ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart54f03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (HvOxOa) Length = 970 Score = 870 bits (439), Expect = 0.0 Identities = 445/447 (99%) Strand = Plus / Minus Query: 56 aataataagaagcaatacattttaactcctcgcattggttctgaaggctgaaccgctagg 115 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 970 aataataagaagcaatacattttaagtcctcgcattggttctgaaggctgaaccgctagg 911 Query: 116 ataacttattcaatcttattactatgaaatgtgagcttatccagaagcttgaatatagtc 175 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 910 ataacttattcaatcttattactatgaaatgcgagcttatccagaagcttgaatatagtc 851 Query: 176 tcctgtcgagtactattaaattcgcagcatacatggatatatagaattacatattcatat 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 850 tcctgtcgagtactattaaattcgcagcatacatggatatatagaattacatattcatat 791 Query: 236 tgatcatttggggctcatggaagttaagacccaccggcgaacttggacttgagaagttcc 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 tgatcatttggggctcatggaagttaagacccaccggcgaacttggacttgagaagttcc 731 Query: 296 acgaccccggcctccacccgaagagccttggtgagcaccggtgtggggatgggcgggttg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 acgaccccggcctccacccgaagagccttggtgagcaccggtgtggggatgggcgggttg 671 Query: 356 gaaccgaagagtgtgagcggcacgaagacgatgccagggttctggctgttgaaggacaca 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 gaaccgaagagtgtgagcggcacgaagacgatgccagggttctggctgttgaaggacaca 611 Query: 416 accatgtaggcttccgtcttaccaacgttgaactggaagtgcatgaggccgcgcgggatg 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 accatgtaggcttccgtcttaccaacgttgaactggaagtgcatgaggccgcgcgggatg 551 Query: 476 acgaaagtctctccggcacgcaccacc 502 ||||||||||||||||||||||||||| Sbjct: 550 acgaaagtctctccggcacgcaccacc 524
>gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds Length = 603 Score = 422 bits (213), Expect = e-115 Identities = 234/241 (97%) Strand = Plus / Minus Query: 262 agacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagc 321 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 603 agacccaccggcgaacttggacttgagaagttccacgactccggcctccacccggagagc 544 Query: 322 cttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaa 381 |||||||||||| || ||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 543 cttggtgagcacgggcgtggggatgggagggtcggagccgaagagtgtgagcggcacgaa 484 Query: 382 gacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 gacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaac 424 Query: 442 gttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccac 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 gttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccac 364 Query: 502 c 502 | Sbjct: 363 c 363
>emb|Y09918.1|TAPSBGER4 T.aestivum mRNA for germin-like protein 4, partial Length = 572 Score = 317 bits (160), Expect = 2e-83 Identities = 223/244 (91%) Strand = Plus / Minus Query: 259 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 318 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 321 ttaagacccaccagcgaacttggacttgagaagttcgacgaccccggcctccacccttag 262 Query: 319 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 378 ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| Sbjct: 261 tgccttggtgagcaccggcgtggggattggcgggttggaaccgaagagcatgagcggcac 202 Query: 379 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 438 ||| |||||||| |||||||| ||||||||||| |||||||||||||| || |||||||| Sbjct: 201 gaaaacgatgccggggttctgtctgttgaaggaaacaaccatgtaggcctctgtcttacc 142 Query: 439 aacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcac 498 |||||||||||||||||||||||| ||||| ||||||| ||| |||||||| |||| ||| Sbjct: 141 aacgttgaactggaagtgcatgagcccgcgtgggatgaggaacgtctctccagcacacac 82 Query: 499 cacc 502 |||| Sbjct: 81 cacc 78 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 82 tcctcgcattggttctgaaggctgaaccgctaggataacttattcaatcttattactatg 141 |||||| ||||| |||||||||| |||||| ||| ||||||||||||||||||||| | Sbjct: 497 tcctcgtattggctctgaaggctaaaccgcgaggctaacttattcaatcttattacaact 438 Query: 142 aaatgtgagcttatccagaagcttgaata 170 ||| ||||||| | ||||||||||||| Sbjct: 437 gcatgcgagcttagctagaagcttgaata 409
>gb|M63224.1|WHTGERMINA Wheat germin 9f-3.8 gene, complete cds Length = 3761 Score = 301 bits (152), Expect = 1e-78 Identities = 221/244 (90%) Strand = Plus / Minus Query: 259 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 318 |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || Sbjct: 1992 ttaagacccaccagcgaacttggatttgagaagttccacgaccccagcctccacccggag 1933 Query: 319 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 378 ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 1932 agccttggtgagcaccggtttggggatgggcgggttggagccgaagagcgtgagtggcac 1873 Query: 379 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 438 |||||||| || ||| |||||||||||||| | || |||||| |||| ||||||||||| Sbjct: 1872 gaagacgacgctggggctctggctgttgaagaagacgaccatggaggcctccgtcttacc 1813 Query: 439 aacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcac 498 ||||||||||||||||||||||| ||||||||||||| ||| |||||||| || ||||| Sbjct: 1812 gacgttgaactggaagtgcatgagcccgcgcgggatgaggaacgtctctccagcgcgcac 1753 Query: 499 cacc 502 |||| Sbjct: 1752 cacc 1749 Score = 99.6 bits (50), Expect = 9e-18 Identities = 132/156 (84%), Gaps = 5/156 (3%) Strand = Plus / Minus Query: 15 ataattatatattccgcttcaatcaaaagaacaaatatgacaataataagaagcaataca 74 |||||||||||||||| |||||| |||| |||||| ||||| ||||| ||||| |||| Sbjct: 2229 ataattatatattccg-ttcaatgaaaataacaaa---gacaaaaataaaaagcagtaca 2174 Query: 75 ttttaactcctcgcattggttctgaaggctgaaccgctaggataacttattcaatcttat 134 ||| || || ||| |||||||| ||||||||||| || ||| |||||||||||||||||| Sbjct: 2173 tttcaattcatcgtattggttccgaaggctgaactgcgaggttaacttattcaatcttat 2114 Query: 135 tactatgaaatgtgagcttatccagaagcttgaata 170 ||| | ||| ||||||| ||||||||||||||| Sbjct: 2113 tacaactgcatg-gagcttaaccagaagcttgaata 2079
>gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor, mRNA, complete cds Length = 1012 Score = 293 bits (148), Expect = 3e-76 Identities = 220/244 (90%) Strand = Plus / Minus Query: 259 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 318 |||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||| || Sbjct: 760 ttaaaacccagcggcaaacttggacttgagaagttccacgaccctggcctccacccggag 701 Query: 319 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 378 ||||||||||||||||| || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 700 tgccttggtgagcaccggcgttgggatgggcgggttggagccgaagagcgtgaggggcac 641 Query: 379 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 438 |||||| ||||| |||||||||||||||||||| || |||||| |||| || |||||||| Sbjct: 640 gaagacaatgccggggttctggctgttgaaggagacgaccatggaggcctcggtcttacc 581 Query: 439 aacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcac 498 |||||||||||||||||||||||||| || ||||||| ||| ||||||||||| ||||| Sbjct: 580 gacgttgaactggaagtgcatgaggccccgtgggatgaggaacgtctctccggcgcgcac 521 Query: 499 cacc 502 |||| Sbjct: 520 cacc 517
>gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds Length = 2822 Score = 293 bits (148), Expect = 3e-76 Identities = 220/244 (90%) Strand = Plus / Minus Query: 259 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 318 |||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||| || Sbjct: 2473 ttaaaacccagcggcaaacttggacttgagaagttccacgaccctggcctccacccggag 2414 Query: 319 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 378 ||||||||||||||||| || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 2413 tgccttggtgagcaccggcgttgggatgggcgggttggagccgaagagcgtgaggggcac 2354 Query: 379 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 438 |||||| ||||| |||||||||||||||||||| || |||||| |||| || |||||||| Sbjct: 2353 gaagacaatgccggggttctggctgttgaaggagacgaccatggaggcctcggtcttacc 2294 Query: 439 aacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcac 498 |||||||||||||||||||||||||| || ||||||| ||| ||||||||||| ||||| Sbjct: 2293 gacgttgaactggaagtgcatgaggccccgtgggatgaggaacgtctctccggcgcgcac 2234 Query: 499 cacc 502 |||| Sbjct: 2233 cacc 2230
>gb|U01963.1|HVU01963 Hordeum vulgare CM 72 germin subunit mRNA, complete cds Length = 1006 Score = 293 bits (148), Expect = 3e-76 Identities = 220/244 (90%) Strand = Plus / Minus Query: 259 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 318 |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 767 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 708 Query: 319 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 378 ||||||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| Sbjct: 707 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcac 648 Query: 379 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 438 ||||||||||||||||| |||||||||||||| || |||||| |||| ||||||||||| Sbjct: 647 aaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttacc 588 Query: 439 aacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcac 498 |||||||||||||||||||||||||| || ||||||| ||| |||||||| || ||||| Sbjct: 587 gacgttgaactggaagtgcatgaggccacgggggatgaggaaggtctctccagcgcgcac 528 Query: 499 cacc 502 |||| Sbjct: 527 cacc 524
>emb|Y09916.1|TAPSBGER2 T.aestivum mRNA for germin-like protein 2, partial Length = 764 Score = 285 bits (144), Expect = 7e-74 Identities = 219/244 (89%) Strand = Plus / Minus Query: 259 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 318 |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 506 ttaaaacccagcggcgaacttggacttgagtagttccacgaccccggcctccacccggag 447 Query: 319 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 378 ||||||||||||||||| || |||||||| || ||||| |||||||| |||| ||||| Sbjct: 446 cgccttggtgagcaccggcgttgggatgggtggattggagccgaagagcatgagtggcac 387 Query: 379 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 438 |||||||||||| |||||||||||||||||||| || |||||| |||| || |||||||| Sbjct: 386 gaagacgatgccggggttctggctgttgaaggagacgaccatggaggcctcggtcttacc 327 Query: 439 aacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcac 498 |||||||||||||||||||||||||||||| ||||||| ||| ||||| || || ||||| Sbjct: 326 aacgttgaactggaagtgcatgaggccgcgtgggatgaggaacgtctccccagcgcgcac 267 Query: 499 cacc 502 |||| Sbjct: 266 cacc 263 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 taacttattcaatcttattac 137 ||||||||||||||||||||| Sbjct: 633 taacttattcaatcttattac 613 Score = 40.1 bits (20), Expect = 6.8 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 16 taattatatattccgcttcaatcaaaagaacaaatatgacaataataagaag 67 ||||||||||||| | || ||| ||||||||||| | |||||||| |||||| Sbjct: 729 taattatatattcagttt-aatgaaaagaacaaagacgacaataaaaagaag 679
>emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1 Length = 856 Score = 272 bits (137), Expect = 1e-69 Identities = 219/245 (89%), Gaps = 1/245 (0%) Strand = Plus / Minus Query: 259 ttaagacccaccggcgaacttggacttgagaagttccacgacccc-ggcctccacccgaa 317 |||| ||||||| |||||||||||||||| |||||| |||||||| |||||| | || | Sbjct: 762 ttaaaacccaccagcgaacttggacttgaaaagttcgacgacccctggcctctatcctta 703 Query: 318 gagccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggca 377 | ||||||||||||||||| ||||| ||| ||||||||||||||| | |||||||||| Sbjct: 702 gcgccttggtgagcaccggcgtgggattggccgggttggaaccgaaaaaagtgagcggca 643 Query: 378 cgaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttac 437 |||| || ||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 642 cgaaaacaatgccggggttctggctgttgaaggaaacaaccatgtaggcttccgtcttac 583 Query: 438 caacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgca 497 ||||| ||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||| Sbjct: 582 caacgatgaactggaagtgcatgagcccgcgcgggatgaggaacgtctctccagcacgca 523 Query: 498 ccacc 502 ||||| Sbjct: 522 ccacc 518
>emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3 Length = 1027 Score = 268 bits (135), Expect = 2e-68 Identities = 220/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Minus Query: 259 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 318 |||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||| || Sbjct: 734 ttaagacccaccagcgaagttggatttgagaagttccacgaccccagcctccacccggag 675 Query: 319 agccttggtgagcaccggtgtggggatgggcgggttggaacc---gaagagtgtgagcgg 375 ||||||||||||||||||||||||||||||||||||||| || |||||| |||| | Sbjct: 674 agccttggtgagcaccggtgtggggatgggcgggttggatccgaagaagagcgtga---g 618 Query: 376 cacgaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtctt 435 |||||||||||| || |||||||||||||||||||| || |||||| |||| | ||||| Sbjct: 617 cacgaagacgattccggggttctggctgttgaaggagacgaccatggaggcatgtgtctt 558 Query: 436 accaacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacg 495 ||| ||||||||||||||||||||||| ||||| ||||||| ||| |||||||| ||||| Sbjct: 557 accgacgttgaactggaagtgcatgagcccgcgtgggatgaggaacgtctctccagcacg 498 Query: 496 caccacc 502 ||||||| Sbjct: 497 caccacc 491
>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene) Length = 828 Score = 256 bits (129), Expect = 6e-65 Identities = 207/233 (88%) Strand = Plus / Minus Query: 270 cggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagccttggtga 329 |||| ||||||||||||||||||||||||||||| || ||||| || || |||||||||| Sbjct: 661 cggcaaacttggacttgagaagttccacgaccccagcatccacacggagcgccttggtga 602 Query: 330 gcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgatgc 389 ||||||| || ||||| || |||||||||||||||| |||||| ||||| |||||||||| Sbjct: 601 gcaccggcgtcgggatcggtgggttggaaccgaagactgtgagtggcacaaagacgatgc 542 Query: 390 cagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaact 449 | |||||||||||||||||||||||||||||| | || |||||||| ||||||||||||| Sbjct: 541 ctgggttctggctgttgaaggacacaaccatggatgcctccgtcttgccaacgttgaact 482 Query: 450 ggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 | ||||||||||| || |||||||||| ||| ||||| || ||||||| |||| Sbjct: 481 gaaagtgcatgagcccacgcgggatgaggaatgtctcaccagcacgcaacacc 429
