833

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 433  cgggtcggagtcgtggcagtccatgtagtccatgaagggcgagaggcg 480
            ||||||||||||||||||||||||||||||  ||||||| ||||||||
Sbjct: 1392 cgggtcggagtcgtggcagtccatgtagtcagtgaagggggagaggcg 1345
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                              
Query: 433      cgggtcggagtcgtggcagtccatgtagtc 462
                ||||||||||||||||||||||||||||||
Sbjct: 15167683 cgggtcggagtcgtggcagtccatgtagtc 15167712



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                            
Query: 176      ggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgtaccccgag 235
                |||||||||||||| |||||||| ||||||||  | |  || ||||||||||| ||   |
Sbjct: 15167411 ggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgtagccgtcg 15167470

                                                      
Query: 236      gagaccgccttgtccccctcttcccgatcatacccacc 273
                | |||||||||||| || || ||||| || ||||||||
Sbjct: 15167471 gcgaccgccttgtcgccttcgtcccggtcgtacccacc 15167508
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>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0043B10
          Length = 167399

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                            
Query: 433    cgggtcggagtcgtggcagtccatgtagtc 462
              ||||||||||||||||||||||||||||||
Sbjct: 139649 cgggtcggagtcgtggcagtccatgtagtc 139678



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                          
Query: 176    ggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgtaccccgag 235
              |||||||||||||| |||||||| ||||||||  | |  || ||||||||||| ||   |
Sbjct: 139377 ggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgtagccgtcg 139436

                                                    
Query: 236    gagaccgccttgtccccctcttcccgatcatacccacc 273
              | |||||||||||| || || ||||| || ||||||||
Sbjct: 139437 gcgaccgccttgtcgccttcgtcccggtcgtacccacc 139474
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>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0493G01
          Length = 167587

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                           
Query: 433   cgggtcggagtcgtggcagtccatgtagtc 462
             ||||||||||||||||||||||||||||||
Sbjct: 21056 cgggtcggagtcgtggcagtccatgtagtc 21085



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                         
Query: 176   ggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgtaccccgag 235
             |||||||||||||| |||||||| ||||||||  | |  || ||||||||||| ||   |
Sbjct: 20784 ggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgtagccgtcg 20843

                                                   
Query: 236   gagaccgccttgtccccctcttcccgatcatacccacc 273
             | |||||||||||| || || ||||| || ||||||||
Sbjct: 20844 gcgaccgccttgtcgccttcgtcccggtcgtacccacc 20881
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>dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N02, full
            insert sequence
          Length = 2710

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                          
Query: 433  cgggtcggagtcgtggcagtccatgtagtc 462
            ||||||||||||||||||||||||||||||
Sbjct: 2174 cgggtcggagtcgtggcagtccatgtagtc 2145



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 176  ggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgtaccccgag 235
            |||||||||||||| |||||||| ||||||||  | |  || ||||||||||| ||   |
Sbjct: 2446 ggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgtagccgtcg 2387

                                                  
Query: 236  gagaccgccttgtccccctcttcccgatcatacccacc 273
            | |||||||||||| || || ||||| || ||||||||
Sbjct: 2386 gcgaccgccttgtcgccttcgtcccggtcgtacccacc 2349
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>gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8) mRNA, complete cds
          Length = 1529

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 83   aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 130
            ||||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 1269 aacgggtagtccgtgtaaccaacgacgggatccggggtgtagaacgtc 1222
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>dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H07, full
            insert sequence
          Length = 1360

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 83   aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 130
            ||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 1150 aacgggtagtcggtgtagccggcgacggggtcggcggtgtagaacgtc 1103



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 410 gccatgtggaggccgagcgcgtgcgggtcggagtcg 445
           |||||||||  | ||||||||| |||||||||||||
Sbjct: 802 gccatgtgggcggcgagcgcgtccgggtcggagtcg 767
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>gb|AY108381.1| Zea mays PCO088244 mRNA sequence
          Length = 694

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 83  aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 130
           ||||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 434 aacgggtagtccgtgtaaccaacgacgggatccggggtgtagaacgtc 387
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>gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBa0043H01, from
             chromosome 4, complete sequence
          Length = 15426

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 83    aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 130
             ||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 12779 aacgggtagtcggtgtagccggcgacggggtcggcggtgtagaacgtc 12826



