ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart54c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
2emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4,... 94 4e-16
3gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence 94 4e-16
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 94 4e-16
5dbj|AK068928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
6ref|XM_474188.1| Oryza sativa (japonica cultivar-group), predic... 60 6e-06
7gb|BT016450.1| Zea mays clone Contig283 mRNA sequence 48 0.021
8gb|AY104413.1| Zea mays PCO098503 mRNA sequence 48 0.021
9gb|AC122298.3| Mus musculus BAC clone RP23-269A11 from 12, compl... 46 0.084
10gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, com... 44 0.33
11gb|AC162896.3| Mus musculus chromosome 5, clone RP24-318J14, com... 44 0.33
12gb|AY663401.1| Pan troglodytes voucher Coriell Cell Repository D... 44 0.33
13gb|AC003090.1| Homo sapiens BAC clone CTA-241I2 from 7, complete... 44 0.33
14emb|AL592065.7| Mouse DNA sequence from clone RP23-50E4 on chrom... 44 0.33
15gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex B... 44 0.33
16gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex B... 44 0.33
17gb|AC134572.4| Mus musculus BAC clone RP23-435M15 from chromosom... 42 1.3
18gb|AC123923.2| Mus musculus BAC clone RP24-228I17 from chromosom... 42 1.3
19gb|CP000001.1| Bacillus cereus E33L, complete genome 42 1.3
20gb|AC022025.8| Homo sapiens chromosome 10 clone RP11-489D8, comp... 42 1.3
21gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, com... 42 1.3
22gb|AC009560.10| Homo sapiens chromosome 15, clone RP11-219B17, c... 42 1.3
23gb|AC105630.4| Rattus norvegicus X BAC CH230-131N20 (Children's ... 42 1.3
24gb|AC113761.6| Rattus norvegicus X BAC CH230-91H16 (Children's H... 42 1.3
25gb|AC108718.13| Homo sapiens 3 BAC RP11-246A10 (Roswell Park Can... 42 1.3
26gb|AC068535.7| Homo sapiens BAC clone RP11-120M14 from 2, comple... 42 1.3
27gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 42 1.3
28gb|AC102383.7| Mus musculus chromosome 1, clone RP24-312K8, comp... 42 1.3
29gb|AY107483.1| Zea mays PCO113991 mRNA sequence 42 1.3
30gb|AC102370.13| Mus musculus chromosome 3, clone RP23-256D7, com... 42 1.3
31emb|AL627446.12| Mouse DNA sequence from clone RP23-211F22 on ch... 42 1.3
32ref|NM_128631.2| Arabidopsis thaliana unknown protein AT2G30780 ... 40 5.2
33gb|BC074628.1| Xenopus tropicalis keratin, mRNA (cDNA clone MGC:... 40 5.2
34gb|AC121821.3| Mus musculus chromosome 18 clone RP23-461O23, com... 40 5.2
35gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, comp... 40 5.2
36gb|AF111103.1|MMHC322F16 Mouse major histocompatibility complex ... 40 5.2
37gb|AY333900.1| Cotesia bignellii from France NADH dehydrogenase ... 40 5.2
38gb|AY333898.1| Cotesia acuminata from China NADH dehydrogenase s... 40 5.2
39gb|AC146106.3| Pan troglodytes BAC clone RP43-5I17 from 7, compl... 40 5.2
40gb|BC096005.1| Xenopus tropicalis hypothetical protein LOC613046... 40 5.2
41gb|AY663414.1| Homo sapiens voucher Coriell Cell Repository DNA ... 40 5.2
42gb|AY663411.1| Homo sapiens voucher Coriell Cell Repository DNA ... 40 5.2
43gb|AY663409.1| Homo sapiens voucher Coriell Cell Repository DNA ... 40 5.2
44gb|AY663406.1| Homo sapiens voucher Coriell Cell Repository DNA ... 40 5.2
45gb|AY663400.1| Homo sapiens voucher Coriell Cell Repository DNA ... 40 5.2
46gb|AY663395.1| Homo sapiens voucher Coriell Cell Repository DNA ... 40 5.2
47gb|AY558503.1| Saccharomyces cerevisiae clone FLH002826.01X YGL1... 40 5.2
48gb|AC073273.9| Homo sapiens BAC clone RP11-643A21 from 7, comple... 40 5.2
49gb|AC006006.2| Homo sapiens PAC clone RP4-813F11 from 7, complet... 40 5.2
50gb|AC107454.12| Mus musculus chromosome 3, clone RP23-339P23, co... 40 5.2
51gb|AC122251.4| Mus musculus BAC clone RP23-167J15 from chromosom... 40 5.2
52gb|AC117234.4| Mus musculus BAC clone RP23-410J2 from chromosome... 40 5.2
53emb|Z75540.1|CEF37D6 Caenorhabditis elegans Cosmid F37D6, comple... 40 5.2
54ref|XM_645490.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 5.2
