ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart54d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192167.1| Oryza sativa (japonica cultivar-group), predic... 323 3e-85
2dbj|AK099894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
3dbj|AK066034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 8e-83
4ref|XM_475848.1| Oryza sativa (japonica cultivar-group), predic... 159 1e-35
5dbj|AK061016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
6gb|AY110197.1| Zea mays CL41614_1 mRNA sequence 157 4e-35
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
8dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
9ref|NM_101701.2| Arabidopsis thaliana aminoacyl-tRNA hydrolase A... 66 1e-07
10emb|BX813553.1|CNS0AAJW Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
11gb|BT005284.1| Arabidopsis thaliana At1g18440 mRNA, complete cds 66 1e-07
12dbj|AK119054.1| Arabidopsis thaliana At1g18440 mRNA for unknown ... 66 1e-07
13gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete se... 60 8e-06
14gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
15gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
17gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.029
18gb|AC106033.4| Homo sapiens chromosome 18, clone CTD-2025K11, co... 46 0.12
19gb|AC152123.1| Genomic sequence for broccoli [Brassica oleracea ... 46 0.12
20emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 44 0.46
21gb|AC149372.1| Phakopsora pachyrhizi clone JGIAFNA-5A1, complete... 42 1.8
22gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosom... 42 1.8
23gb|AE004290.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 42 1.8
24emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 42 1.8
25gb|AC016957.49| Homo sapiens 12 BAC RP11-50I19 (Roswell Park Can... 42 1.8
26emb|AL928988.14| Mouse DNA sequence from clone RP23-402M7 on chr... 42 1.8
27gb|AC131678.4| Mus musculus BAC clone RP23-333L1 from chromosome... 40 7.1
28gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome 40 7.1
29gb|AC139579.3| Mus musculus BAC clone RP23-139E6 from chromosome... 40 7.1
30ref|XM_445293.1| Candida glabrata CBS138, CAGL0C02673g partial mRNA 40 7.1
31gb|AC132252.2| Mus musculus BAC clone RP24-450A24 from chromosom... 40 7.1
32gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome... 40 7.1
33ref|XM_764518.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 7.1
34ref|XM_764519.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 7.1
35gb|AC101827.10| Mus musculus chromosome 15, clone RP24-426P14, c... 40 7.1
36gb|AC160063.12| Mus musculus 10 BAC RP24-502H14 (Roswell Park Ca... 40 7.1
37gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 7.1
38emb|AL596092.8| Human DNA sequence from clone RP11-351N4 on chro... 40 7.1
39gb|AC010282.6| Homo sapiens chromosome 5 clone CTC-555I19, compl... 40 7.1
40emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast g... 40 7.1
41gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 7.1
42emb|CR380949.1| Candida glabrata strain CBS138 chromosome C comp... 40 7.1
43emb|AL935261.1| Lactobacillus plantarum strain WCFS1 complete ge... 40 7.1
44gb|AY189120.1| Mus musculus nebulin (Neb) gene, complete sequence 40 7.1
45emb|CR352228.11| Zebrafish DNA sequence from clone CH211-104F13 ... 40 7.1
46emb|BX547993.5| Zebrafish DNA sequence from clone CH211-282E16 i... 40 7.1
47gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Can... 40 7.1
48gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, comp... 40 7.1
49gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum)... 40 7.1
50gb|AE014133.1| Streptococcus mutans UA159, complete genome 40 7.1
51gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete... 40 7.1
52gb|AC102367.35| Mus musculus chromosome 3, clone RP23-211J6, com... 40 7.1
53dbj|AB073156.1| Arabidopsis thaliana DNA, chromosome 4 centromer... 40 7.1
54gb|AC160060.20| Mus musculus 10 BAC RP23-360L4 (Roswell Park Can... 40 7.1
55emb|AL844571.8| Mouse DNA sequence from clone RP23-224C23 on chr... 40 7.1 
>ref|NM_192167.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 801

 Score =  323 bits (163), Expect = 3e-85
 Identities = 256/287 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 tcatctattcagcatttcggatgattgggcggtgttcacgaaagtagcgctcttgttgaa 300
           ||||||||||| |||||| || || || |||||||||||  |||| ||||||||||||||
Sbjct: 801 tcatctattcaacatttcagaggactgtgcggtgttcacataagttgcgctcttgttgaa 742

                                                                       
Query: 301 tccttcaagtgtcattattcttattgcatccaagcccctatggaatgtgaaatcaagctc 360
           ||| ||||||| ||||||||| | ||| ||||||||||||||||| | ||||||||||||
Sbjct: 741 tccctcaagtgccattattctaactgcctccaagcccctatggaaagcgaaatcaagctc 682

