Clone Name | rbart54d08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TNR19_MOUSE (Q9JLL3) Tumor necrosis factor receptor superfamily ... | 30 | 1.6 |
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>TNR19_MOUSE (Q9JLL3) Tumor necrosis factor receptor superfamily member 19| precursor (Toxicity and JNK inducer) (TRADE) Length = 416 Score = 30.0 bits (66), Expect = 1.6 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%) Frame = -2 Query: 251 LVGTFRKANCSHTCNSIL-QCIPVCIRQSMLL 159 LV F++ANCSHT +++ C+P R++ L+ Sbjct: 97 LVNRFQRANCSHTSDAVCGDCLPGFYRKTKLV 128 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,109,170 Number of Sequences: 219361 Number of extensions: 575825 Number of successful extensions: 1184 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1184 length of database: 80,573,946 effective HSP length: 61 effective length of database: 67,192,925 effective search space used: 1612630200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)