55ref|XM_652038.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 5.2
56ref|XM_738825.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.2
57ref|XM_673075.1| Plasmodium berghei strain ANKA hypothetical pro... 40 5.2
58gb|AC164642.3| Mus musculus BAC clone RP23-248L4 from chromosome... 40 5.2
59gb|AC093562.3| Homo sapiens chromosome 1 clone RP11-553F10, comp... 40 5.2
60gb|AC144799.3| Mus musculus chromosome 18 clone RP24-299J7, comp... 40 5.2
61emb|AL662789.11| Human DNA sequence from clone XXbac-254F23 on c... 40 5.2
62emb|AL607150.10| Human DNA sequence from clone RP11-531F24 on ch... 40 5.2
63emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chro... 40 5.2
64emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on ch... 40 5.2
65emb|AL354919.16| Human DNA sequence from clone RP11-84A19 on chr... 40 5.2
66emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on ch... 40 5.2
67gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome... 40 5.2
68emb|AL035658.7|HS85F18 Human DNA sequence from clone RP1-85F18 o... 40 5.2
69emb|Z48618.1|SCCHVII35 S.cerevisiae genes for RAD54, ACE1(CUP2),... 40 5.2
70ref|NM_001006686.1| Xenopus tropicalis keratin (krt), mRNA 40 5.2
71emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in... 40 5.2
72gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig co... 40 5.2
73gb|AC099677.2| Homo sapiens chromosome 1 clone RP4-631H13, compl... 40 5.2
74gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complet... 40 5.2
75gb|AC095033.2| Homo sapiens chromosome 1 clone RP11-313A24, comp... 40 5.2
76gb|AC130805.15| Medicago truncatula clone mth2-9n1, complete seq... 40 5.2
77gb|AC012469.10| Homo sapiens chromosome 10 clone RP11-216P13, co... 40 5.2
78gb|AC002340.3| Arabidopsis thaliana chromosome 2 BAC T11J7 genom... 40 5.2
79gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, comple... 40 5.2
80gb|AC015804.14| Homo sapiens chromosome 17, clone RP11-637C24, c... 40 5.2
81gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, comp... 40 5.2
82gb|AC092802.2| Homo sapiens chromosome 1 clone RP11-57H12, compl... 40 5.2
83gb|AC008654.5|AC008654 Homo sapiens chromosome 5 clone CTB-191B1... 40 5.2
84gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5... 40 5.2
85gb|AC156550.5| Mus musculus chromosome 15, clone RP23-353K7, com... 40 5.2
86dbj|AB199027.1| Lemur catta Leca-T2R4 gene for bitter taste rece... 40 5.2
87gb|AC093767.2| Homo sapiens BAC clone RP11-107E21 from 4, comple... 40 5.2
88gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromoso... 40 5.2
89gb|AC152506.2| Pan troglodytes BAC clone RP43-4B9 from chromosom... 40 5.2
90gb|AC087216.1|AC087216 Mus musculus strain 129svj chromosome 17 ... 40 5.2
91gb|AC015979.4|AC015979 Homo sapiens BAC clone RP11-538M13 from Y... 40 5.2
92gb|AC116910.11| Homo sapiens chromosome 17, clone CTD-2573C9, co... 40 5.2
93gb|AC084211.19| Homo sapiens 3 BAC RP11-338L18 (Roswell Park Can... 40 5.2
94gb|AC177793.1| Pan troglodytes chromosome X clone CH251-542N20 m... 40 5.2
95gb|AC009511.16|AC009511 Homo sapiens 12 BAC RP11-860B13 (Roswell... 40 5.2
96gb|AC111173.10| Homo sapiens chromosome 17, clone RP11-148L19, c... 40 5.2
97emb|BX322656.11| Mouse DNA sequence from clone RP23-146D13 on ch... 40 5.2
98gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxyge... 40 5.2
99emb|Z72675.1|SCYGL153W S.cerevisiae chromosome VII reading frame... 40 5.2
100emb|CR760223.2| Xenopus tropicalis finished cDNA, clone TNeu065l03 40 5.2
101dbj|AK112954.1| Ciona intestinalis cDNA, clone:cicl007o01, full ... 40 5.2
102emb|AL672162.6| Mouse DNA sequence from clone RP23-100C4 on chro... 40 5.2
103gb|AC134614.4| Mus musculus BAC clone RP23-148D12 from 14, compl... 40 5.2
104emb|CR974473.23| Mouse DNA sequence from clone RP23-38P5 on chro... 40 5.2
105emb|CT485755.1| Xenopus tropicalis finished cDNA, clone TNeu112g02 40 5.2 
>dbj|AK071255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086C22, full
            insert sequence
          Length = 1660