                                                                       
Query: 361 ttcttgttcttttttggtgaatggcctgagaacaaagttggcaggatccatcttcccagg 420
           ||| ||||||||| || | ||||| | ||||||||| |||||||||||||||||||||||
Sbjct: 681 ttcctgttcttttctgttaaatggtcggagaacaaaattggcaggatccatcttcccagg 622

                                                                       
Query: 421 tggtcgtccaatgccaattcttagacgtggaaaatcacgattttgtttgagatggttgat 480
           |||||||||||||||||||||||||||||| |||||||| || || || | |||||||||
Sbjct: 621 tggtcgtccaatgccaattcttagacgtgggaaatcacggttctgcttcaaatggttgat 562

                                                          
Query: 481 aatgcttctcatcccattatgcccgccatgtccaccttttggcagta 527
           ||||||||||| ||||||||| ||||||||||||||||| |||||||
Sbjct: 561 aatgcttctcaccccattatgaccgccatgtccacctttcggcagta 515
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>dbj|AK099894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113G18, full
           insert sequence
          Length = 1249

 Score =  323 bits (163), Expect = 3e-85
 Identities = 256/287 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 tcatctattcagcatttcggatgattgggcggtgttcacgaaagtagcgctcttgttgaa 300
           ||||||||||| |||||| || || || |||||||||||  |||| ||||||||||||||
Sbjct: 806 tcatctattcaacatttcagaggactgtgcggtgttcacataagttgcgctcttgttgaa 747

                                                                       
Query: 301 tccttcaagtgtcattattcttattgcatccaagcccctatggaatgtgaaatcaagctc 360
           ||| ||||||| ||||||||| | ||| ||||||||||||||||| | ||||||||||||
Sbjct: 746 tccctcaagtgccattattctaactgcctccaagcccctatggaaagcgaaatcaagctc 687

                                                                       
Query: 361 ttcttgttcttttttggtgaatggcctgagaacaaagttggcaggatccatcttcccagg 420
           ||| ||||||||| || | ||||| | ||||||||| |||||||||||||||||||||||
Sbjct: 686 ttcctgttcttttctgttaaatggtcggagaacaaaattggcaggatccatcttcccagg 627

                                                                       
Query: 421 tggtcgtccaatgccaattcttagacgtggaaaatcacgattttgtttgagatggttgat 480
           |||||||||||||||||||||||||||||| |||||||| || || || | |||||||||
Sbjct: 626 tggtcgtccaatgccaattcttagacgtgggaaatcacggttctgcttcaaatggttgat 567

                                                          
Query: 481 aatgcttctcatcccattatgcccgccatgtccaccttttggcagta 527
           ||||||||||| ||||||||| ||||||||||||||||| |||||||
Sbjct: 566 aatgcttctcaccccattatgaccgccatgtccacctttcggcagta 520
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>dbj|AK066034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047M19, full
           insert sequence
          Length = 1211

 Score =  315 bits (159), Expect = 8e-83
 Identities = 255/287 (88%)
 Strand = Plus / Minus

                                                                       
Query: 241 tcatctattcagcatttcggatgattgggcggtgttcacgaaagtagcgctcttgttgaa 300
           ||||||||||| |||||| || || || |||||||||||  |||| ||||||||||||||
Sbjct: 830 tcatctattcaacatttcagaggactgtgcggtgttcacataagttgcgctcttgttgaa 771

                                                                       
Query: 301 tccttcaagtgtcattattcttattgcatccaagcccctatggaatgtgaaatcaagctc 360
           |||  |||||| ||||||||| | ||| ||||||||||||||||| | ||||||||||||
Sbjct: 770 tcccacaagtgccattattctaactgcctccaagcccctatggaaagcgaaatcaagctc 711

                                                                       
Query: 361 ttcttgttcttttttggtgaatggcctgagaacaaagttggcaggatccatcttcccagg 420
           ||| ||||||||| || | ||||| | ||||||||| |||||||||||||||||||||||
Sbjct: 710 ttcctgttcttttctgttaaatggtcggagaacaaaattggcaggatccatcttcccagg 651

                                                                       
Query: 421 tggtcgtccaatgccaattcttagacgtggaaaatcacgattttgtttgagatggttgat 480
           |||||||||||||||||||||||||||||| |||||||| || || || | |||||||||
Sbjct: 650 tggtcgtccaatgccaattcttagacgtgggaaatcacggttctgcttcaaatggttgat 591

