ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart54d10 |
|---|---|
| Clone Library Name | barley_pub |
>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic| 7S globulin high-kDa subunit; Basic 7S globulin low-kDa subunit] Length = 427 Score = 67.4 bits (163), Expect = 1e-11 Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%) Frame = -1 Query: 411 PTVELVLQN-EAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHTMEDNLLEF 235 P+V+LV+ W + G + MV A+ G CLGV++GG PR + +G +E+NL+ F Sbjct: 338 PSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVF 397 Query: 234 DLQRARLGFSSSLL 193 DL R+R+GFS+S L Sbjct: 398 DLARSRVGFSTSSL 411
>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:| Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin 2 low-kDa subunit] Length = 433 Score = 65.1 bits (157), Expect = 6e-11 Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%) Frame = -1 Query: 411 PTVELVLQN-EAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHTMEDNLLEF 235 P+V+LV+ W + G + MV A+ G CLGV++GG PR V +G +E+ L+ F Sbjct: 344 PSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEVTLGTRQLEEKLMVF 403 Query: 234 DLQRARLGFSSSLL 193 DL R+R+GFS+S L Sbjct: 404 DLARSRVGFSTSSL 417
>RAD52_MOUSE (P43352) DNA repair protein RAD52 homolog| Length = 420 Score = 33.1 bits (74), Expect = 0.26 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2 Query: 158 PRRKLLQV-VCRNSREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPP 334 PR+ L V + + RE+ PS+ + R NS R + + P +V T+P +S+PP Sbjct: 180 PRQLPLDVDLTKTKREDFEPSVEQARYNSCRQNEALGLPKPQEV-------TSPCRSSPP 232 Query: 335 LAATIELAPNTTHDAASFCNTSSTV 409 + I+L D +S C+ ++T+ Sbjct: 233 HDSNIKL--QGAKDISSSCSLAATL 255
>ASP1_ORYSA (Q6YNY7) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1)| (Nucellin-like protein) Length = 410 Score = 33.1 bits (74), Expect = 0.26 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 3/50 (6%) Frame = -1 Query: 348 MVAAKGGALCLGVVDGGAAPRT---SVVIGGHTMEDNLLEFDLQRARLGF 208 ++ ++ G +CLG++DG + + +IGG TM D ++ +D +R+ LG+ Sbjct: 342 LIISQEGHVCLGILDGSKEHPSLAGTNLIGGITMLDQMVIYDSERSLLGW 391
>GUNC_CELFI (P14090) Endoglucanase C precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase C) (Cellulase C) Length = 1101 Score = 31.6 bits (70), Expect = 0.76 Identities = 16/54 (29%), Positives = 24/54 (44%) Frame = -1 Query: 411 PTVELVLQNEAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHTMED 250 P E + WV +G + + GALC+ V G A VV+ G +E+ Sbjct: 35 PIGEGTFDDGPEGWVAYGTDGPLDTSTGALCVAVPAGSAQYGVGVVLNGVAIEE 88
>CD5_BOVIN (P19238) T-cell surface glycoprotein CD5 precursor (Lymphocyte| antigen T1/Leu-1) Length = 495 Score = 31.6 bits (70), Expect = 0.76 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +2 Query: 209 NPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPP 334 N SL R R S + PP TT +PP+TTP +APP Sbjct: 117 NCSLNRGRQVDSLALICLEPPRTTAPPTTSPPTTTPEPTAPP 158
>TBC12_HUMAN (O60347) TBC1 domain family member 12| Length = 769 Score = 30.4 bits (67), Expect = 1.7 Identities = 19/57 (33%), Positives = 23/57 (40%) Frame = +2 Query: 158 PRRKLLQVVCRNSREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSA 328 P R+LLQ + E+L P L C P+ GA PPS PR A Sbjct: 59 PPRQLLQRYLAAAGEQLEPGLCYC-------------PLPAGQAGAPPPSAAPRSDA 102