 Score =  137 bits (69), Expect = 3e-29
 Identities = 161/189 (85%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                        
Query: 196  aaaacaacaaagatttgaatagaatggaagaaatgttttgacactcgtggctgcc-attt 254
            ||||||||||||||||||||||||||||| ||| |||||||||||| | | |||| || |
Sbjct: 1367 aaaacaacaaagatttgaatagaatggaataaacgttttgacactccttgttgccaatgt 1308

                                                                        
Query: 255  cccttgtgcatatgatattaatagtctacctgcacagaagttgactaagggctagctgac 314
            ||||| ||||||||||| |||||||||||||| ||| |  |  ||||||| |||||||| 
Sbjct: 1307 cccttatgcatatgata-taatagtctacctggacaaatatccactaaggactagctgat 1249

                                                                        
Query: 315  agaatcctccggaacaactgaatcctgaataacacgatctgggtccaattgaccactgta 374
             || |||||||| |||  ||||||||||| ||||||||| || ||||  |||||||||||
Sbjct: 1248 tgagtcctccgggacacttgaatcctgaagaacacgatcaggatccagctgaccactgta 1189

                     
Query: 375  ataactaga 383
            ||| |||||
Sbjct: 1188 atagctaga 1180
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>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23,
             complete sequence
          Length = 149353

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 82/91 (90%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                         
Query: 196   aaaacaacaaagatttgaatagaatggaagaaatgttttgacactcgtggctgcc-attt 254
             ||||||||||||||||||||||||||||| ||| |||||||||||| | | |||| || |
Sbjct: 28233 aaaacaacaaagatttgaatagaatggaataaacgttttgacactccttgttgccaatgt 28174

                                            
Query: 255   cccttgtgcatatgatattaatagtctacct 285
             ||||| ||||||||||| |||||||||||||
Sbjct: 28173 cccttatgcatatgata-taatagtctacct 28144



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 298   actaagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctggg 357
             ||||||| ||||||||  || |||||||| |||  ||||||||||| ||||||||| || 
Sbjct: 27051 actaaggactagctgattgagtcctccgggacacttgaatcctgaagaacacgatcagga 26992

                                       
Query: 358   tccaattgaccactgtaataactaga 383
             ||||  |||||||||||||| |||||
Sbjct: 26991 tccagctgaccactgtaatagctaga 26966
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>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence
          Length = 181577

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 82/91 (90%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                         
Query: 196   aaaacaacaaagatttgaatagaatggaagaaatgttttgacactcgtggctgcc-attt 254
             ||||||||||||||||||||||||||||| ||| |||||||||||| | | |||| || |
Sbjct: 28427 aaaacaacaaagatttgaatagaatggaataaacgttttgacactccttgttgccaatgt 28368

                                            
Query: 255   cccttgtgcatatgatattaatagtctacct 285
             ||||| ||||||||||| |||||||||||||
Sbjct: 28367 cccttatgcatatgata-taatagtctacct 28338



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 298   actaagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctggg 357
             ||||||| ||||||||  || |||||||| |||  ||||||||||| ||||||||| || 
Sbjct: 27245 actaaggactagctgattgagtcctccgggacacttgaatcctgaagaacacgatcagga 27186

                                       
Query: 358   tccaattgaccactgtaataactaga 383
             ||||  |||||||||||||| |||||
Sbjct: 27185 tccagctgaccactgtaatagctaga 27160
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 82/91 (90%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                            
Query: 196      aaaacaacaaagatttgaatagaatggaagaaatgttttgacactcgtggctgcc-attt 254
                ||||||||||||||||||||||||||||| ||| |||||||||||| | | |||| || |
Sbjct: 33597173 aaaacaacaaagatttgaatagaatggaataaacgttttgacactccttgttgccaatgt 33597114

                                               
Query: 255      cccttgtgcatatgatattaatagtctacct 285
                ||||| ||||||||||| |||||||||||||
Sbjct: 33597113 cccttatgcatatgata-taatagtctacct 33597084



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                            
Query: 298      actaagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctggg 357
                ||||||| ||||||||  || |||||||| |||  ||||||||||| ||||||||| || 
Sbjct: 33595991 actaaggactagctgattgagtcctccgggacacttgaatcctgaagaacacgatcagga 33595932

                                          
Query: 358      tccaattgaccactgtaataactaga 383
                ||||  |||||||||||||| |||||
Sbjct: 33595931 tccagctgaccactgtaatagctaga 33595906
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>dbj|AK068928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170O13, full
            insert sequence
          Length = 3699

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 82/91 (90%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 196  aaaacaacaaagatttgaatagaatggaagaaatgttttgacactcgtggctgcc-attt 254
            ||||||||||||||||||||||||||||| ||| |||||||||||| | | |||| || |
Sbjct: 3102 aaaacaacaaagatttgaatagaatggaataaacgttttgacactccttgttgccaatgt 3043

                                           
Query: 255  cccttgtgcatatgatattaatagtctacct 285
            ||||| ||||||||||| |||||||||||||
Sbjct: 3042 cccttatgcatatgata-taatagtctacct 3013



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                        
Query: 298  actaagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctggg 357
            ||||||| ||||||||  || |||||||| |||  ||||||||||| ||||||||| || 
Sbjct: 1920 actaaggactagctgattgagtcctccgggacacttgaatcctgaagaacacgatcagga 1861

                                      
Query: 358  tccaattgaccactgtaataactaga 383
            ||||  |||||||||||||| |||||
Sbjct: 1860 tccagctgaccactgtaatagctaga 1835
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>ref|XM_474188.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1035

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 306  ctagctgacagaatcctccggaacaactgaatcctgaataacacgatctgggtccaattg 365
            ||||||||  || |||||||| |||  ||||||||||| ||||||||| || ||||  ||
Sbjct: 1035 ctagctgattgagtcctccgggacacttgaatcctgaagaacacgatcaggatccagctg 976

                              
Query: 366  accactgtaataactaga 383
            |||||||||||| |||||
Sbjct: 975  accactgtaatagctaga 958
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>gb|BT016450.1| Zea mays clone Contig283 mRNA sequence
          Length = 1470

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                        
Query: 300  taagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctgggtc 359
            ||||| ||||||||  || |||||||| |||   ||||||||||| ||||| || |||||
Sbjct: 1126 taaggactagctgatggagtcctccgggacagtggaatcctgaatcacacggtcagggtc 1067