                                                          
Query: 481 aatgcttctcatcccattatgcccgccatgtccaccttttggcagta 527
           ||||||||||| ||||||||| ||||||||||||||||| |||||||
Sbjct: 590 aatgcttctcaccccattatgaccgccatgtccacctttcggcagta 544
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>ref|XM_475848.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 708

 Score =  159 bits (80), Expect = 1e-35
 Identities = 212/256 (82%)
 Strand = Plus / Minus

                                                                       
Query: 272 gtgttcacgaaagtagcgctcttgttgaatccttcaagtgtcattattcttattgcatcc 331
           |||||||| ||||| || | ||||||||||||||| |||  |||||| |||| ||| | |
Sbjct: 677 gtgttcacaaaagttgcacccttgttgaatccttcgagtagcattatccttactgcttgc 618

                                                                       
Query: 332 aagcccctatggaatgtgaaatcaagctcttcttgttcttttttggtgaatggcctgaga 391
           |||| ||||| ||  || |||| |||||||||||||||||  |||||||||| ||| |||
Sbjct: 617 aagctcctattgatcgtcaaattaagctcttcttgttcttccttggtgaatgaccttaga 558

                                                                       
Query: 392 acaaagttggcaggatccatcttcccaggtggtcgtccaatgccaattcttagacgtgga 451
           ||||||  |  || ||||| ||||||||  || || ||||| ||||| || || ||||| 
Sbjct: 557 acaaagccgatagcatccaacttcccagtggggcgcccaataccaatcctaaggcgtggg 498

                                                                       
Query: 452 aaatcacgattttgtttgagatggttgataatgcttctcatcccattatgcccgccatgt 511
           ||||||||  | ||||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 497 aaatcacggctctgtttcaaatggttaataatgcttctcatcccattatgcccgccatgt 438

                           
Query: 512 ccaccttttggcagta 527
           || ||||| |||||||
Sbjct: 437 cctcctttaggcagta 422
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>dbj|AK061016.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B10, full
           insert sequence
          Length = 1074

 Score =  159 bits (80), Expect = 1e-35
 Identities = 212/256 (82%)
 Strand = Plus / Minus

                                                                       
Query: 272 gtgttcacgaaagtagcgctcttgttgaatccttcaagtgtcattattcttattgcatcc 331
           |||||||| ||||| || | ||||||||||||||| |||  |||||| |||| ||| | |
Sbjct: 765 gtgttcacaaaagttgcacccttgttgaatccttcgagtagcattatccttactgcttgc 706

                                                                       
Query: 332 aagcccctatggaatgtgaaatcaagctcttcttgttcttttttggtgaatggcctgaga 391
           |||| ||||| ||  || |||| |||||||||||||||||  |||||||||| ||| |||
Sbjct: 705 aagctcctattgatcgtcaaattaagctcttcttgttcttccttggtgaatgaccttaga 646

                                                                       
Query: 392 acaaagttggcaggatccatcttcccaggtggtcgtccaatgccaattcttagacgtgga 451
           ||||||  |  || ||||| ||||||||  || || ||||| ||||| || || ||||| 
Sbjct: 645 acaaagccgatagcatccaacttcccagtggggcgcccaataccaatcctaaggcgtggg 586

                                                                       
Query: 452 aaatcacgattttgtttgagatggttgataatgcttctcatcccattatgcccgccatgt 511
           ||||||||  | ||||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 585 aaatcacggctctgtttcaaatggttaataatgcttctcatcccattatgcccgccatgt 526

                           
Query: 512 ccaccttttggcagta 527
           || ||||| |||||||
Sbjct: 525 cctcctttaggcagta 510
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>gb|AY110197.1| Zea mays CL41614_1 mRNA sequence
          Length = 531

 Score =  157 bits (79), Expect = 4e-35
 Identities = 127/143 (88%)
 Strand = Plus / Plus

                                                                       
Query: 383 ggcctgagaacaaagttggcaggatccatcttcccaggtggtcgtccaatgccaattctt 442
           |||| |||||| || |||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 306 ggccggagaacgaaattggcaggatccatcttcccgggcggtcgtccaatgccaattctt 365

                                                                       
Query: 443 agacgtggaaaatcacgattttgtttgagatggttgataatgcttctcatcccattatgc 502
           || ||||||||||||||  | ||||| | ||||||||  |||||||||||||||||||||
Sbjct: 366 aggcgtggaaaatcacggctctgtttcaaatggttgacgatgcttctcatcccattatgc 425

                                  
Query: 503 ccgccatgtccaccttttggcag 525
           || ||||| ||||| ||||||||
Sbjct: 426 ccaccatggccaccctttggcag 448