>SOX4_HUMAN (Q06945) Transcription factor SOX-4| Length = 474 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 138 PFHLLSTQGGSCCRSSAGTAGRS*TRASPAADRTPA 245 P L +G C + +GRS +SPAA R+PA Sbjct: 321 PLGLYEEEGAGCSPDAPSLSGRSSAASSPAAGRSPA 356
>EPAS1_RAT (Q9JHS1) Endothelial PAS domain-containing protein 1 (EPAS-1)| (Hypoxia-inducible factor 2 alpha) (HIF-2 alpha) (HIF2 alpha) Length = 874 Score = 30.0 bits (66), Expect = 2.2 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = -2 Query: 239 SSICSGRGS-GSAPPCCSGRRPATTSALGRQQMEWHPD 129 S+I GS GS PPCC +S GR W PD Sbjct: 604 STIFFDAGSKGSLPPCCGQASTPLSSMGGRSNTPWPPD 641
>PHSG_CHLMU (Q9PKE6) Glycogen phosphorylase (EC 2.4.1.1)| Length = 813 Score = 30.0 bits (66), Expect = 2.2 Identities = 19/81 (23%), Positives = 34/81 (41%) Frame = -1 Query: 414 VPTVELVLQNEAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHTMEDNLLEF 235 +P +L Q A G +M A GAL +G +DG ++ + H ++++ F Sbjct: 639 IPATDLSEQISTAGMEASGTGNMKFALNGALTIGTMDG-----ANIEMAEHIGKEHMFIF 693 Query: 234 DLQRARLGFSSSLLFRQTTCN 172 L + + + Q CN Sbjct: 694 GLLEEEISALRNEYYPQGICN 714
>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)| Length = 1176 Score = 30.0 bits (66), Expect = 2.2 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Frame = +2 Query: 176 QVVCRNSRE-ELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAP----PLA 340 Q +C + R L+ + S SS PP +PPST PR S+P P + Sbjct: 978 QQMCPHKRTFALSDGFVGTDPSPSSCSSSALPP--------SPPSTPPRSSSPVTSPPQS 1029 Query: 341 ATIELAPNTTHDAASFCNTS 400 T P TT A+S C T+ Sbjct: 1030 PTSSATPATT--ASSSCTTN 1047
>EPAS1_HUMAN (Q99814) Endothelial PAS domain-containing protein 1 (EPAS-1)| (Member of PAS protein 2) (MOP2) (Hypoxia-inducible factor 2 alpha) (HIF-2 alpha) (HIF2 alpha) (HIF-1 alpha-like factor) (HLF) Length = 870 Score = 30.0 bits (66), Expect = 2.2 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = -2 Query: 239 SSICSGRGS-GSAPPCCSGRRPATTSALGRQQMEWHPD 129 SSI GS S PPCC +S GR +W PD Sbjct: 605 SSIFFDAGSKASLPPCCGQASTPLSSMGGRSNTQWPPD 642
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 29.6 bits (65), Expect = 2.9 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Frame = +2 Query: 134 DAIPFVVYP-RRKLLQVVCRN--SREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPP 304 D+ P V+ P R+++ R SR + S R + ++ +S P + AAP Sbjct: 287 DSSPPVMLPFERRIIPYNLRPLPSRSFTSDSFPAARYSPAKTNSPPSSPASAAPASAAPA 346 Query: 305 STTPRQSAPPLAATIELAPNTTHDAAS 385 S P +AP AA AP + A++ Sbjct: 347 SAAPASAAPASAAPASAAPASAAPASA 373 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +2 Query: 230 RSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAAS 385 ++NS S P + AAP S P +AP AA AP + A+S Sbjct: 327 KTNSPPSSPASAAPASAAPASAAPASAAPASAAPASAAPASAAPASAAPASS 378
>SEF1_YEAST (P34228) Suppressor protein SEF1| Length = 1057 Score = 29.6 bits (65), Expect = 2.9 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 15/122 (12%) Frame = +2 Query: 56 RGKHTNKF*LQSEQRKH-----------TYHLLQSHPDAIPFVVYPRRKLLQVVCRNSRE 202 +G +TNKF +E H + L+ + P+ +P ++ + NS+E Sbjct: 194 QGSNTNKFKANNEASSHMTLRASSLAQDSKGLVATEPNKLPPLLND-----SALPNNSKE 248 Query: 203 ELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPST----TPRQSAPPLAATIELAPNTT 370 L P+L ++ + P + + +P +T T + PP AAT +A N Sbjct: 249 SLPPALQMAFYKNNSAGNTPNGPFSPIQKTYSPHTTSTTVTTTTNQPPFAATSHVATNNN 308 Query: 371 HD 376 D Sbjct: 309 AD 310