                                    
Query: 360  caattgaccactgtaataactaga 383
             |  |||||||||||||| |||||
Sbjct: 1066 tagctgaccactgtaatagctaga 1043



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  aaaacaacaaagatttgaatagaatggaagaaa 228
            |||||| | |||||||||| |||||||||||||
Sbjct: 1229 aaaacaccgaagatttgaacagaatggaagaaa 1197
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>gb|AY104413.1| Zea mays PCO098503 mRNA sequence
          Length = 1571

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                        
Query: 300  taagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctgggtc 359
            ||||| ||||||||  || |||||||| |||   ||||||||||| ||||| || |||||
Sbjct: 1274 taaggactagctgatggagtcctccgggacagtggaatcctgaatcacacggtcagggtc 1215

                                    
Query: 360  caattgaccactgtaataactaga 383
             |  |||||||||||||| |||||
Sbjct: 1214 tagctgaccactgtaatagctaga 1191



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 196  aaaacaacaaagatttgaatagaatggaagaaa 228
            |||||| | |||||||||| |||||||||||||
Sbjct: 1377 aaaacaccgaagatttgaacagaatggaagaaa 1345
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>gb|AC122298.3| Mus musculus BAC clone RP23-269A11 from 12, complete sequence
          Length = 151332

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 15     gaataaaagaaagtgataaagaaaagaaaat 45
              ||||||||||||| ||||||||| |||||||
Sbjct: 102939 gaataaaagaaagagataaagaagagaaaat 102969
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>gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, complete sequence
          Length = 198469

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 32   aaagaaaagaaaatacagttataaat 57
            ||||||||||||||||||||| ||||
Sbjct: 6622 aaagaaaagaaaatacagttacaaat 6597
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>gb|AC162896.3| Mus musculus chromosome 5, clone RP24-318J14, complete sequence
          Length = 180319

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 32    aaagaaaagaaaatacagttataaat 57
             ||||||||||||||||||||| ||||
Sbjct: 73556 aaagaaaagaaaatacagttacaaat 73531
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>gb|AY663401.1| Pan troglodytes voucher Coriell Cell Repository DNA sample NS03646 MHC
             class II antigen (HLA-DQB1), MHC class II antigen
             (HLA-DQA1), and MHC class II antigen (HLA-DRB1) genes,
             complete cds
          Length = 111437

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 21    aagaaagtgataaagaaaagaaaatacagttata 54
             |||||| | ||||||||||||||||||| |||||
Sbjct: 61949 aagaaaataataaagaaaagaaaatacatttata 61916
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>gb|AC003090.1| Homo sapiens BAC clone CTA-241I2 from 7, complete sequence
          Length = 94255

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 32    aaagaaaagaaaatacagttat 53
             ||||||||||||||||||||||
Sbjct: 18821 aaagaaaagaaaatacagttat 18800
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>emb|AL592065.7| Mouse DNA sequence from clone RP23-50E4 on chromosome 11 Contains the 3'
              end of a novel gene, two novel genes, the 5' end of the
              Brip1 gene for BRCA1 interacting protein C-terminal
              helicase 1 and a mitochondrial F0 complex H+ transporting
              ATP synthase subunit g (Atp5l) pseudogene, complete
              sequence
          Length = 200624

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 32     aaagaaaagaaaatacagttat 53
              ||||||||||||||||||||||
Sbjct: 126356 aaagaaaagaaaatacagttat 126335
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>gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex BAC MMU012K22, complete
              sequence
          Length = 174897

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 19     aaaagaaagtgataaagaaaagaaaataca 48
              |||||||| | |||||||||||||||||||
Sbjct: 166783 aaaagaaaataataaagaaaagaaaataca 166812
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>gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007H18, complete
              sequence
          Length = 215614

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 19     aaaagaaagtgataaagaaaagaaaataca 48
              |||||||| | |||||||||||||||||||
Sbjct: 118131 aaaagaaaataataaagaaaagaaaataca 118160
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>gb|AC134572.4| Mus musculus BAC clone RP23-435M15 from chromosome 3, complete sequence
          Length = 202037

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 42    aaatacagttataaatttattttac 66
             ||||||| |||||||||||||||||
Sbjct: 37442 aaatacacttataaatttattttac 37466
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>gb|AC123923.2| Mus musculus BAC clone RP24-228I17 from chromosome 1, complete sequence
          Length = 163182

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    agtgataaagaaaagaaaata 46
             |||||||||||||||||||||
Sbjct: 66425 agtgataaagaaaagaaaata 66445
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 20     aaagaaagtgataaagaaaagaaaa 44
              ||||||| |||||||||||||||||
Sbjct: 875042 aaagaaaatgataaagaaaagaaaa 875066
to top
>gb|AC022025.8| Homo sapiens chromosome 10 clone RP11-489D8, complete sequence
          Length = 189762

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 24    aaagtgataaagaaaagaaaatacagtta 52
             ||||| ||||||||||||||||| |||||
Sbjct: 45344 aaagtcataaagaaaagaaaatatagtta 45372
to top
>gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, complete sequence
          Length = 170255

