>CARA_HELPY (O25835) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase glutamine chain)
          Length = 375

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 25/93 (26%), Positives = 41/93 (44%)
 Frame = -3

Query: 305 PLVNFCAGRLLISYAQGKWQPRVSKHFFHSIQIFVVFGVPTGTERKSQH*FLFRDPHDIK 126
           P++  C G  L+S AQG   P     F H      V  + T     +     +  P DI+
Sbjct: 263 PMLGICLGHQLLSIAQG--YPTYKLKFGHHGSNHPVKNLKTNAVEITAQNHNYCVPEDIE 320

Query: 125 GQISVCTLHRDDRRNILDGL*NKFITVFSFLYH 27
            +I++ T HR+   N ++G+  K   + S  +H
Sbjct: 321 -EIAIIT-HRNLFDNTIEGVRYKNAPIISVQHH 351

>YKW2_YEAST (P35995) Putative 82.2 kDa transcriptional regulatory protein in|
           FRE2 5'region
          Length = 705

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
 Frame = +1

Query: 100 CRVQTLIC----PFM-SCGSRNRNQC 162
           CRV+ L C    PF  SC SRNR QC
Sbjct: 27  CRVRKLKCDRVRPFCGSCSSRNRKQC 52

>GUAA_WOLPM (Q73IH1) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 520

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 22/106 (20%), Positives = 40/106 (37%)
 Frame = -3

Query: 386 PSSYYSGQLDPDRVIQDSVVPEDSVS*PLVNFCAGRLLISYAQGKWQPRVSKHFFHSIQI 207
           P S      +  RV+ + +   ++ S P++  C G+ LI +  G       K  F   +I
Sbjct: 52  PQSVNDDCSETSRVVHEIIKLNEATSVPILGICYGQQLICHYFGAKVKESFKQEFGRTKI 111

Query: 206 FVVFGVPTGTERKSQH*FLFRDPHDIKGQISVCTLHRDDRRNILDG 69
            ++   P           + +D  D+  ++ V   H D    I  G
Sbjct: 112 KILKESP-----------IVKDTWDVNSEVDVLMNHADSVDTIPQG 146


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,218,674
Number of Sequences: 219361
Number of extensions: 965110
Number of successful extensions: 1604
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1604
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)