>CD5_MOUSE (P13379) T-cell surface glycoprotein CD5 precursor (Lymphocyte| antigen Ly-1) (Lyt-1) Length = 494 Score = 29.6 bits (65), Expect = 2.9 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%) Frame = +2 Query: 176 QVVCRNSREELNPSLARCRSNSSRLS----SIVC--PPITTDVRGAAPPSTTPRQSAPP 334 QV C+ S S++ C + SS+ S++C P TT PP+T P +APP Sbjct: 103 QVFCQGSPW----SISNCNNTSSQDQCLPLSLICLEPQRTTPPPTTTPPTTVPEPTAPP 157
>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein| 7) (Protein archipelago) Length = 1326 Score = 29.6 bits (65), Expect = 2.9 Identities = 14/46 (30%), Positives = 27/46 (58%) Frame = -1 Query: 399 LVLQNEAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGH 262 +VL +E++++ + +NS+ + G A +GVV + T + GGH Sbjct: 89 VVLDDESSTFEISSSNSLPTSAGAASTVGVVAVDDSSSTDTLNGGH 134
>GSK3H_DICDI (P51136) Glycogen synthase kinase-3 homolog (EC 2.7.11.26) (GSK-3)| Length = 467 Score = 29.6 bits (65), Expect = 2.9 Identities = 21/67 (31%), Positives = 35/67 (52%) Frame = +2 Query: 206 LNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAAS 385 L P+LA SN S S+ + +A PSTT S+ P + ++ +P+TT+ +S Sbjct: 392 LFPNLAISSSNQSSSSNSNANVSSNLNSHSASPSTTSSSSSTPNSIPVQ-SPSTTNTTSS 450 Query: 386 FCNTSST 406 N ++T Sbjct: 451 TTNNTTT 457
>FANCA_MOUSE (Q9JL70) Fanconi anemia group A protein homolog (Protein FACA)| Length = 1439 Score = 29.6 bits (65), Expect = 2.9 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 6/101 (5%) Frame = +2 Query: 62 KHTNKF*LQSEQRKHTY------HLLQSHPDAIPFVVYPRRKLLQVVCRNSREELNPSLA 223 K N L++ R HT+ LLQSHPD+ ++ R L R+ E++ S Sbjct: 169 KAQNSLLLEAMWRLHTHSVVSLQELLQSHPDSEAMAMWLFRNL-----RSLCEQIGASCP 223 Query: 224 RCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAAT 346 + + LS +V I+ +G++ P P AT Sbjct: 224 SPDTTEAMLSGLVQLLISRGFQGSSDPRRLVEPERLPQVAT 264
>EPAS1_MOUSE (P97481) Endothelial PAS domain-containing protein 1 (EPAS-1)| (Hypoxia-inducible factor 2 alpha) (HIF-2 alpha) (HIF2 alpha) (HIF-1 alpha-like factor) (MHLF) (HIF-related factor) (HRF) Length = 874 Score = 29.3 bits (64), Expect = 3.7 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = -2 Query: 239 SSICSGRGS-GSAPPCCSGRRPATTSALGRQQMEWHPD 129 SSI GS GS PCC +S GR +W PD Sbjct: 604 SSIFFDAGSKGSLSPCCGQASTPLSSMGGRSNTQWPPD 641
>Y801_DEIRA (Q9RW68) Putative carotenoid cyclase DR0801| Length = 410 Score = 29.3 bits (64), Expect = 3.7 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = -1 Query: 384 EAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGG 265 E+ WV F N+ A GG L G G P + + G Sbjct: 244 ESEEWVAFPMNAQAPAPGGVLAYGAAAGRVHPVSGFQVAG 283
>PHSG_CHLTR (O84250) Glycogen phosphorylase (EC 2.4.1.1)| Length = 814 Score = 29.3 bits (64), Expect = 3.7 Identities = 19/81 (23%), Positives = 33/81 (40%) Frame = -1 Query: 414 VPTVELVLQNEAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHTMEDNLLEF 235 +P +L Q A G +M A GAL +G +DG ++ + H ++++ F Sbjct: 639 IPATDLSEQISTAGMEASGTGNMKFALNGALTIGTMDG-----ANIEMAEHIGKEHMFIF 693 Query: 234 DLQRARLGFSSSLLFRQTTCN 172 L + + Q CN Sbjct: 694 GLLEEEISELRKEYYPQGICN 714