>emb|AJ504848.1|LPE504848 Lolium perenne mRNA for oxalate oxidase (oxo3 gene) Length = 868 Score = 252 bits (127), Expect = 1e-63 Identities = 199/223 (89%) Strand = Plus / Minus Query: 275 aacttggacttgagaagttccacgaccccggcctccacccgaagagccttggtgagcacc 334 ||||||||||||||||||||||||||||| || ||||| || || |||||||||||||| Sbjct: 656 aacttggacttgagaagttccacgaccccagcgtccacacggagtgccttggtgagcacg 597 Query: 335 ggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgatgccaggg 394 || || ||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 596 ggcgtagggatcggcggattggaaccgaagaccgtgagaggcacgaagacgatgcctggg 537 Query: 395 ttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaactggaag 454 |||||||| |||||||||||||||||| | || |||||||| |||||||||||||||||| Sbjct: 536 ttctggctattgaaggacacaaccatggatgcctccgtcttgccaacgttgaactggaag 477 Query: 455 tgcatgaggccgcgcgggatgacgaaagtctctccggcacgca 497 |||||||| ||||||||||||| ||| ||||| || ||||||| Sbjct: 476 tgcatgagcccgcgcgggatgaggaacgtctcaccagcacgca 434
>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene) Length = 867 Score = 244 bits (123), Expect = 2e-61 Identities = 201/227 (88%) Strand = Plus / Minus Query: 270 cggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagccttggtga 329 |||| ||||||||||||||||||||||||||||| || ||| | || || |||||||||| Sbjct: 661 cggcaaacttggacttgagaagttccacgaccccagcatccgcacggagcgccttggtga 602 Query: 330 gcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgatgc 389 ||||||| || ||||| || |||||||||||||||| |||||| ||||| |||||||||| Sbjct: 601 gcaccggcgtcgggatcggtgggttggaaccgaagactgtgagtggcacaaagacgatgc 542 Query: 390 cagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaact 449 | |||||||||||||||||||||||||||||| | || |||||||| ||||||||||||| Sbjct: 541 ctgggttctggctgttgaaggacacaaccatggatgcctccgtcttgccaacgttgaact 482 Query: 450 ggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgc 496 | ||||||||||| || |||||||||| ||| ||||| || |||||| Sbjct: 481 gaaagtgcatgagcccacgcgggatgaggaatgtctcaccagcacgc 435
>emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxidase precursor (OXO1 gene) Length = 675 Score = 238 bits (120), Expect = 1e-59 Identities = 213/244 (87%) Strand = Plus / Minus Query: 259 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 318 |||| ||||| |||| ||||||||||| |||||||| ||||||||||||||||||| || Sbjct: 675 ttaaaacccagcggcaaacttggacttcagaagttcgacgaccccggcctccacccttag 616 Query: 319 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 378 |||||||||||||||||| || |||||||| |||||||| | ||||||||| | ||||| Sbjct: 615 agccttggtgagcaccggcgtcgggatgggtgggttggagctgaagagtgtcaatggcac 556 Query: 379 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 438 ||||||||| || |||||||||||||||||||| || |||||| | || || |||||||| Sbjct: 555 gaagacgataccggggttctggctgttgaaggagactaccatggatgcctcggtcttacc 496 Query: 439 aacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcac 498 ||||||||||| |||||||||||||| || ||||||| ||| |||||||| || ||||| Sbjct: 495 gacgttgaactgcaagtgcatgaggccccgtgggatgaggaacgtctctccagcgcgcac 436 Query: 499 cacc 502 |||| Sbjct: 435 cacc 432
>ref|XM_469349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 ||||||||| |||||||||||| || || || ||||| ||||| |||||||| || |||| Sbjct: 679 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 620 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || ||||||||| || |||||||| |||||||| ||||| | ||||||||| ||||||| Sbjct: 619 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 560 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||||||||||||||||||||||||||| |||||| ||| |||||||| || |||| Sbjct: 559 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 500 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 ||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 499 tgaactggaagtgcatgagcccccgcgggatgacgaacgtctc 457
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 ||||||||| |||||||||||| || || || ||||| ||||| |||||||| || |||| Sbjct: 27487933 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 27487992 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || ||||||||| || |||||||| |||||||| ||||| | ||||||||| ||||||| Sbjct: 27487993 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 27488052 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||||||||||||||||||||||||||| |||||| ||| |||||||| || |||| Sbjct: 27488053 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 27488112 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 ||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 27488113 tgaactggaagtgcatgagcccccgcgggatgacgaacgtctc 27488155 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Plus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 27499857 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 27499916 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 27499917 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 27499976 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 27499977 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 27500036 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||||||| || | |||||||||||| ||||| |||||||| |||||| Sbjct: 27500037 tgaactggaagtgcatgagccccctcgggatgacgaacgtctcgccggcacggaccacc 27500095 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Plus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 27496876 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 27496935 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 27496936 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 27496995 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 27496996 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 27497055 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||||||| || | |||||||||||| ||||| |||||||| |||||| Sbjct: 27497056 tgaactggaagtgcatgagccccctcgggatgacgaacgtctcgccggcacggaccacc 27497114 Score = 165 bits (83), Expect = 2e-37 Identities = 152/175 (86%) Strand = Plus / Plus Query: 328 gagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgat 387 ||||||||| || ||||||||||||||||| || || | ||||||||| ||||||||||| Sbjct: 27492601 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 27492660 Query: 388 gccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaa 447 |||||||||||| |||||||||||||| |||||| ||| |||||||| || || ||||| Sbjct: 27492661 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 27492720 Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||| || | ||||||||| || ||||| || ||||| |||||| Sbjct: 27492721 ctggaagtgcatgagccctctcgggatgacaaacgtctcgcctgcacggaccacc 27492775 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 442 gttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 |||| ||||||||||||| || |||||||||||| |||| ||||| Sbjct: 33283074 gttgtactggaagtgcatcagcccgcgcgggatggcgaacgtctc 33283030 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 440 acgttgaactggaagtgcatgaggccgcgcgggatgacgaa 480 |||||| |||||||||| || | ||||||||||||||||| Sbjct: 33284962 acgttgtactggaagtggatcatcccgcgcgggatgacgaa 33285002 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 25030472 ctggaagtggacgaggccgcgcgggaagacgaa 25030440 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 acgaccccggcctccacccg 315 |||||||||||||||||||| Sbjct: 27191395 acgaccccggcctccacccg 27191414 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ttaaaatcaataattatata 25 |||||||||||||||||||| Sbjct: 21909258 ttaaaatcaataattatata 21909277
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 ||||||||| |||||||||||| || || || ||||| ||||| |||||||| || |||| Sbjct: 27579256 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 27579315 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || ||||||||| || |||||||| |||||||| ||||| | ||||||||| ||||||| Sbjct: 27579316 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 27579375 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||||||||||||||||||||||||||| |||||| ||| |||||||| || |||| Sbjct: 27579376 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 27579435 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 ||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 27579436 tgaactggaagtgcatgagcccccgcgggatgacgaacgtctc 27579478 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Plus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 27591180 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 27591239 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 27591240 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 27591299 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 27591300 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 27591359 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||||||| || | |||||||||||| ||||| |||||||| |||||| Sbjct: 27591360 tgaactggaagtgcatgagccccctcgggatgacgaacgtctcgccggcacggaccacc 27591418 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Plus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 27588199 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 27588258 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 27588259 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 27588318 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 27588319 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 27588378 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||||||| || | |||||||||||| ||||| |||||||| |||||| Sbjct: 27588379 tgaactggaagtgcatgagccccctcgggatgacgaacgtctcgccggcacggaccacc 27588437 Score = 165 bits (83), Expect = 2e-37 Identities = 152/175 (86%) Strand = Plus / Plus Query: 328 gagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgat 387 ||||||||| || ||||||||||||||||| || || | ||||||||| ||||||||||| Sbjct: 27583924 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 27583983 Query: 388 gccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaa 447 |||||||||||| |||||||||||||| |||||| ||| |||||||| || || ||||| Sbjct: 27583984 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 27584043 Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||| || | ||||||||| || ||||| || ||||| |||||| Sbjct: 27584044 ctggaagtgcatgagccctctcgggatgacaaacgtctcgcctgcacggaccacc 27584098 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 442 gttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 |||| ||||||||||||| || |||||||||||| |||| ||||| Sbjct: 33373584 gttgtactggaagtgcatcagcccgcgcgggatggcgaacgtctc 33373540 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 440 acgttgaactggaagtgcatgaggccgcgcgggatgacgaa 480 |||||| |||||||||| || | ||||||||||||||||| Sbjct: 33375472 acgttgtactggaagtggatcatcccgcgcgggatgacgaa 33375512 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 25121789 ctggaagtggacgaggccgcgcgggaagacgaa 25121757 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 acgaccccggcctccacccg 315 |||||||||||||||||||| Sbjct: 27282718 acgaccccggcctccacccg 27282737 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ttaaaatcaataattatata 25 |||||||||||||||||||| Sbjct: 21902287 ttaaaatcaataattatata 21902306
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 ||||||||| |||||||||||| || || || ||||| ||||| |||||||| || |||| Sbjct: 62581 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 62522 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || ||||||||| || |||||||| |||||||| ||||| | ||||||||| ||||||| Sbjct: 62521 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 62462 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||||||||||||||||||||||||||| |||||| ||| |||||||| || |||| Sbjct: 62461 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 62402 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 ||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 62401 tgaactggaagtgcatgagcccccgcgggatgacgaacgtctc 62359 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Minus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 53638 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 53579 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 53578 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 53519 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 53518 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 53459 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||||||| || | |||||||||||| ||||| |||||||| |||||| Sbjct: 53458 tgaactggaagtgcatgagccccctcgggatgacgaacgtctcgccggcacggaccacc 53400 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Minus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 50657 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 50598 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 50597 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 50538 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 50537 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 50478 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||||||| || | |||||||||||| ||||| |||||||| |||||| Sbjct: 50477 tgaactggaagtgcatgagccccctcgggatgacgaacgtctcgccggcacggaccacc 50419 Score = 165 bits (83), Expect = 2e-37 Identities = 152/175 (86%) Strand = Plus / Minus Query: 328 gagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgat 387 ||||||||| || ||||||||||||||||| || || | ||||||||| ||||||||||| Sbjct: 57913 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 57854 Query: 388 gccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaa 447 |||||||||||| |||||||||||||| |||||| ||| |||||||| || || ||||| Sbjct: 57853 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 57794 Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||| || | ||||||||| || ||||| || ||||| |||||| Sbjct: 57793 ctggaagtgcatgagccctctcgggatgacaaacgtctcgcctgcacggaccacc 57739
>dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137P21, full insert sequence Length = 998 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 ||||||||| |||||||||||| || || || ||||| ||||| |||||||| || |||| Sbjct: 805 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 746 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || ||||||||| || |||||||| |||||||| ||||| | ||||||||| ||||||| Sbjct: 745 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 686 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||||||||||||||||||||||||||| |||||| ||| |||||||| || |||| Sbjct: 685 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 626 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 ||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 625 tgaactggaagtgcatgagcccccgcgggatgacgaacgtctc 583
>emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase (oxO1 gene) Length = 934 Score = 214 bits (108), Expect = 2e-52 Identities = 213/248 (85%) Strand = Plus / Minus Query: 255 gaagttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccaccc 314 |||||||| |||||||||| ||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 781 gaagttaaaacccaccggcaaacttagacttgagaagttctacgaccccggcatccacac 722 Query: 315 gaagagccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcg 374 | || ||||||||||| || | |||||||| || |||||||| || |||| ||||| | Sbjct: 721 ggagcgccttggtgagtacggccgtggggattggtgggttggagccaaagacggtgagtg 662 Query: 375 gcacgaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtct 434 |||| ||||||||||||||||||||||| |||||||| || |||||| | || || |||| Sbjct: 661 gcacaaagacgatgccagggttctggctattgaaggatacgaccatggaagcctctgtct 602 Query: 435 taccaacgttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcac 494 | ||||||||||| |||||||||||||| || |||||||||| ||| |||||||| |||| Sbjct: 601 tgccaacgttgaattggaagtgcatgagcccacgcgggatgaggaacgtctctccagcac 542 Query: 495 gcaccacc 502 ||| |||| Sbjct: 541 gcagcacc 534
>ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Minus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 821 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 762 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 761 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 702 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 701 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 642 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||||||| || | |||||||||||| ||||| |||||||| |||||| Sbjct: 641 tgaactggaagtgcatgagccccctcgggatgacgaacgtctcgccggcacggaccacc 583
>ref|XM_469351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Minus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 679 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 620 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 619 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 560 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 559 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 500 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||||||| || | |||||||||||| ||||| |||||||| |||||| Sbjct: 499 tgaactggaagtgcatgagccccctcgggatgacgaacgtctcgccggcacggaccacc 441
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full insert sequence Length = 1028 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Minus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 832 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 773 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 772 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 713 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 712 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 653 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||||||| || | |||||||||||| ||||| |||||||| |||||| Sbjct: 652 tgaactggaagtgcatgagccccctcgggatgacgaacgtctcgccggcacggaccacc 594
>gb|AY108860.1| Zea mays PCO074541 mRNA sequence Length = 589 Score = 192 bits (97), Expect = 8e-46 Identities = 196/229 (85%) Strand = Plus / Minus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||||||||||||||||||||||| || |||||||| | ||| |||||||| || |||| Sbjct: 242 acccaccggcgaacttggacttgatgagatccacgacactggcgtccacccggagcgcct 183 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 ||| ||||||||| |||||||| ||||| ||| ||||| || ||||| |||||||||| Sbjct: 182 tggagagcaccggcgtggggatcggcggagaggagccgaacagcgtgaggggcacgaaga 123 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 |||||| || |||||||||||||| ||||| |||||| ||| ||| ||| || |||| Sbjct: 122 tgatgcccggtttctggctgttgaacgacaccaccatggtggcgtcctccttgccgacgt 63 Query: 444 tgaactggaagtgcatgaggccgcgcgggatgacgaaagtctctccggc 492 ||||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct: 62 tgaactggaagtgcacgaggccgcgcgggatgacgaacgtctccccggc 14
>ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 165 bits (83), Expect = 2e-37 Identities = 152/175 (86%) Strand = Plus / Minus Query: 328 gagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgat 387 ||||||||| || ||||||||||||||||| || || | ||||||||| ||||||||||| Sbjct: 621 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 562 Query: 388 gccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaa 447 |||||||||||| |||||||||||||| |||||| ||| |||||||| || || ||||| Sbjct: 561 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 502 Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaaagtctctccggcacgcaccacc 502 ||||||||||||||| || | ||||||||| || ||||| || ||||| |||||| Sbjct: 501 ctggaagtgcatgagccctctcgggatgacaaacgtctcgcctgcacggaccacc 447