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 410   gccatgtggaggccgagcgcgtgcgggtcggagtcg 445
             |||||||||  | ||||||||| |||||||||||||
Sbjct: 13127 gccatgtgggcggcgagcgcgtccgggtcggagtcg 13162
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                         
Query: 433     cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
               |||||||||||||  ||||||||||||||||| ||| |||||
Sbjct: 5890004 cgggtcggagtcgacgcagtccatgtagtccaggaacggcga 5890045



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                           
Query: 160     gagctctagcctctttggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 219
               |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 5889728 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 5889787

                                                                  
Query: 220     gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 270
               |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 5889788 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 5889838



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                         
Query: 433     cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
               |||||||||||||  |||||||||| |||||| ||| |||||
Sbjct: 5895993 cgggtcggagtcgacgcagtccatgaagtccaggaacggcga 5896034



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                        
Query: 169     cctctttggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggc 225
               |||| |||||| ||| ||||| |||| |||||||| |||| | | ||||||||||||
Sbjct: 5910509 cctccttggcaagtcggggttggccaagaagagcctcccataggcgacgaggtcggc 5910565



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 433     cgggtcggagtcgtggcagtccatgtagtccatgaa 468
               |||||||||||||  ||||||||| ||||| |||||
Sbjct: 5906210 cgggtcggagtcgacgcagtccatatagtcgatgaa 5906245
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>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0024N18
          Length = 128739

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 433   cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
             |||||||||||||  ||||||||||||||||| ||| |||||
Sbjct: 11656 cgggtcggagtcgacgcagtccatgtagtccaggaacggcga 11697



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 160   gagctctagcctctttggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 219
             |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 11380 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 11439

                                                                
Query: 220   gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 270
             |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 11440 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 11490



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 433   cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
             |||||||||||||  |||||||||| |||||| ||| |||||
Sbjct: 17645 cgggtcggagtcgacgcagtccatgaagtccaggaacggcga 17686



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 169   cctctttggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggc 225
             |||| |||||| ||| ||||| |||| |||||||| |||| | | ||||||||||||
Sbjct: 32161 cctccttggcaagtcggggttggccaagaagagcctcccataggcgacgaggtcggc 32217



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 433   cgggtcggagtcgtggcagtccatgtagtccatgaa 468
             |||||||||||||  ||||||||| ||||| |||||
Sbjct: 27862 cgggtcggagtcgacgcagtccatatagtcgatgaa 27897
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 433   cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
             |||||||||||||  ||||||||||||||||| ||| |||||
Sbjct: 90779 cgggtcggagtcgacgcagtccatgtagtccaggaacggcga 90820



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 160   gagctctagcctctttggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 219
             |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 90503 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 90562

                                                                
Query: 220   gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 270
             |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 90563 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 90613



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 433   cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
             |||||||||||||  |||||||||| |||||| ||| |||||
Sbjct: 96768 cgggtcggagtcgacgcagtccatgaagtccaggaacggcga 96809



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                       
Query: 169    cctctttggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggc 225
              |||| |||||| ||| ||||| |||| |||||||| |||| | | ||||||||||||
Sbjct: 111284 cctccttggcaagtcggggttggccaagaagagcctcccataggcgacgaggtcggc 111340



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 433    cgggtcggagtcgtggcagtccatgtagtccatgaa 468
              |||||||||||||  ||||||||| ||||| |||||
Sbjct: 106985 cgggtcggagtcgacgcagtccatatagtcgatgaa 107020
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>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full
           insert sequence
          Length = 1517

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 433 cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
           |||||||||||||  ||||||||||||||||| ||| |||||
Sbjct: 904 cgggtcggagtcgacgcagtccatgtagtccaggaacggcga 863



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 89/111 (80%)
 Strand = Plus / Minus

                                                                        
Query: 160  gagctctagcctctttggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 219
            |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 1180 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 1121

                                                               
Query: 220  gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 270
            |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 1120 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 1070
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>ref|XM_648008.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (94.t00028)
            partial mRNA
          Length = 1644

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 33   caatatatggatcaatcattatttatg 59
            ||||||||| |||||||||||||||||
Sbjct: 1264 caatatatgaatcaatcattatttatg 1290
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>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full
           insert sequence
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 433 cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
           |||||||||||||  |||||||||| |||||| ||| |||||
Sbjct: 826 cgggtcggagtcgacgcagtccatgaagtccaggaacggcga 785
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>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full
           insert sequence
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 433 cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
           |||||||||||||  |||||||||| |||||| ||| |||||
Sbjct: 826 cgggtcggagtcgacgcagtccatgaagtccaggaacggcga 785
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>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full
           insert sequence
          Length = 1422