>HMSH_DROME (Q03372) Muscle segmentation homeobox (Protein drop) (Protein msh)| Length = 515 Score = 29.3 bits (64), Expect = 3.7 Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 20/113 (17%) Frame = +2 Query: 104 HTYHLLQSHPDAIPFVVYPRRKLLQVVCRNSREELNPSLARCRSNSSRLSSIVCPPITTD 283 H HLLQ H +++ Q ++P +SRLS+ + D Sbjct: 88 HQQHLLQQHQQH-----QQQQQQQQQAAALQLAAVHPPAHHLHKTTSRLSNFSVASLLAD 142 Query: 284 VRGAAPP--------------STTPRQSA------PPLAATIELAPNTTHDAA 382 R PP +T+P A PP +A ++ NT H AA Sbjct: 143 TRPRTPPNQAADGPQNLTSSAATSPISQASSTPPPPPASAAAQVPANTFHPAA 195
>ADA1D_MOUSE (P97714) Alpha-1D adrenergic receptor (Alpha 1D-adrenoceptor)| (Alpha 1D-adrenoreceptor) (Alpha-1A adrenergic receptor) Length = 562 Score = 28.9 bits (63), Expect = 4.9 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Frame = +2 Query: 167 KLLQVVCRNSREELNPSLARCRSNSSRLSSI-VCP-PITTDVRGAAPPSTTPR 319 +LL+ CR R L PSL ++ R ++ +CP P RG+ P TPR Sbjct: 409 RLLRCQCRRRRRRLWPSLRPPLASLDRRPALRLCPQPAHRTPRGSPSPHCTPR 461
>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related| protein E74B) Length = 883 Score = 28.9 bits (63), Expect = 4.9 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Frame = +2 Query: 233 SNSSRLSSIVCPPITTDVRGAAPP--STTPRQSAPPLAATIE 352 S+SS LSS P+ + V +PP + P +++PP A ++ Sbjct: 47 SSSSSLSSATPTPVASPVTPTSPPPAAAAPAEASPPAGAELQ 88
>D103A_PANTR (Q95JD2) Beta-defensin 103A precursor (Defensin, beta 103A)| (Defensin, beta 103) (Beta-defensin 3) (DEFB-3) (BD-3) (cBD-3) Length = 67 Score = 28.9 bits (63), Expect = 4.9 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Frame = +3 Query: 30 LFKQPKQNPGG--NTQTNFDCNLNNASTHIIFCNPIRMPFHLLSTQGGSCCR 179 LF P GG NT + C + ++ C P ST+G CCR Sbjct: 13 LFLVPVPGHGGIINTLQKYYCRVRGGRCAVLTCLPKEEQIGKCSTRGRKCCR 64
>D103A_HUMAN (P81534) Beta-defensin 103A precursor (Beta-defensin 3) (DEFB-3)| (BD-3) (hBD-3) (HBD3) (Defensin-like protein) Length = 67 Score = 28.9 bits (63), Expect = 4.9 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Frame = +3 Query: 30 LFKQPKQNPGG--NTQTNFDCNLNNASTHIIFCNPIRMPFHLLSTQGGSCCR 179 LF P GG NT + C + ++ C P ST+G CCR Sbjct: 13 LFLVPVPGHGGIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKCCR 64
>L100_ADEP3 (Q9YTR7) Late 100 kDa protein| Length = 838 Score = 28.5 bits (62), Expect = 6.4 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +2 Query: 233 SNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCNTSST 406 S +S L S P + PP P S PP + P T DA C++SS+ Sbjct: 6 SAASELGSSAAPTLPPP-----PPPPPPPTSPPPSLQQRQQEPTETDDAEDTCSSSSS 58
>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1| light chain LC1] Length = 2468 Score = 28.5 bits (62), Expect = 6.4 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +2 Query: 209 NPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASF 388 +P A + +S ++S + P V AA P+TTP A + N + +AS Sbjct: 2271 SPKPAGLKESSDKVSRVASPKKKESVEKAAKPTTTPEVKAARGEEKDKETKNAANASASK 2330 Query: 389 CNTSSTVG 412 ++T G Sbjct: 2331 SAKTATAG 2338
>PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2364 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +1 Query: 109 ISSSAIPSGCHSICCLPKAEVVAGRLPEQQGGAEPEP 219 + S++P P+AEV A PE GGA P Sbjct: 1924 VEVSSVPESSGETSAYPEAEVGASAAPEASGGASGSP 1960