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                       
Query: 245 ctattcagcatttcggatgattgggcggtgttcacgaaagtagcgctcttgttgaatcct 304
           |||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||
Sbjct: 168 ctattcagcatttcagatgattgggcagtgttcacgtaagtcgcgctcttgttgaatcct 227

             
Query: 305 tc 306
           ||
Sbjct: 228 tc 229
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  117 bits (59), Expect = 4e-23
 Identities = 104/119 (87%)
 Strand = Plus / Plus

                                                                            
Query: 241      tcatctattcagcatttcggatgattgggcggtgttcacgaaagtagcgctcttgttgaa 300
                ||||||||||| |||||| || || || |||||||||||  |||| ||||||||||||||
Sbjct: 28651303 tcatctattcaacatttcagaggactgtgcggtgttcacataagttgcgctcttgttgaa 28651362

                                                                           
Query: 301      tccttcaagtgtcattattcttattgcatccaagcccctatggaatgtgaaatcaagct 359
                ||| ||||||| ||||||||| | ||| ||||||||||||||||| | |||||||||||
Sbjct: 28651363 tccctcaagtgccattattctaactgcctccaagcccctatggaaagcgaaatcaagct 28651421



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                            
Query: 358      ctcttcttgttcttttttggtgaatggcctgagaacaaagttggcaggatccatcttccc 417
                |||||| ||||||||| || | ||||| | ||||||||| ||||||||||||||||||||
Sbjct: 28651528 ctcttcctgttcttttctgttaaatggtcggagaacaaaattggcaggatccatcttccc 28651587

                                  
Query: 418      aggtggtcgtccaatgcc 435
                ||||||||||||||||||
Sbjct: 28651588 aggtggtcgtccaatgcc 28651605



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                          
Query: 434      ccaattcttagacgtggaaaatcacgattttgtttgagatggttgataatgcttctca 491
                ||||||||||||||||| |||||||| || || || | ||||||||||||||||||||
Sbjct: 28651674 ccaattcttagacgtgggaaatcacggttctgcttcaaatggttgataatgcttctca 28651731



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 493      cccattatgcccgccatgtccaccttttggcagta 527
                ||||||||| ||||||||||||||||| |||||||
Sbjct: 28652237 cccattatgaccgccatgtccacctttcggcagta 28652271
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>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431H09
          Length = 166886

 Score =  117 bits (59), Expect = 4e-23
 Identities = 104/119 (87%)
 Strand = Plus / Plus

                                                                         
Query: 241   tcatctattcagcatttcggatgattgggcggtgttcacgaaagtagcgctcttgttgaa 300
             ||||||||||| |||||| || || || |||||||||||  |||| ||||||||||||||
Sbjct: 34377 tcatctattcaacatttcagaggactgtgcggtgttcacataagttgcgctcttgttgaa 34436

                                                                        
Query: 301   tccttcaagtgtcattattcttattgcatccaagcccctatggaatgtgaaatcaagct 359
             ||| ||||||| ||||||||| | ||| ||||||||||||||||| | |||||||||||
Sbjct: 34437 tccctcaagtgccattattctaactgcctccaagcccctatggaaagcgaaatcaagct 34495



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                         
Query: 358   ctcttcttgttcttttttggtgaatggcctgagaacaaagttggcaggatccatcttccc 417
             |||||| ||||||||| || | ||||| | ||||||||| ||||||||||||||||||||
Sbjct: 34602 ctcttcctgttcttttctgttaaatggtcggagaacaaaattggcaggatccatcttccc 34661

                               
Query: 418   aggtggtcgtccaatgcc 435
             ||||||||||||||||||
Sbjct: 34662 aggtggtcgtccaatgcc 34679



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                       
Query: 434   ccaattcttagacgtggaaaatcacgattttgtttgagatggttgataatgcttctca 491
             ||||||||||||||||| |||||||| || || || | ||||||||||||||||||||
Sbjct: 34748 ccaattcttagacgtgggaaatcacggttctgcttcaaatggttgataatgcttctca 34805



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 493   cccattatgcccgccatgtccaccttttggcagta 527
             ||||||||| ||||||||||||||||| |||||||
Sbjct: 35311 cccattatgaccgccatgtccacctttcggcagta 35345
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>ref|NM_101701.2| Arabidopsis thaliana aminoacyl-tRNA hydrolase AT1G18440 mRNA,
           complete cds
          Length = 1109