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 433 cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
           |||||||||||||  |||||||||| |||||| ||| |||||
Sbjct: 821 cgggtcggagtcgacgcagtccatgaagtccaggaacggcga 780
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>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full
           insert sequence
          Length = 1434

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 433 cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 474
           |||||||||||||  |||||||||| |||||| ||| |||||
Sbjct: 826 cgggtcggagtcgacgcagtccatgaagtccaggaacggcga 785
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>ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.2 mRNA, complete cds
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 86   gggtagtcggtgtaaccgacgacgggatc 114
            ||||| ||||||||||||||||| |||||
Sbjct: 1242 gggtaatcggtgtaaccgacgactggatc 1214
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>ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.1 mRNA, complete cds
          Length = 1451

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 86   gggtagtcggtgtaaccgacgacgggatc 114
            ||||| ||||||||||||||||| |||||
Sbjct: 1233 gggtaatcggtgtaaccgacgactggatc 1205
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>gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 86   gggtagtcggtgtaaccgacgacgggatc 114
            ||||| ||||||||||||||||| |||||
Sbjct: 1097 gggtaatcggtgtaaccgacgactggatc 1069
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>emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate reductase
          Length = 1311

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 86   gggtagtcggtgtaaccgacgacgggatc 114
            ||||| ||||||||||||||||| |||||
Sbjct: 1162 gggtaatcggtgtaaccgacgactggatc 1134
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>gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, complete cds
          Length = 1252

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 86   gggtagtcggtgtaaccgacgacgggatc 114
            ||||| ||||||||||||||||| |||||
Sbjct: 1167 gggtaatcggtgtaaccgacgactggatc 1139
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>gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28O16 genomic sequence, complete
             sequence
          Length = 87684

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 86    gggtagtcggtgtaaccgacgacgggatc 114
             ||||| ||||||||||||||||| |||||
Sbjct: 15021 gggtaatcggtgtaaccgacgactggatc 14993
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>gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete sequence
          Length = 1280

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 86   gggtagtcggtgtaaccgacgacgggatc 114
            ||||| ||||||||||||||||| |||||
Sbjct: 1167 gggtaatcggtgtaaccgacgactggatc 1139
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>gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate reductase OPR1 and
            12-oxophytodienoate reductase OPR2 genes, complete cds
          Length = 7079

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 86   gggtagtcggtgtaaccgacgacgggatc 114
            ||||| ||||||||||||||||| |||||
Sbjct: 4615 gggtaatcggtgtaaccgacgactggatc 4587
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>dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a protein, complete cds
          Length = 1454

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 79   aagaaacgggtagtcggtgtaaccgacgacggg 111
            |||||| |||||||||||||| ||||| |||||
Sbjct: 1139 aagaaatgggtagtcggtgtagccgacaacggg 1107
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>emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chromosome 15, complete
             sequence
          Length = 149807

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 178   caggtcagggtttgccaggaa 198
             |||||||||||||||||||||
Sbjct: 70558 caggtcagggtttgccaggaa 70578
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>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds
          Length = 1594

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 88   gtagtcggtgtaaccgacgacggg 111
            |||||| |||||||||||||||||
Sbjct: 1400 gtagtccgtgtaaccgacgacggg 1377
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>gb|AC165353.4| Mus musculus BAC clone RP23-167C2 from chromosome 3, complete sequence
          Length = 198393

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     aagaaaaggttccatttgat 22
             ||||||||||||||||||||
Sbjct: 24462 aagaaaaggttccatttgat 24443
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    gggcagcagcctgtgcggca 329
              ||||||||||||||||||||
Sbjct: 983671 gggcagcagcctgtgcggca 983690
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>ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant protein
           (Afu4g13830) partial mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 277 tgcaatgaaggtgcccttgaaggc 300
           |||||||||||||||| |||||||
Sbjct: 264 tgcaatgaaggtgcccatgaaggc 241
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>gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosome 7, complete sequence
          Length = 199810

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    tggttcaatgacacatcaag 77
             ||||||||||||||||||||
Sbjct: 70383 tggttcaatgacacatcaag 70364
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>emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chromosome 9, complete
             sequence
          Length = 44495

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ttttcacatggcaatatatg 41
             ||||||||||||||||||||
Sbjct: 17566 ttttcacatggcaatatatg 17547
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>emb|AL121770.1|SPAC821 S.pombe chromosome I cosmid c821
          Length = 35452