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 24  aaagtgataaagaaaagaaaatacagtta 52
           ||||| ||||||||||||||||| |||||
Sbjct: 987 aaagtcataaagaaaagaaaatatagtta 959
to top
>gb|AC009560.10| Homo sapiens chromosome 15, clone RP11-219B17, complete sequence
          Length = 177308

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    aaagaaaagaaaatacagtta 52
             |||||||||||||||||||||
Sbjct: 73196 aaagaaaagaaaatacagtta 73176
to top
>gb|AC105630.4| Rattus norvegicus X BAC CH230-131N20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 86901

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 151   agaaatcaatgttgagatttt 171
             |||||||||||||||||||||
Sbjct: 54755 agaaatcaatgttgagatttt 54735
to top
>gb|AC113761.6| Rattus norvegicus X BAC CH230-91H16 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 232930

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 151   agaaatcaatgttgagatttt 171
             |||||||||||||||||||||
Sbjct: 69324 agaaatcaatgttgagatttt 69344
to top
>gb|AC108718.13| Homo sapiens 3 BAC RP11-246A10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 66513

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 214   atagaatggaagaaatgtttt 234
             |||||||||||||||||||||
Sbjct: 56627 atagaatggaagaaatgtttt 56607
to top
>gb|AC068535.7| Homo sapiens BAC clone RP11-120M14 from 2, complete sequence
          Length = 176703

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 35     gaaaagaaaatacagttataaattt 59
              |||||||||||||| ||||||||||
Sbjct: 148153 gaaaagaaaatacacttataaattt 148129
to top
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 21      aagaaagtgataaagaaaagaaaat 45
               |||||||| ||||||||||||||||
Sbjct: 2719183 aagaaagttataaagaaaagaaaat 2719159
to top
>gb|AC102383.7| Mus musculus chromosome 1, clone RP24-312K8, complete sequence
          Length = 142805

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 25     aagtgataaagaaaagaaaat 45
              |||||||||||||||||||||
Sbjct: 114654 aagtgataaagaaaagaaaat 114634
to top
>gb|AY107483.1| Zea mays PCO113991 mRNA sequence
          Length = 804

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 20  aaagaaagtgataaagaaaagaaaa 44
           |||||||| ||||||||||||||||
Sbjct: 633 aaagaaagagataaagaaaagaaaa 609
to top
>gb|AC102370.13| Mus musculus chromosome 3, clone RP23-256D7, complete sequence
          Length = 191171

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 42     aaatacagttataaatttattttac 66
              ||||||| |||||||||||||||||
Sbjct: 170075 aaatacacttataaatttattttac 170099
to top
>emb|AL627446.12| Mouse DNA sequence from clone RP23-211F22 on chromosome 4, complete
             sequence
          Length = 103091

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    tgataaagaaaagaaaataca 48
             |||||||||||||||||||||
Sbjct: 74732 tgataaagaaaagaaaataca 74712
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>ref|NM_128631.2| Arabidopsis thaliana unknown protein AT2G30780 mRNA, complete cds
          Length = 1432

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 atttgaatagaatggaagaaatgt 231
           |||||||||| |||||||||||||
Sbjct: 849 atttgaataggatggaagaaatgt 872
to top
>gb|BC074628.1| Xenopus tropicalis keratin, mRNA (cDNA clone MGC:69554
           IMAGE:5378980), complete cds
          Length = 1583

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 tgttgagattttcgctctgt 179
           ||||||||||||||||||||
Sbjct: 821 tgttgagattttcgctctgt 802
to top
>gb|AC121821.3| Mus musculus chromosome 18 clone RP23-461O23, complete sequence
          Length = 175131

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 18    taaaagaaagtgataaagaaaagaaaat 45
             |||||||||||||| | |||||||||||
Sbjct: 64692 taaaagaaagtgattatgaaaagaaaat 64665
to top
>gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, complete sequence
          Length = 194413

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     aaagaaaagaaaatacagtt 51
              ||||||||||||||||||||
Sbjct: 102525 aaagaaaagaaaatacagtt 102506
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>gb|AF111103.1|MMHC322F16 Mouse major histocompatibility complex region containing the Q region of
              class I
          Length = 159179

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      catctgggaataaaagaaag 27
              ||||||||||||||||||||
Sbjct: 135471 catctgggaataaaagaaag 135452
to top
>gb|AY333900.1| Cotesia bignellii from France NADH dehydrogenase subunit 1 (ND1)
           gene, partial cds; mitochondrial
          Length = 655

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 aaagatttgaatagaatgga 223
           ||||||||||||||||||||
Sbjct: 131 aaagatttgaatagaatgga 112
to top
>gb|AY333898.1| Cotesia acuminata from China NADH dehydrogenase subunit 1 (ND1)
           gene, partial cds; mitochondrial
          Length = 640

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 aaagatttgaatagaatgga 223
           ||||||||||||||||||||
Sbjct: 122 aaagatttgaatagaatgga 103
to top
>gb|AC146106.3| Pan troglodytes BAC clone RP43-5I17 from 7, complete sequence
          Length = 221821

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaagaaaagaaaatacagtt 51
             ||||||||||||||||||||
Sbjct: 49778 aaagaaaagaaaatacagtt 49759
to top
>gb|BC096005.1| Xenopus tropicalis hypothetical protein LOC613046, mRNA (cDNA clone
            IMAGE:7003650), partial cds
          Length = 2505