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 gagaacaaagttggcaggatccatcttcccaggtggtcgtccaatgccaattcttagacg 447
           ||||||||| ||||| | |||||||||||| || || ||||| || || |||||||| ||
Sbjct: 741 gagaacaaaattggctgtatccatcttccctggaggacgtccgatccctattcttagtcg 682

                                                                       
Query: 448 tggaaaatcacgattttgtttgagatggttgataatgcttctcatcccattatgcccgcc 507
            |||||||||||  |   ||||||  |||  ||||| |||||||||||||| || || ||
Sbjct: 681 aggaaaatcacggctacctttgaggcggtctataatacttctcatcccattgtggcctcc 622

                            
Query: 508 atgtccaccttttggca 524
            || |||||||||||||
Sbjct: 621 gtgaccaccttttggca 605
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>emb|BX813553.1|CNS0AAJW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB24ZA09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1387

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Minus

                                                                        
Query: 388  gagaacaaagttggcaggatccatcttcccaggtggtcgtccaatgccaattcttagacg 447
            ||||||||| ||||| | |||||||||||| || || ||||| || || |||||||| ||
Sbjct: 1107 gagaacaaaattggctgtatccatcttccctggaggacgtccgatccctattcttagtcg 1048

                                                                        
Query: 448  tggaaaatcacgattttgtttgagatggttgataatgcttctcatcccattatgcccgcc 507
             |||||||||||  |   ||||||  |||  ||||| |||||||||||||| || || ||
Sbjct: 1047 aggaaaatcacggctacctttgaggcggtctataatacttctcatcccattgtggcctcc 988

                             
Query: 508  atgtccaccttttggca 524
             || |||||||||||||
Sbjct: 987  gtgaccaccttttggca 971
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>gb|BT005284.1| Arabidopsis thaliana At1g18440 mRNA, complete cds
          Length = 867

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 gagaacaaagttggcaggatccatcttcccaggtggtcgtccaatgccaattcttagacg 447
           ||||||||| ||||| | |||||||||||| || || ||||| || || |||||||| ||
Sbjct: 723 gagaacaaaattggctgtatccatcttccctggaggacgtccgatccctattcttagtcg 664

                                                                       
Query: 448 tggaaaatcacgattttgtttgagatggttgataatgcttctcatcccattatgcccgcc 507
            |||||||||||  |   ||||||  |||  ||||| |||||||||||||| || || ||
Sbjct: 663 aggaaaatcacggctacctttgaggcggtctataatacttctcatcccattgtggcctcc 604

                            
Query: 508 atgtccaccttttggca 524
            || |||||||||||||
Sbjct: 603 gtgaccaccttttggca 587
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>dbj|AK119054.1| Arabidopsis thaliana At1g18440 mRNA for unknown protein, complete
           cds, clone: RAFL21-39-I07
          Length = 1109

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 gagaacaaagttggcaggatccatcttcccaggtggtcgtccaatgccaattcttagacg 447
           ||||||||| ||||| | |||||||||||| || || ||||| || || |||||||| ||
Sbjct: 741 gagaacaaaattggctgtatccatcttccctggaggacgtccgatccctattcttagtcg 682

                                                                       
Query: 448 tggaaaatcacgattttgtttgagatggttgataatgcttctcatcccattatgcccgcc 507
            |||||||||||  |   ||||||  |||  ||||| |||||||||||||| || || ||
Sbjct: 681 aggaaaatcacggctacctttgaggcggtctataatacttctcatcccattgtggcctcc 622

                            
Query: 508 atgtccaccttttggca 524
            || |||||||||||||
Sbjct: 621 gtgaccaccttttggca 605
to top
>gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete sequence
          Length = 122694

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 402   caggatccatcttcccaggtggtcgtccaatgcc 435
             ||||||||||||||||||| ||||||||||||||
Sbjct: 79303 caggatccatcttcccaggaggtcgtccaatgcc 79336
to top
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
             complete sequence
          Length = 141715

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 493   cccattatgcccgccatgtccaccttttggcagta 527
             ||||||||||||||||||||| ||||| |||||||
Sbjct: 74912 cccattatgcccgccatgtcctcctttaggcagta 74878



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 358   ctcttcttgttcttttttggtgaatggcctgagaacaaag 397
             ||||||||||||||  |||||||||| ||| |||||||||
Sbjct: 75583 ctcttcttgttcttccttggtgaatgaccttagaacaaag 75544



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                         
Query: 272   gtgttcacgaaagtagcgctcttgttgaatccttcaagtgtcattattcttattgcatcc 331
             |||||||| ||||| || | ||||||||||||||| |||  |||||| |||| ||| | |
Sbjct: 75839 gtgttcacaaaagttgcacccttgttgaatccttcgagtagcattatccttactgcttgc 75780