>DPOLA_LEIDO (O00874) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1339 Score = 28.5 bits (62), Expect = 6.4 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 130 SGCHSICCLPKAEVVAGRLPEQQGGAEPEPRPLQIELQQ 246 SG +I LP A+ A +L + GA+P P+P Q L Q Sbjct: 48 SGDLTIPQLPSAKKAAKKLRKPPSGAKPTPKPKQQTLAQ 86
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 28.5 bits (62), Expect = 6.4 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +2 Query: 269 PITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCNTSST 406 P+ GAAPPS +P A AA+ A +++ ++S ++S++ Sbjct: 565 PLAPASAGAAPPSASPSSQAAVAAASSSSASSSSASSSSASSSSAS 610
>CXGS_CONGE (P15472) Conotoxin GS (CGS)| Length = 34 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = -2 Query: 230 CSGRGSGSAPPCCSGRR 180 CSGRGS P CC G R Sbjct: 2 CSGRGSRCPPQCCMGLR 18
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 28.1 bits (61), Expect = 8.3 Identities = 28/108 (25%), Positives = 48/108 (44%) Frame = +2 Query: 47 TKPRGKHTNKF*LQSEQRKHTYHLLQSHPDAIPFVVYPRRKLLQVVCRNSREELNPSLAR 226 T+PR +H ++ S +R+ + S P PRR R SR +P R Sbjct: 294 TRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTP----PRRMPPPPRHRRSR---SPGRRR 346 Query: 227 CRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTT 370 RS++S S ++ R +PP P++++ P T L+P+ + Sbjct: 347 RRSSASLSGS---SSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSAS 391
>TROAP_HUMAN (Q12815) Trophinin-associated protein (Tastin) (Trophinin-assisting| protein) Length = 778 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -2 Query: 209 SAPPCCSGRRPATTSALGRQQMEWHP 132 S PPCCS PATTS + Q HP Sbjct: 657 SLPPCCSQWAPATTSLIFSSQ---HP 679
>OPSG_CAVPO (Q9R024) Green-sensitive opsin (Green cone photoreceptor pigment)| Length = 364 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = -2 Query: 164 ALGRQQMEWHPDGIAEDDMCACVVQIAVKICLCVSPWVLFWLF 36 A+ +QQ E AE ++ VV + + CLC P+ F F Sbjct: 248 AVAKQQKESESTQKAEKEVTRMVVVMVLAYCLCWGPYAFFACF 290
>KIC1_YEAST (P38692) Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase| that interacts with CDC31) (N-rich kinase 1) Length = 1080 Score = 28.1 bits (61), Expect = 8.3 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = +1 Query: 37 NSQNKTQGETHKQILTAI*TTQAHISSSAIPSGCHSICCLPKAEVVAGRLPEQQGGAEPE 216 N+ K T +A +T A IS IPSG L A A + G P Sbjct: 956 NTTIKANSTTIATSSSAAASTTAPISQQTIPSGTQFNHILSSAATAANSVNSLGFGMCPP 1015 Query: 217 PRPLQIEL 240 P+ LQ+E+ Sbjct: 1016 PQSLQMEM 1023
>YKC2_CAEEL (P41993) Hypothetical protein B0280.2| Length = 627 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +2 Query: 209 NPSLARCRSNSSRL-SSIVCPPITT---DVRGAAPPSTTPRQSAPP 334 +PS+ RS S R+ S+ P I T R A P T P+Q+ PP Sbjct: 296 DPSVLLNRSTSVRVRGSLSTPRIPTHRDSYRSATKPDTVPKQTPPP 341
>S4A7_MOUSE (Q8BTY2) Sodium bicarbonate cotransporter 3 (Solute carrier family 4| member 7) Length = 1034 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/99 (18%), Positives = 44/99 (44%) Frame = +2 Query: 53 PRGKHTNKF*LQSEQRKHTYHLLQSHPDAIPFVVYPRRKLLQVVCRNSREELNPSLARCR 232 P K + + ++++ +LQ D + + + R LLQ+ + + ++PS+ Sbjct: 923 PESKKKKEDDKKKKEKEEAERMLQDDEDTV-HLPFERGSLLQIPVKTLKYSIDPSVVNIS 981 Query: 233 SNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATI 349 ++ + + T+ P+T+P + P++ TI Sbjct: 982 DEMAKTAQWKALSMNTENAKVTRPNTSPEK---PVSVTI 1017