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   ataaagaaaagaaaatacag 49
            ||||||||||||||||||||
Sbjct: 1952 ataaagaaaagaaaatacag 1971
to top
>gb|AY663414.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA03715 MHC
             class II antigen (HLA-DQB1) gene and MHC class II antigen
             (HLA-DQA1) gene, HLA-DQA1-DQA1*0103 allele, complete cds;
             and MHC class II antigen (HLA-DRB1) gene, partial cds
          Length = 118048

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 21    aagaaagtgataaagaaaagaaaataca 48
             |||||| | |||||||||||||||||||
Sbjct: 86268 aagaaaataataaagaaaagaaaataca 86241
to top
>gb|AY663411.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14663 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602
             allele, MHC class II antigen (HLA-DQA1) gene,
             HLA-DQA1-DQA1*010201 allele, and MHC class II antigen
             (HLA-DRB1) gene, complete cds
          Length = 99966

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 21    aagaaagtgataaagaaaagaaaataca 48
             |||||| | |||||||||||||||||||
Sbjct: 57230 aagaaaataataaagaaaagaaaataca 57203
to top
>gb|AY663409.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA04535 MHC
             class II antigen (HLA-DQB1) gene and MHC class II antigen
             (HLA-DQA1) gene, HLA-DQA1-DQA1*0505 allele, complete cds;
             and MHC class II antigen (HLA-DRB1) gene, partial cds
          Length = 77506

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 21    aagaaagtgataaagaaaagaaaataca 48
             |||||| | |||||||||||||||||||
Sbjct: 51279 aagaaaataataaagaaaagaaaataca 51252
to top
>gb|AY663406.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10923 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602
             allele, MHC class II antigen (HLA-DQA1) gene,
             HLA-DQA1-DQA1*010201 allele, and MHC class II antigen
             (HLA-DRB1) gene, HLA-DRB1-DRB1*150101 allele, complete cds
          Length = 103395

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 21    aagaaagtgataaagaaaagaaaataca 48
             |||||| | |||||||||||||||||||
Sbjct: 68205 aagaaaataataaagaaaagaaaataca 68178
to top
>gb|AY663400.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01018 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*050101
             allele, MHC class II antigen (HLA-DQA1) gene,
             HLA-DQA1-DQA1*010102 allele, and MHC class II antigen
             (HLA-DRB1) gene, complete cds
          Length = 143390

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 21    aagaaagtgataaagaaaagaaaataca 48
             |||||| | |||||||||||||||||||
Sbjct: 88196 aagaaaataataaagaaaagaaaataca 88169
to top
>gb|AY663395.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14660 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602
             allele, MHC class II antigen (HLA-DQA1) gene,
             HLA-DQA1-DQA1*010201 allele, and MHC class II antigen
             (HLA-DRB1) gene, complete cds
          Length = 104996

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 21    aagaaagtgataaagaaaagaaaataca 48
             |||||| | |||||||||||||||||||
Sbjct: 57089 aagaaaataataaagaaaagaaaataca 57062
to top
>gb|AY558503.1| Saccharomyces cerevisiae clone FLH002826.01X YGL153W gene, complete
           cds
          Length = 1026

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  aagaaagtgataaagaaaag 40
           ||||||||||||||||||||
Sbjct: 833 aagaaagtgataaagaaaag 852
to top
>gb|AC073273.9| Homo sapiens BAC clone RP11-643A21 from 7, complete sequence
          Length = 152884

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     aaagaaaagaaaatacagtt 51
              ||||||||||||||||||||
Sbjct: 130607 aaagaaaagaaaatacagtt 130588
to top
>gb|AC006006.2| Homo sapiens PAC clone RP4-813F11 from 7, complete sequence
          Length = 136385

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   aacaactgaatcctgaataa 346
             ||||||||||||||||||||
Sbjct: 49822 aacaactgaatcctgaataa 49841
to top
>gb|AC107454.12| Mus musculus chromosome 3, clone RP23-339P23, complete sequence
          Length = 199324

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaagaaaagaaaatacagtt 51
             ||||||||||||||||||||
Sbjct: 11646 aaagaaaagaaaatacagtt 11627
to top
>gb|AC122251.4| Mus musculus BAC clone RP23-167J15 from chromosome 14, complete sequence
          Length = 204588

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 17     ataaaagaaagtgataaagaaaagaaaa 44
              ||||||||||| || |||||||||||||
Sbjct: 173802 ataaaagaaagagaaaaagaaaagaaaa 173829
to top
>gb|AC117234.4| Mus musculus BAC clone RP23-410J2 from chromosome 6, complete sequence
          Length = 193027

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 16     aataaaagaaagtgataaagaaaa 39
              ||||||||||||||| ||||||||
Sbjct: 155762 aataaaagaaagtgaaaaagaaaa 155785
to top
>emb|Z75540.1|CEF37D6 Caenorhabditis elegans Cosmid F37D6, complete sequence
          Length = 29363

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   tgaatagaatggaagaaatg 230
             ||||||||||||||||||||
Sbjct: 12937 tgaatagaatggaagaaatg 12918
to top
>ref|XM_645490.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (210.t00011)
            partial mRNA
          Length = 3432