                       
Query: 332   aagcccctat 341
             |||| |||||
Sbjct: 75779 aagctcctat 75770



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 446   cgtggaaaatcacgattttgtttgagatggttgataatgcttctcatcc 494
             ||||| ||||||||  | ||||| | |||||| ||||||||||||||||
Sbjct: 75422 cgtgggaaatcacggctctgtttcaaatggttaataatgcttctcatcc 75374
to top
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
             complete sequence
          Length = 166218

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 493   cccattatgcccgccatgtccaccttttggcagta 527
             ||||||||||||||||||||| ||||| |||||||
Sbjct: 99414 cccattatgcccgccatgtcctcctttaggcagta 99380



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 358    ctcttcttgttcttttttggtgaatggcctgagaacaaag 397
              ||||||||||||||  |||||||||| ||| |||||||||
Sbjct: 100086 ctcttcttgttcttccttggtgaatgaccttagaacaaag 100047



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                          
Query: 272    gtgttcacgaaagtagcgctcttgttgaatccttcaagtgtcattattcttattgcatcc 331
              |||||||| ||||| || | ||||||||||||||| |||  |||||| |||| ||| | |
Sbjct: 100342 gtgttcacaaaagttgcacccttgttgaatccttcgagtagcattatccttactgcttgc 100283

                        
Query: 332    aagcccctat 341
              |||| |||||
Sbjct: 100282 aagctcctat 100273



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 446   cgtggaaaatcacgattttgtttgagatggttgataatgcttctcatcc 494
             ||||| ||||||||  | ||||| | |||||| ||||||||||||||||
Sbjct: 99925 cgtgggaaatcacggctctgtttcaaatggttaataatgcttctcatcc 99877
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 493      cccattatgcccgccatgtccaccttttggcagta 527
                ||||||||||||||||||||| ||||| |||||||
Sbjct: 27068330 cccattatgcccgccatgtcctcctttaggcagta 27068296



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 358      ctcttcttgttcttttttggtgaatggcctgagaacaaag 397
                ||||||||||||||  |||||||||| ||| |||||||||
Sbjct: 27069002 ctcttcttgttcttccttggtgaatgaccttagaacaaag 27068963



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                            
Query: 272      gtgttcacgaaagtagcgctcttgttgaatccttcaagtgtcattattcttattgcatcc 331
                |||||||| ||||| || | ||||||||||||||| |||  |||||| |||| ||| | |
Sbjct: 27069258 gtgttcacaaaagttgcacccttgttgaatccttcgagtagcattatccttactgcttgc 27069199

                          
Query: 332      aagcccctat 341
                |||| |||||
Sbjct: 27069198 aagctcctat 27069189



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 446      cgtggaaaatcacgattttgtttgagatggttgataatgcttctcatcc 494
                ||||| ||||||||  | ||||| | |||||| ||||||||||||||||
Sbjct: 27068841 cgtgggaaatcacggctctgtttcaaatggttaataatgcttctcatcc 27068793
to top
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
           complete sequence
          Length = 177861

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 358 ctcttcttgttcttttttggtgaatggcctgagaacaaag 397
           ||||||||||||||  |||||||||| ||| |||||||||
Sbjct: 398 ctcttcttgttcttccttggtgaatgaccttagaacaaag 359



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                       
Query: 272 gtgttcacgaaagtagcgctcttgttgaatccttcaagtgtcattattcttattgcatcc 331
           |||||||| ||||| || | ||||||||||||||| |||  |||||| |||| ||| | |
Sbjct: 654 gtgttcacaaaagttgcacccttgttgaatccttcgagtagcattatccttactgcttgc 595

                     
Query: 332 aagcccctat 341
           |||| |||||
Sbjct: 594 aagctcctat 585



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 446 cgtggaaaatcacgattttgtttgagatggttgataatgcttctcatcc 494
           ||||| ||||||||  | ||||| | |||||| ||||||||||||||||
Sbjct: 237 cgtgggaaatcacggctctgtttcaaatggttaataatgcttctcatcc 189
to top
>gb|AC106033.4| Homo sapiens chromosome 18, clone CTD-2025K11, complete sequence
          Length = 95930

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 38    tcacattgctggtataaataaaa 60
             |||||||||||||||||||||||
Sbjct: 51016 tcacattgctggtataaataaaa 51038
to top
>gb|AC152123.1| Genomic sequence for broccoli [Brassica oleracea L. (Italica group)]
             BAC clone B21F5, complete sequence
          Length = 82329