>gb|AF261942.1|AF261942 Zea mays clone AW042316 germin-like protein 2 (GLP2) mRNA, partial cds Length = 591 Score = 163 bits (82), Expect = 7e-37 Identities = 175/206 (84%) Strand = Plus / Minus Query: 264 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 323 |||||||||||||||||||||||| || |||||||| | ||| |||||||| || |||| Sbjct: 211 acccaccggcgaacttggacttgatgagatccacgacactggcgtccacccggagcgcct 152 Query: 324 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 383 ||| ||||||||| |||||||| ||||| ||| ||||| || ||||| |||||||||| Sbjct: 151 tggagagcaccggcgtggggatcggcggagaggagccgaacagcgtgaggggcacgaaga 92 Query: 384 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 443 |||||| || |||||||||||||| ||||| |||||| ||| ||| ||| || |||| Sbjct: 91 tgatgcccggtttctggctgttgaacgacaccaccatggtggcgtcctccttgccgacgt 32 Query: 444 tgaactggaagtgcatgaggccgcgc 469 ||||||||||||||| |||||||||| Sbjct: 31 tgaactggaagtgcacgaggccgcgc 6
>ref|XM_470001.1| Oryza sativa (japonica cultivar-group), mRNA Length = 856 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 442 gttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 |||| ||||||||||||| || |||||||||||| |||| ||||| Sbjct: 534 gttgtactggaagtgcatcagcccgcgcgggatggcgaacgtctc 490
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 442 gttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 |||| ||||||||||||| || |||||||||||| |||| ||||| Sbjct: 39590 gttgtactggaagtgcatcagcccgcgcgggatggcgaacgtctc 39546 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 440 acgttgaactggaagtgcatgaggccgcgcgggatgacgaa 480 |||||| |||||||||| || | ||||||||||||||||| Sbjct: 41478 acgttgtactggaagtggatcatcccgcgcgggatgacgaa 41518
>dbj|AK062698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-A11, full insert sequence Length = 856 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 442 gttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 |||| ||||||||||||| || |||||||||||| |||| ||||| Sbjct: 534 gttgtactggaagtgcatcagcccgcgcgggatggcgaacgtctc 490
>gb|AF072694.1|AF072694 Oryza sativa germin-like protein 7 (GER7) mRNA, complete cds Length = 856 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 442 gttgaactggaagtgcatgaggccgcgcgggatgacgaaagtctc 486 |||| ||||||||||||| || |||||||||||| |||| ||||| Sbjct: 519 gttgtactggaagtgcatcagcccgcgcgggatggcgaacgtctc 475
>gb|AC009964.11| Homo sapiens BAC clone RP11-387G23 from 2, complete sequence Length = 197087 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 ttattaaaatcaataattatata 25 ||||||||||||||||||||||| Sbjct: 160283 ttattaaaatcaataattatata 160261
>emb|AL590445.1|CNS07EGC chromosome V of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 211018 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 154 atccagaagcttgaatatagtctcct 179 |||||||||||||||||||| ||||| Sbjct: 60107 atccagaagcttgaatatagcctcct 60082
>dbj|AB210620.1| Ciona intestinalis mRNA for p38 kinase, complete cds, clone: cinc009m21 Length = 3582 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cttgagaagttccacgaccccg 304 |||||||||||||||||||||| Sbjct: 987 cttgagaagttccacgaccccg 1008
>dbj|AK173857.1| Ciona intestinalis cDNA, clone:cicl006g22, full insert sequence Length = 1395 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cttgagaagttccacgaccccg 304 |||||||||||||||||||||| Sbjct: 987 cttgagaagttccacgaccccg 1008
>ref|XM_469032.1| Oryza sativa (japonica cultivar-group), mRNA Length = 996 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 480 ctggaagtggacgaggccgcgcgggaagacgaa 448
>ref|NM_187721.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 471 ctggaagtggacgaggccgcgcgggaagacgaa 439
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 146917 ctggaagtggacgaggccgcgcgggaagacgaa 146885
>gb|AC128667.3| Mus musculus BAC clone RP24-160B11 from chromosome 17, complete sequence Length = 164685 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 gtgagcttatccagaagcttg 166 ||||||||||||||||||||| Sbjct: 52119 gtgagcttatccagaagcttg 52099
>emb|AJ307410.1|YLI307410 Yarrowia lipolytica complete mitochondrial genome Length = 47916 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 tttattaaaatcaataattatatat 26 ||||||||||||||| ||||||||| Sbjct: 38622 tttattaaaatcaattattatatat 38646
>emb|AL450305.7| Human DNA sequence from clone RP11-426L17 on chromosome 6, complete sequence Length = 71463 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 aaaagaacaaatatgacaataataa 63 ||||||| ||||||||||||||||| Sbjct: 42576 aaaagaaaaaatatgacaataataa 42600
>emb|AL359894.9| Human DNA sequence from clone RP11-379C1 on chromosome 1 Contains the 5' end of gene KIAA1365 and a CpG island, complete sequence Length = 161040 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 aaatatgacaataataagaagcaat 71 ||||||||||||||||| ||||||| Sbjct: 76576 aaatatgacaataataataagcaat 76600
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 62279 ctggaagtggacgaggccgcgcgggaagacgaa 62247
>emb|BX247869.21| Zebrafish DNA sequence from clone CH211-67D2 in linkage group 21, complete sequence Length = 181119 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ttattaaaatcaataattatatatt 27 ||||||||||||||| ||||||||| Sbjct: 133155 ttattaaaatcaatatttatatatt 133179
>gb|AC009379.7| Drosophila melanogaster 3L BAC RP98-48M6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175963 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 aaatcaataattatatattcc 29 ||||||||||||||||||||| Sbjct: 166050 aaatcaataattatatattcc 166030
>gb|AC010563.6| Drosophila melanogaster 3L BAC RP98-9M20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185497 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 aaatcaataattatatattcc 29 ||||||||||||||||||||| Sbjct: 167675 aaatcaataattatatattcc 167695
>tpg|BK002213.1| TPA: TPA_inf: Drosophila melanogaster HDC10915 (HDC10915) gene, complete cds Length = 2264 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 aaatcaataattatatattcc 29 ||||||||||||||||||||| Sbjct: 1959 aaatcaataattatatattcc 1979
>gb|AC096766.3| Homo sapiens BAC clone RP11-678H22 from 4, complete sequence Length = 173836 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 aatcaaaagaacaaatatgac 55 ||||||||||||||||||||| Sbjct: 32054 aatcaaaagaacaaatatgac 32074
>gb|AC018953.11| Homo sapiens chromosome 8, clone RP11-573J24, complete sequence Length = 182712 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ttattaaaatcaataattata 23 ||||||||||||||||||||| Sbjct: 92644 ttattaaaatcaataattata 92664
>gb|AC091039.7| Homo sapiens chromosome 18, clone RP11-403A5, complete sequence Length = 168148 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 211 gatatatagaattacatattcatat 235 ||||||||||||||||||| ||||| Sbjct: 81128 gatatatagaattacatatgcatat 81152
>gb|AC069133.6| Homo sapiens BAC clone RP11-579E24 from 8, complete sequence Length = 201146 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ttattaaaatcaataattata 23 ||||||||||||||||||||| Sbjct: 11422 ttattaaaatcaataattata 11442