>SOX4_MOUSE (Q06831) Transcription factor SOX-4| Length = 440 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 138 PFHLLSTQGGSCCRSSAGTAGRS*TRASPAADRTPA 245 P L G C +GRS +SPAA R+PA Sbjct: 289 PLGLYEDGGPGCSPDGRSLSGRSSAASSPAASRSPA 324
>HUWE1_MOUSE (Q7TMY8) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (E3Histone) Length = 4377 Score = 28.1 bits (61), Expect = 8.3 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 9/97 (9%) Frame = +2 Query: 149 VVYPRRKLLQVVCRNSREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSA 328 + P K+ +V +S + + S ++ ++ P T P +TTP SA Sbjct: 3463 IALPENKVSEVQTNSSNSGSSTAATSNTSTTTTTTTTATAPTPTP-----PAATTPVTSA 3517 Query: 329 PPLAA-----TIELAPNTT----HDAASFCNTSSTVG 412 P L A TI +A +TT A + +TS+T G Sbjct: 3518 PALVAATAISTITVAASTTVTTPTTATTTVSTSTTKG 3554
>AXUD1_HUMAN (Q96S65) Axin-1 up-regulated gene 1 protein (TGF-beta-induced| apoptosis protein 3) (TAIP-3) (URAX1 protein) Length = 589 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 109 ISSSAIPSGCHSICCLPKAEVVAGRLPEQQGGAEPEPRP 225 +SSS+ SGC S C P + V E++G + P P Sbjct: 19 VSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLP 57
>MTG8_HUMAN (Q06455) Protein CBFA2T1 (Protein MTG8) (Protein ETO) (Eigth twenty| one protein) (Cyclin D-related protein) (Zinc finger MYND domain-containing protein 2) Length = 604 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +2 Query: 221 ARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAP 361 A+ + ++ +SS V P PP+ TPR + P +TIE P Sbjct: 557 AQQQGDTPAVSSSVTPNSGAGSPMDTPPAATPRSTTPGTPSTIETTP 603
>PHSG_CHLPN (Q9Z8N1) Glycogen phosphorylase (EC 2.4.1.1)| Length = 824 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/81 (24%), Positives = 34/81 (41%) Frame = -1 Query: 414 VPTVELVLQNEAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHTMEDNLLEF 235 +P +L Q A G +M A GAL +G +DG ++ + H ++N+ F Sbjct: 644 IPGTDLSEQISTAGMEASGTGNMKFALNGALTIGTMDG-----ANIEMAEHIGKENMFIF 698 Query: 234 DLQRARLGFSSSLLFRQTTCN 172 L ++ QT C+ Sbjct: 699 GLLEEQIVQLRREYCPQTICD 719
>OPSR_CANFA (O18914) Red-sensitive opsin (Red cone photoreceptor pigment)| (Fragment) Length = 273 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = -2 Query: 164 ALGRQQMEWHPDGIAEDDMCACVVQIAVKICLCVSPWVLFWLF 36 A+ +QQ E AE ++ VV + + CLC P+ F F Sbjct: 201 AVAKQQKESESTQKAEKEVTRMVVVMVLAYCLCWGPYTFFACF 243
>MUC1_MESAU (Q60528) Mucin-1 precursor| Length = 676 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/66 (25%), Positives = 29/66 (43%) Frame = +2 Query: 212 PSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFC 391 P+ + S ++ + S P+T+ +A SAPP ++ + A H +S Sbjct: 89 PTSSAVNSATTPVHSGSSAPVTSSAVNSATTPVHSGSSAPPTSSAVNSATTPVHSGSSAP 148 Query: 392 NTSSTV 409 TSS V Sbjct: 149 VTSSAV 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,094,663 Number of Sequences: 219361 Number of extensions: 1233854 Number of successful extensions: 5825 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 5259 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5791 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
