Clone Name | rbart54e06 |
---|---|
Clone Library Name | barley_pub |
>L2GL2_MOUSE (Q3TJ91) Lethal(2) giant larvae protein homolog 2 (Lethal giant| larvae-like protein 2) Length = 1027 Score = 30.0 bits (66), Expect = 2.5 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Frame = +2 Query: 158 IQIHFRPPHMIHPSCS-GLVVATTFQGRRPCLHFIKHLQLEDTPCCVPKNEAKA*CRDGC 334 +Q H R P+ I S GLVV QG R HF+ QLE+ + RDGC Sbjct: 194 LQEHPRDPNQILIGYSRGLVVIWDLQGSRALSHFLSSQQLENA----------SWQRDGC 243 Query: 335 ---DCHS 346 CHS Sbjct: 244 LIVTCHS 250
>ZP2_CANFA (P47983) Zona pellucida sperm-binding protein 2 precursor (Zona| pellucida glycoprotein ZP2) (Zona pellucida protein A) Length = 715 Score = 29.6 bits (65), Expect = 3.2 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -1 Query: 428 TFEDASLPCWFLSIDLEEYNMDLLFQRNYDSRIHP 324 T + ASLP W + +D EYN+D NY + HP Sbjct: 547 TMDPASLPQWNIVMDGCEYNLD-----NYRTTFHP 576
>SYFA_ACIAD (Q6F872) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 330 Score = 29.6 bits (65), Expect = 3.2 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +2 Query: 62 HDVNKVYSLLNTSQIEIPKRLISMLLDISEMQIQIHFRPPH 184 H + +Y NTS E+ LI++L + E +++ FRP + Sbjct: 210 HQIEGLYVAENTSFAELKGLLINLLNEFFEKDLKVRFRPSY 250
>ZP2_BOVIN (Q9BH10) Zona pellucida sperm-binding protein 2 precursor (Zona| pellucida glycoprotein ZP2) (Zona pellucida protein A) Length = 713 Score = 28.5 bits (62), Expect = 7.2 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 428 TFEDASLPCWFLSIDLEEYNMDLLFQRNYDSRIHP 324 T + ASLP W + +D EYN+D N+ + HP Sbjct: 545 TMDPASLPQWNIIVDGCEYNLD-----NHRTTFHP 574
>L2GL2_HUMAN (Q6P1M3) Lethal(2) giant larvae protein homolog 2 (HGL)| Length = 1020 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +2 Query: 158 IQIHFRPPHMIHPSCS-GLVVATTFQGRRPCLHFIKHLQLED 280 +Q H R P+ I S GLVV QG R HF+ QLE+ Sbjct: 194 LQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLEN 235
>L2GL2_PONPY (Q5RCX2) Lethal(2) giant larvae protein homolog 2| Length = 1019 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +2 Query: 158 IQIHFRPPHMIHPSCS-GLVVATTFQGRRPCLHFIKHLQLED 280 +Q H R P+ I S GLVV QG R HF+ QLE+ Sbjct: 194 LQEHPRDPNQILIGYSRGLVVIWDLQGSRVLYHFLSSQQLEN 235 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,843,907 Number of Sequences: 219361 Number of extensions: 1215716 Number of successful extensions: 2842 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2745 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2841 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)