Clone Name | rbart54e01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | OCS1_MAIZE (P24068) Ocs element-binding factor 1 (OCSBF-1) | 31 | 1.3 | 2 | BORL4_ARATH (Q9SUU1) Putative boron transporter-like protein 4 | 28 | 8.6 |
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>OCS1_MAIZE (P24068) Ocs element-binding factor 1 (OCSBF-1)| Length = 151 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = -1 Query: 460 QVAGAPVDIPE---IPDPLLRPWQSPFAPQLATAGGVPDAFQF 341 + +G +DI E DPLLRPWQ P+ P A G P + Sbjct: 110 EFSGVAMDIQEEMPADDPLLRPWQLPY-PAAAMPMGAPHMLHY 151
>BORL4_ARATH (Q9SUU1) Putative boron transporter-like protein 4| Length = 710 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 8/49 (16%) Frame = -3 Query: 323 RLVMPL--------HWTTMDMVAAHPPLLKNATSTTSLFISCLIMFDSC 201 RL +PL HWT + +A PPL A ++ I+ L FD C Sbjct: 282 RLELPLPWASESLYHWTVVKDMAKVPPLYILAAFIPAIMIAGLYFFDHC 330 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,509,185 Number of Sequences: 219361 Number of extensions: 1404570 Number of successful extensions: 3640 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3553 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3639 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)