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 20   aaagaaagtgataaagaaaagaaa 43
            |||||| |||||||||||||||||
Sbjct: 3304 aaagaaggtgataaagaaaagaaa 3327
to top
>ref|XM_652038.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (4.t00085)
            partial mRNA
          Length = 2685

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 16   aataaaagaaagtgataaagaaaa 39
            ||||||||||| ||||||||||||
Sbjct: 1995 aataaaagaaactgataaagaaaa 2018
to top
>ref|XM_738825.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000214.04.0)
           partial mRNA
          Length = 1137

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  ttataaatttattttacaac 69
           ||||||||||||||||||||
Sbjct: 240 ttataaatttattttacaac 259
to top
>ref|XM_673075.1| Plasmodium berghei strain ANKA hypothetical protein (PB001518.02.0)
           partial mRNA
          Length = 3375

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  ttataaatttattttacaac 69
           ||||||||||||||||||||
Sbjct: 174 ttataaatttattttacaac 193
to top
>gb|AC164642.3| Mus musculus BAC clone RP23-248L4 from chromosome 6, complete sequence
          Length = 212166

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     aaagaaaatacagttataaa 56
              ||||||||||||||||||||
Sbjct: 160422 aaagaaaatacagttataaa 160403
to top
>gb|AC093562.3| Homo sapiens chromosome 1 clone RP11-553F10, complete sequence
          Length = 205171

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    taaatttattttacaaccca 72
             ||||||||||||||||||||
Sbjct: 76380 taaatttattttacaaccca 76361
to top
>gb|AC144799.3| Mus musculus chromosome 18 clone RP24-299J7, complete sequence
          Length = 192272

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 18    taaaagaaagtgataaagaaaagaaaat 45
             |||||||||||||| | |||||||||||
Sbjct: 34887 taaaagaaagtgattatgaaaagaaaat 34914
to top
>emb|AL662789.11| Human DNA sequence from clone XXbac-254F23 on chromosome 6 contains the
             5' end of the HLA-DRB1 gene for major histocompatibility
             complex, class II, DR beta 1, the HLA-DQA1 gene for major
             histocompatibility complex, class II, DQ alpha 1, the
             HLA-DQB1 gene for major histocompatibility complex, class
             II, DQ beta 1, a cytochrome C oxidase polypeptide III
             pseudogene, a major histocompatibility complex, class II,
             beta polypeptide pseudogene and two CpG islands, complete
             sequence
          Length = 147557

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 21    aagaaagtgataaagaaaagaaaataca 48
             |||||| | |||||||||||||||||||
Sbjct: 24332 aagaaaataataaagaaaagaaaataca 24359
to top
>emb|AL607150.10| Human DNA sequence from clone RP11-531F24 on chromosome 10 Contains a
             novel gene (FLJ39352), complete sequence
          Length = 96268

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaagaaaagaaaatacagtt 51
             ||||||||||||||||||||
Sbjct: 85352 aaagaaaagaaaatacagtt 85333
to top
>emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chromosome 1, complete
             sequence
          Length = 189385

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   aaacagaaatcaatgttgagattt 170
             |||||||||||||| |||||||||
Sbjct: 41642 aaacagaaatcaatattgagattt 41665
to top
>emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on chromosome 1, complete
             sequence
          Length = 191686

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    aaaatacagttataaatttatttt 64
             |||||||| |||||||||||||||
Sbjct: 75527 aaaatacatttataaatttatttt 75550
to top
>emb|AL354919.16| Human DNA sequence from clone RP11-84A19 on chromosome 1 Contains the
             5' end of the BAI2 gene for brain-specific angiogenesis
             inhibitor 2, the gene for a novel protein (FLJ33697,
             FLJ25348, FLJ39908, FLJ25348, FLJ38510, FLJ38873), a novel
             gene (FLJ46627) and three CpG islands, complete sequence
          Length = 124413

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    aaagaaaatacagttataaa 56
             ||||||||||||||||||||
Sbjct: 58270 aaagaaaatacagttataaa 58289
to top
>emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on chromosome 9p13.1-13.3
             Contains the 3' end of a novel gene, a protein associated
             with PRK1 (AWP1) pseudogene, a novel gene  (KIAA0375), a
             ribosomal protein L36a (L44L, RPL44) (RPL36A) pseudogene, 
             a novel gene, a ribosomal protein S29 (RPS29) pseudogene
             and a CpG island, complete sequence
          Length = 153826

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    ataaagaaaagaaaatacagttat 53
             ||||||||||||||||| ||||||
Sbjct: 38623 ataaagaaaagaaaatagagttat 38646
to top
>gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome 6, complete sequence
          Length = 212096

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     aaagaaaatacagttataaa 56
              ||||||||||||||||||||
Sbjct: 202232 aaagaaaatacagttataaa 202251
to top
>emb|AL035658.7|HS85F18 Human DNA sequence from clone RP1-85F18 on chromosome 22q13.31-13.33,
             complete sequence
          Length = 41917

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    aaaagaaaatacagttataaattt 59
             ||||||||||| ||||||||||||
Sbjct: 21585 aaaagaaaatatagttataaattt 21608
to top
>emb|Z48618.1|SCCHVII35 S.cerevisiae genes for RAD54, ACE1(CUP2), PMR1, RCK1, AMS1, DNA
             helicase and tRNA-Leu
          Length = 35364