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   catcctgttgtacttattaa 149
             ||||||||||||||||||||
Sbjct: 33192 catcctgttgtacttattaa 33173
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     ccgccttgtccccctcttcc 259
               ||||||||||||||||||||
Sbjct: 4004811 ccgccttgtccccctcttcc 4004830
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>gb|AE005923.1| Caulobacter crescentus CB15 section 249 of 359 of the complete genome
          Length = 6158

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 393  ggtcattgagcttcgtggccatgtggaggccg 424
            |||||||||||||| ||||| ||| |||||||
Sbjct: 4657 ggtcattgagcttcatggccttgtagaggccg 4688
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>emb|BX934911.1| Gallus gallus finished cDNA, clone ChEST150h3
          Length = 1240

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 gcggcaccacccgccggccg 343
           ||||||||||||||||||||
Sbjct: 72  gcggcaccacccgccggccg 53
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>gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana BAC F17F8 from chromosome I,
             complete sequence
          Length = 102393

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    tatatggatcaatcattatttatg 59
             ||||||||| ||||||||||||||
Sbjct: 27805 tatatggatgaatcattatttatg 27828
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>emb|AL845323.18| Mouse DNA sequence from clone RP23-304D11 on chromosome 2, complete
             sequence
          Length = 228137

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   ctgtagggcagcagcctgtg 324
             ||||||||||||||||||||
Sbjct: 68961 ctgtagggcagcagcctgtg 68980
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>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full
           insert sequence
          Length = 1311

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 433 cgggtcggagtcgtggcagtccatgtagtccatgaa 468
           |||||||||||||  ||||||||| ||||| |||||
Sbjct: 829 cgggtcggagtcgacgcagtccatatagtcgatgaa 794
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>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full
           insert sequence
          Length = 1295

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 433 cgggtcggagtcgtggcagtccatgtagtccatgaa 468
           |||||||||||||  ||||||||| ||||| |||||
Sbjct: 812 cgggtcggagtcgacgcagtccatatagtcgatgaa 777
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>gb|AF099188.1|AF099188 Caulobacter crescentus cell division protein DivB (divB) gene,
            complete cds; and MurG (murG) gene, partial cds
          Length = 2475

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 393  ggtcattgagcttcgtggccatgtggaggccg 424
            |||||||||||||| ||||| ||| |||||||
Sbjct: 1301 ggtcattgagcttcatggccttgtagaggccg 1270
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>gb|AY106967.1| Zea mays PCO088243 mRNA sequence
          Length = 765

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 88  gtagtcggtgtaaccgacgacggg 111
           |||||| |||||||||||||||||
Sbjct: 571 gtagtccgtgtaaccgacgacggg 548
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>emb|AL772401.22| Mouse DNA sequence from clone RP23-49A12 on chromosome 4, complete
             sequence
          Length = 179155

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   cctctttggcaggtcagggt 188
             ||||||||||||||||||||
Sbjct: 91539 cctctttggcaggtcagggt 91558
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>gb|AF009512.1|AF009512 Schizosaccharomyces pombe protein kinase Orb6p (orb6) gene, complete
            cds
          Length = 2344

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 130  catcctgttgtacttattaa 149
            ||||||||||||||||||||
Sbjct: 2289 catcctgttgtacttattaa 2270
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>gb|AC161251.3| Mus musculus BAC clone RP24-174C13 from chromosome 3, complete sequence
          Length = 151247

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aagaaaaggttccatttgat 22
             ||||||||||||||||||||
Sbjct: 37228 aagaaaaggttccatttgat 37247
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>emb|AL732617.24| Mouse DNA sequence from clone RP23-196C23 on chromosome 4, complete
              sequence
          Length = 226501

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    cctctttggcaggtcagggt 188
              ||||||||||||||||||||
Sbjct: 109214 cctctttggcaggtcagggt 109195
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>gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complete sequence
          Length = 190414

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     tggttcaatgacacatcaag 77
              ||||||||||||||||||||
Sbjct: 156206 tggttcaatgacacatcaag 156187
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>emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chromosome 4, complete
              sequence
          Length = 186686

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    atgaaggtgcccttgaaggc 300
              ||||||||||||||||||||
Sbjct: 183740 atgaaggtgcccttgaaggc 183721


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,551,447
Number of Sequences: 3902068
Number of extensions: 3551447
Number of successful extensions: 63615
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63393
Number of HSP's gapped (non-prelim): 210
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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