Clone Name | rbart54d01 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|BT024007.1| Zea mays clone EL01N0403A09 mRNA sequence | 42 | 0.72 | 2 | ref|XM_725353.1| Plasmodium yoelii yoelii str. 17XNL multidrug r... | 40 | 2.8 |
---|
>gb|BT024007.1| Zea mays clone EL01N0403A09 mRNA sequence Length = 1758 Score = 42.1 bits (21), Expect = 0.72 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 tcagcacataacttatacaaa 142 ||||||||||||||||||||| Sbjct: 584 tcagcacataacttatacaaa 564
>ref|XM_725353.1| Plasmodium yoelii yoelii str. 17XNL multidrug resistance protein (PY00245) partial mRNA Length = 4266 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tgcaacatctatgaagaatt 169 |||||||||||||||||||| Sbjct: 3618 tgcaacatctatgaagaatt 3637 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,750,098 Number of Sequences: 3902068 Number of extensions: 1750098 Number of successful extensions: 113832 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113830 Number of HSP's gapped (non-prelim): 2 length of query: 222 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 200 effective length of database: 17,147,199,772 effective search space: 3429439954400 effective search space used: 3429439954400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)