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 493   cccattatgcccgccatgtccaccttttggcagta 527
             |||||| ||||| ||||| ||||||||||||||||
Sbjct: 39236 cccattgtgccccccatggccaccttttggcagta 39202
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 359  tcttcttgttcttttttggtga 380
            ||||||||||||||||||||||
Sbjct: 4968 tcttcttgttcttttttggtga 4947
to top
>gb|AC149372.1| Phakopsora pachyrhizi clone JGIAFNA-5A1, complete sequence
          Length = 31316

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 95    taaagctttggttttcagtgtgggg 119
             |||||||||||||||||| ||||||
Sbjct: 22675 taaagctttggttttcagggtgggg 22699
to top
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence
          Length = 200595

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 142    cacaatgcaaataactgaaaa 162
              |||||||||||||||||||||
Sbjct: 109845 cacaatgcaaataactgaaaa 109865
to top
>gb|AE004290.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section
           198 of 251 of the complete chromosome
          Length = 10581

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 493 cccattatgcccgccatgtcc 513
           |||||||||||||||||||||
Sbjct: 468 cccattatgcccgccatgtcc 448
to top
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 219    aaaaaatgaatcaattggttt 239
              |||||||||||||||||||||
Sbjct: 923019 aaaaaatgaatcaattggttt 922999
to top
>gb|AC016957.49| Homo sapiens 12 BAC RP11-50I19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 50743

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 142   cacaatgcaaataactgaaaa 162
             |||||||||||||||||||||
Sbjct: 11437 cacaatgcaaataactgaaaa 11417
to top
>emb|AL928988.14| Mouse DNA sequence from clone RP23-402M7 on chromosome 2, complete
             sequence
          Length = 121977

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     ctcaaatgctatggcatccat 23
             |||||||||||||||||||||
Sbjct: 98775 ctcaaatgctatggcatccat 98795
to top
>gb|AC131678.4| Mus musculus BAC clone RP23-333L1 from chromosome 3, complete
            sequence
          Length = 203750

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   ataaataaaattattatcac 70
            ||||||||||||||||||||
Sbjct: 3520 ataaataaaattattatcac 3539
to top
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 150     aaataactgaaaacccctat 169
               ||||||||||||||||||||
Sbjct: 1467396 aaataactgaaaacccctat 1467415
to top
>gb|AC139579.3| Mus musculus BAC clone RP23-139E6 from chromosome 7, complete sequence
          Length = 194033

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     ttgctggtataaataaaatt 62
              ||||||||||||||||||||
Sbjct: 156132 ttgctggtataaataaaatt 156113
to top
>ref|XM_445293.1| Candida glabrata CBS138, CAGL0C02673g partial mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 340  atggaatgtgaaatcaagct 359
            ||||||||||||||||||||
Sbjct: 1234 atggaatgtgaaatcaagct 1253
to top
>gb|AC132252.2| Mus musculus BAC clone RP24-450A24 from chromosome 15, complete sequence
          Length = 180985

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 474    ggttgataatgcttctcatcccat 497
              ||||||||||||| ||||||||||
Sbjct: 156032 ggttgataatgctgctcatcccat 156055
to top
>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete
            sequence
          Length = 186986

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 402  caggatccatcttcccaggt 421
            ||||||||||||||||||||
Sbjct: 3654 caggatccatcttcccaggt 3635
to top
>ref|XM_764518.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_26_29020_31941)
            partial mRNA
          Length = 2922

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  tggccacaatgcaaataact 157
            ||||||||||||||||||||
Sbjct: 2857 tggccacaatgcaaataact 2838
to top
>ref|XM_764519.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_26_31944_31735) partial mRNA
          Length = 210

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 138 tggccacaatgcaaataact 157
           ||||||||||||||||||||
Sbjct: 69  tggccacaatgcaaataact 88
to top
>gb|AC101827.10| Mus musculus chromosome 15, clone RP24-426P14, complete sequence
          Length = 125196

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 474   ggttgataatgcttctcatcccat 497
             ||||||||||||| ||||||||||
Sbjct: 41946 ggttgataatgctgctcatcccat 41923
to top
>gb|AC160063.12| Mus musculus 10 BAC RP24-502H14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 158603

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    agctcttcttgttctttttt 375
              ||||||||||||||||||||
Sbjct: 138759 agctcttcttgttctttttt 138778
to top
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     aataaaattattatcaccca 73
              ||||||||||||||||||||
Sbjct: 196146 aataaaattattatcaccca 196127
to top
>emb|AL596092.8| Human DNA sequence from clone RP11-351N4 on chromosome 13 Contains part
             of a novel gene (KIAA0774), a glyceraldehyde-3-phosphate
             dehydrogenase (GAPD) pseudogene, a novel gene and a CpG
             island, complete sequence
          Length = 153841