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 382 gacgatgccagggttctggctgttgaagg 410 ||||||||| ||||||| ||||||||||| Sbjct: 19617320 gacgatgccggggttctcgctgttgaagg 19617348
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 10166405 ctggaagtggacgaggccgcgcgggaagacgaa 10166437
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 113874 ctggaagtggacgaggccgcgcgggaagacgaa 113906
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 31719 ctggaagtggacgaggccgcgcgggaagacgaa 31751
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 aattacatattcatattgatc 240 ||||||||||||||||||||| Sbjct: 1216282 aattacatattcatattgatc 1216302
>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0605D08 Length = 144340 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 382 gacgatgccagggttctggctgttgaagg 410 ||||||||| ||||||| ||||||||||| Sbjct: 83606 gacgatgccggggttctcgctgttgaagg 83634
>dbj|AK061164.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-A06, full insert sequence Length = 925 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 542 ctggaagtggacgaggccgcgcgggaagacgaa 510
>dbj|AK059817.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C02, full insert sequence Length = 997 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 382 gacgatgccagggttctggctgttgaagg 410 ||||||||| ||||||| ||||||||||| Sbjct: 621 gacgatgccggggttctcgctgttgaagg 593
>gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67 of 83 of the complete sequence Length = 279088 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 aaatcaataattatatattcc 29 ||||||||||||||||||||| Sbjct: 123720 aaatcaataattatatattcc 123740
>gb|AC153018.4| Mus musculus BAC clone RP23-95J19 from chromosome 17, complete sequence Length = 223539 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gtgagcttatccagaagcttg 166 ||||||||||||||||||||| Sbjct: 57494 gtgagcttatccagaagcttg 57514
>gb|AF032974.1|AF032974 Oryza sativa germin-like protein 4 (GER4) mRNA, complete cds Length = 908 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 524 ctggaagtggacgaggccgcgcgggaagacgaa 492
>gb|L33781.1|ATHCPBP Arabidopsis thaliana (strain Ecotype RLD) cab3 promoter-binding protein mRNA, complete cds Length = 771 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 ccaacgttgaactggaagtgc 457 ||||||||||||||||||||| Sbjct: 127 ccaacgttgaactggaagtgc 107
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 448 ctggaagtgcatgaggccgcgcgggatgacgaa 480 ||||||||| | |||||||||||||| |||||| Sbjct: 91004 ctggaagtggacgaggccgcgcgggaagacgaa 91036
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 acgaccccggcctccacccg 315 |||||||||||||||||||| Sbjct: 113000 acgaccccggcctccacccg 112981
>gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, complete sequence Length = 216399 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 caataataagaagcaatacatttt 78 ||||||||||| |||||||||||| Sbjct: 192666 caataataagatgcaatacatttt 192643
>gb|AC113224.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-99C24, complete sequence Length = 198436 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 aatatgacaataataagaagcaat 71 |||||||||||||||| ||||||| Sbjct: 113904 aatatgacaataataataagcaat 113927
>emb|CR931798.8| Mouse DNA sequence from clone RP23-89A4 on chromosome 4, complete sequence Length = 83980 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 ggatatatagaattacatattcat 233 |||||||||| ||||||||||||| Sbjct: 70584 ggatatatagcattacatattcat 70607
>emb|Z73427.1|CEF58B3 Caenorhabditis elegans Cosmid F58B3, complete sequence Length = 21948 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 tggatatatagaattacatattca 232 ||||||| |||||||||||||||| Sbjct: 1881 tggatatctagaattacatattca 1858
>ref|XM_651633.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (8.t00081) partial mRNA Length = 1194 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctttattaaaatcaataatt 20 |||||||||||||||||||| Sbjct: 244 ctttattaaaatcaataatt 225
>ref|XM_961171.1| Plasmodium falciparum 3D7 hypothetical protein (PFF1365c) partial mRNA Length = 30864 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 aacaaatatgacaataataa 63 |||||||||||||||||||| Sbjct: 18442 aacaaatatgacaataataa 18461
>gb|BC090585.1| Xenopus tropicalis MGC69392 protein, mRNA (cDNA clone MGC:69392 IMAGE:5335334), complete cds Length = 4198 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caaaagaacaaatatgacaataat 61 |||||| ||||||||||||||||| Sbjct: 3979 caaaagtacaaatatgacaataat 3956
>emb|AL445705.8| Human DNA sequence from clone RP5-996C2 on chromosome 20 Contains part of a novel gene (KIAA0964), complete sequence Length = 57930 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tccacccgaagagccttggt 327 |||||||||||||||||||| Sbjct: 33619 tccacccgaagagccttggt 33638
>emb|AL356313.15| Human DNA sequence from clone RP11-531P20 on chromosome 13 Contains a novel gene, complete sequence Length = 143957 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 tattactatgaaatgtgagcttat 155 |||||||| ||||||||||||||| Sbjct: 905 tattactaggaaatgtgagcttat 928
>emb|AL139289.6| Human DNA sequence from clone RP1-92O14 on chromosome 1p33-34.2 Contains the 3' end of the TIE gene for tyrosine kinase with immunoglobulin and epidermal growth factor homology domains, the MPL gene for myeloproliferative leukemia virus oncogene, two novel genes, the CDC20 gene for CDC20 cell division cycle 20 homolog (S. cerevisiae), the ELOVL1 gene for elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1, the MED8 gene for mediator of RNA polymerase II transcription subunit 8 homolog (yeast) and the 5' end of the gene for a novel protein (LOC149469), complete sequence Length = 90433 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 aagcttgaatatagtctcct 179 |||||||||||||||||||| Sbjct: 49660 aagcttgaatatagtctcct 49641
>ref|NM_001030377.1| Xenopus tropicalis MGC69392 protein (MGC69392), mRNA Length = 4198 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caaaagaacaaatatgacaataat 61 |||||| ||||||||||||||||| Sbjct: 3979 caaaagtacaaatatgacaataat 3956
>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5 Length = 337203 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aacaaatatgacaataataa 63 |||||||||||||||||||| Sbjct: 89748 aacaaatatgacaataataa 89729
>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59 Length = 199199 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aaaatcaataattatatatt 27 |||||||||||||||||||| Sbjct: 78863 aaaatcaataattatatatt 78844
>emb|AL031326.1|ATF16G20 Arabidopsis thaliana DNA chromosome 4, BAC clone F16G20 (ESSAII project) Length = 97006 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aaaatcaataattatatatt 27 |||||||||||||||||||| Sbjct: 37331 aaaatcaataattatatatt 37312