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 356   agctcttcttgttcttttttggtg 379
             ||||||||||||||||| ||||||
Sbjct: 84289 agctcttcttgttctttcttggtg 84312
to top
>gb|AC010282.6| Homo sapiens chromosome 5 clone CTC-555I19, complete sequence
          Length = 191131

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 303    cttcaagtgtcattattcttattg 326
              |||||||| |||||||||||||||
Sbjct: 104262 cttcaagtttcattattcttattg 104285
to top
>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome
          Length = 119704

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    ctggtataaataaaattatt 65
             ||||||||||||||||||||
Sbjct: 58156 ctggtataaataaaattatt 58175
to top
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 220     aaaaatgaatcaattggttt 239
               ||||||||||||||||||||
Sbjct: 3897359 aaaaatgaatcaattggttt 3897340
to top
>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence
          Length = 558804

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    atggaatgtgaaatcaagct 359
              ||||||||||||||||||||
Sbjct: 273243 atggaatgtgaaatcaagct 273262
to top
>emb|AL935261.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 10/11
          Length = 298050

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 447   gtggaaaatcacgattttgtttga 470
             ||||||||||| ||||||||||||
Sbjct: 50741 gtggaaaatcatgattttgtttga 50718
to top
>gb|AY189120.1| Mus musculus nebulin (Neb) gene, complete sequence
          Length = 202402

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   ttcttttttggtgaatggcc 386
             ||||||||||||||||||||
Sbjct: 84873 ttcttttttggtgaatggcc 84892
to top
>emb|CR352228.11| Zebrafish DNA sequence from clone CH211-104F13 in linkage group 23,
              complete sequence
          Length = 175139

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     tataaataaaattattatca 69
              ||||||||||||||||||||
Sbjct: 115375 tataaataaaattattatca 115356
to top
>emb|BX547993.5| Zebrafish DNA sequence from clone CH211-282E16 in linkage group 19,
             complete sequence
          Length = 108908

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   aagctcttcttgttcttttt 374
             ||||||||||||||||||||
Sbjct: 56623 aagctcttcttgttcttttt 56642
to top
>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147895

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   atgcaaataactgaaaaccc 165
             ||||||||||||||||||||
Sbjct: 73302 atgcaaataactgaaaaccc 73283
to top
>gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, complete sequence
          Length = 150962

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    tgtcatctattcagcatttc 258
              ||||||||||||||||||||
Sbjct: 132268 tgtcatctattcagcatttc 132287
to top
>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome
          Length = 641454

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     tataaataaaattattatca 69
              ||||||||||||||||||||
Sbjct: 450088 tataaataaaattattatca 450069
to top
>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 361     ttcttgttcttttttggtga 380
               ||||||||||||||||||||
Sbjct: 1121201 ttcttgttcttttttggtga 1121182
to top
>gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete sequence
          Length = 190066

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   tcttcttgttcttttttggt 378
             ||||||||||||||||||||
Sbjct: 50478 tcttcttgttcttttttggt 50497
to top
>gb|AC102367.35| Mus musculus chromosome 3, clone RP23-211J6, complete sequence
          Length = 185452

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    ataaataaaattattatcac 70
             ||||||||||||||||||||
Sbjct: 85274 ataaataaaattattatcac 85255
to top
>dbj|AB073156.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC
             clone:F13F19
          Length = 97397

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 77    ttgtcgtatatgcacaaataaagctttg 104
             ||||||||||||||||||| ||| ||||
Sbjct: 47697 ttgtcgtatatgcacaaattaagttttg 47724
to top
>gb|AC160060.20| Mus musculus 10 BAC RP23-360L4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 229681

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    agctcttcttgttctttttt 375
              ||||||||||||||||||||
Sbjct: 199129 agctcttcttgttctttttt 199110
to top
>emb|AL844571.8| Mouse DNA sequence from clone RP23-224C23 on chromosome 2, complete
              sequence
          Length = 182273

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    ttcttttttggtgaatggcc 386
              ||||||||||||||||||||
Sbjct: 174428 ttcttttttggtgaatggcc 174409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,582,582
Number of Sequences: 3902068
Number of extensions: 6582582
Number of successful extensions: 150000
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 149644
Number of HSP's gapped (non-prelim): 354
length of query: 527
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 504
effective length of database: 17,143,297,704
effective search space: 8640222042816
effective search space used: 8640222042816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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