>emb|CR788320.11| Zebrafish DNA sequence from clone DKEY-217F16 in linkage group 13, complete sequence Length = 174497 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 atatatagaattacatattcatat 235 |||||||||||||||||| ||||| Sbjct: 21576 atatatagaattacatatacatat 21553
>emb|AL645727.16| Mouse DNA sequence from clone RP23-20G7 on chromosome 1 Contains a cytochrome c oxidase subunit Vb (Cox5b) pseudogene, a ribosomal protein S2 (Rps2) pseudogene, the 5' end of the Nrp2 gene for neuropilin 2, the 3' end of the gene for an ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 19 (ALS2CR19) and two CpG islands, complete sequence Length = 218427 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cagggttctggctgttgaag 409 |||||||||||||||||||| Sbjct: 204747 cagggttctggctgttgaag 204766
>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains the gene for a novel protein (zgc:63880), the 3' end of the gene for a novel protein similar to vertebrate KCND2, the 5' end of the ing3 gene for inhibitor of growth family member 3 and a CpG island, complete sequence Length = 200582 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 aataagaagcaatacattttaact 82 ||||| |||||||||||||||||| Sbjct: 180556 aataaaaagcaatacattttaact 180533
>emb|BX284692.14| Zebrafish DNA sequence from clone CH211-282O22 in linkage group 17, complete sequence Length = 162970 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 aggataacttattcaatctt 132 |||||||||||||||||||| Sbjct: 30891 aggataacttattcaatctt 30872
>gb|AC093420.2| Homo sapiens chromosome 1 clone RP11-282K6, complete sequence Length = 193766 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 aagcttgaatatagtctcct 179 |||||||||||||||||||| Sbjct: 183638 aagcttgaatatagtctcct 183619
>gb|DQ019763.1| Arctosa cinerea 12S ribosomal RNA gene, partial sequence; mitochondrial Length = 279 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 atcaaaagaacaaatatgacaata 59 ||||||||||||||||| |||||| Sbjct: 175 atcaaaagaacaaatataacaata 152
>gb|AC159284.2| Mus musculus BAC clone RP23-318K10 from chromosome 6, complete sequence Length = 188553 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tttattaaaatcaataatta 21 |||||||||||||||||||| Sbjct: 23314 tttattaaaatcaataatta 23295
>ref|NM_069790.1| Caenorhabditis elegans Delta/Serrate/Lag-2 domain family member (dsl-5) (dsl-5) mRNA, complete cds Length = 909 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 tggatatatagaattacatattca 232 ||||||| |||||||||||||||| Sbjct: 63 tggatatctagaattacatattca 86
>gb|AC018680.4|AC018680 Homo sapiens BAC clone RP11-384E2 from 4, complete sequence Length = 181850 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 tgatcatttggggctcatgg 255 |||||||||||||||||||| Sbjct: 50000 tgatcatttggggctcatgg 49981
>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone BACR08I14, complete sequence Length = 190616 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 gtgagcaccggtgtggggatgggc 349 ||||||| |||||||||||||||| Sbjct: 42524 gtgagcagcggtgtggggatgggc 42547
>emb|BX828681.1|CNS0A2IF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL29ZF09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aaaatcaataattatatatt 27 |||||||||||||||||||| Sbjct: 847 aaaatcaataattatatatt 828
>gb|AC154003.4| Mus musculus 6 BAC RP24-92L16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200703 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 caataataagaagcaatacatttt 78 ||||||||||| |||||||||||| Sbjct: 119748 caataataagatgcaatacatttt 119771
>gb|AC117396.2| Homo sapiens 3 BAC RP11-89E16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147103 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 aattacatattcatattgat 239 |||||||||||||||||||| Sbjct: 17740 aattacatattcatattgat 17759
>gb|BT003875.1| Arabidopsis thaliana clone RAFL15-12-J09 (R20589) unknown protein (At4g23410) mRNA, complete cds Length = 1118 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aaaatcaataattatatatt 27 |||||||||||||||||||| Sbjct: 1062 aaaatcaataattatatatt 1043
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ttaaaatcaataattatata 25 |||||||||||||||||||| Sbjct: 99758 ttaaaatcaataattatata 99739
>emb|X61064.1|ALTRNALYS Acholeplasma laidlawii tRNA-Lys gene Length = 280 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttattaaaatcaataattat 22 |||||||||||||||||||| Sbjct: 192 ttattaaaatcaataattat 211
>dbj|AB028622.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MZN24 Length = 82348 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 taaaatcaataattatatat 26 |||||||||||||||||||| Sbjct: 79427 taaaatcaataattatatat 79408
>emb|BX571686.2| Carp DNA sequence from clone carpf-C114, complete sequence Length = 30720 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 aagaacaaatatgacaataataag 64 |||||||||||||| ||||||||| Sbjct: 2740 aagaacaaatatgaaaataataag 2763
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete sequence Length = 343833 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 gtgagcaccggtgtggggatgggc 349 ||||||| |||||||||||||||| Sbjct: 194828 gtgagcagcggtgtggggatgggc 194851
>gb|AF063866.1|AF063866 Melanoplus sanguinipes entomopoxvirus, complete genome Length = 236120 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 attacatattcatattgatcattt 244 |||||||||||||||| ||||||| Sbjct: 39218 attacatattcatattcatcattt 39241
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 acttgagaagttccacgacc 301 |||||||||||||||||||| Sbjct: 2624441 acttgagaagttccacgacc 2624460
>emb|BX005261.8| Zebrafish DNA sequence from clone DKEY-20I6 in linkage group 1, complete sequence Length = 228767 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 caaaagaacaaatatgacaa 57 |||||||||||||||||||| Sbjct: 92316 caaaagaacaaatatgacaa 92335
>dbj|AP006107.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29P11, TM0193, complete sequence Length = 102354 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tacatattcatattgatcat 242 |||||||||||||||||||| Sbjct: 64677 tacatattcatattgatcat 64696 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,767,265 Number of Sequences: 3902068 Number of extensions: 4767265 Number of successful extensions: 101285 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100654 Number of HSP's gapped (non-prelim): 627 length of query: 502 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 480 effective length of database: 17,147,199,772 effective search space: 8230655890560 effective search space used: 8230655890560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