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aagaaagtgataaagaaaag 40
             ||||||||||||||||||||
Sbjct: 26415 aagaaagtgataaagaaaag 26434
to top
>ref|NM_001006686.1| Xenopus tropicalis keratin (krt), mRNA
          Length = 1583

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 tgttgagattttcgctctgt 179
           ||||||||||||||||||||
Sbjct: 821 tgttgagattttcgctctgt 802
to top
>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete
              sequence
          Length = 219065

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     aagtgataaagaaaagaaaa 44
              ||||||||||||||||||||
Sbjct: 163675 aagtgataaagaaaagaaaa 163656
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>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox
             cluster, cholinesterase, and COLP5alpha genes, complete
             sequence
          Length = 796348

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   gaaacagaaatcaatgttgagatt 169
             ||||||||||| ||||||||||||
Sbjct: 13979 gaaacagaaattaatgttgagatt 14002
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>gb|AC099677.2| Homo sapiens chromosome 1 clone RP4-631H13, complete sequence
          Length = 116236

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    aaagaaagtgataaagaaaa 39
             ||||||||||||||||||||
Sbjct: 24253 aaagaaagtgataaagaaaa 24234
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>gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complete sequence
          Length = 189479

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 21     aagaaagtgataaagaaaagaaaatacagtta 52
              |||||| | |||||||| ||||||||||||||
Sbjct: 176518 aagaaaatcataaagaagagaaaatacagtta 176487
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>gb|AC095033.2| Homo sapiens chromosome 1 clone RP11-313A24, complete sequence
          Length = 157332

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 19     aaaagaaagtgataaagaaaagaaaata 46
              |||||||| | |||||||||||||||||
Sbjct: 145039 aaaagaaaatcataaagaaaagaaaata 145012
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>gb|AC130805.15| Medicago truncatula clone mth2-9n1, complete sequence
          Length = 139054

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   gaaatcaatgttgagatttt 171
             ||||||||||||||||||||
Sbjct: 74803 gaaatcaatgttgagatttt 74784
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>gb|AC012469.10| Homo sapiens chromosome 10 clone RP11-216P13, complete sequence
          Length = 170367

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    agaaaagaaaatacagttat 53
             ||||||||||||||||||||
Sbjct: 75682 agaaaagaaaatacagttat 75701
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>gb|AC002340.3| Arabidopsis thaliana chromosome 2 BAC T11J7 genomic sequence, complete
             sequence
          Length = 79574

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 208   atttgaatagaatggaagaaatgt 231
             |||||||||| |||||||||||||
Sbjct: 71358 atttgaataggatggaagaaatgt 71381
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>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence
          Length = 184520

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    agtgataaagaaaagaaaat 45
             ||||||||||||||||||||
Sbjct: 91288 agtgataaagaaaagaaaat 91307
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>gb|AC015804.14| Homo sapiens chromosome 17, clone RP11-637C24, complete sequence
          Length = 200452

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     ttataaatttattttacaac 69
              ||||||||||||||||||||
Sbjct: 183531 ttataaatttattttacaac 183550
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>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence
          Length = 214702

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaagaaaagaaaatacagtt 51
             ||||||||||||||||||||
Sbjct: 78210 aaagaaaagaaaatacagtt 78191
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>gb|AC092802.2| Homo sapiens chromosome 1 clone RP11-57H12, complete sequence
          Length = 163331

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 19    aaaagaaagtgataaagaaaagaaaata 46
             |||||||| | |||||||||||||||||
Sbjct: 60610 aaaagaaaatcataaagaaaagaaaata 60583
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>gb|AC008654.5|AC008654 Homo sapiens chromosome 5 clone CTB-191B18, complete sequence
          Length = 63760

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 21   aagaaagtgataaagaaaagaaaatacagtta 52
            |||||| | |||||||| ||||||||||||||
Sbjct: 6119 aagaaaatcataaagaagagaaaatacagtta 6088
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>gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5, complete sequence
          Length = 193960

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 21    aagaaagtgataaagaaaagaaaatacagtta 52
             |||||| | |||||||| ||||||||||||||
Sbjct: 50930 aagaaaatcataaagaagagaaaatacagtta 50899
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>gb|AC156550.5| Mus musculus chromosome 15, clone RP23-353K7, complete sequence
          Length = 205302

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 54     aaatttattttacaacccatctaa 77
              ||||||||||||||| ||||||||
Sbjct: 123473 aaatttattttacaatccatctaa 123496
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>dbj|AB199027.1| Lemur catta Leca-T2R4 gene for bitter taste receptor T2R4, partial
           cds
          Length = 875

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 361 aattgaccactgtaataactagac 384
           |||||||||||||||||| |||||
Sbjct: 92  aattgaccactgtaataaatagac 69
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>gb|AC093767.2| Homo sapiens BAC clone RP11-107E21 from 4, complete sequence
          Length = 149505

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     aaagaaaagaaaatacagtt 51
              ||||||||||||||||||||
Sbjct: 120098 aaagaaaagaaaatacagtt 120117
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>gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromosome 7, complete
             sequence
          Length = 196949

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    gaaaagaaaatacagttataaatt 58
             |||||||||||| |||||||||||
Sbjct: 88486 gaaaagaaaataaagttataaatt 88463
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>gb|AC152506.2| Pan troglodytes BAC clone RP43-4B9 from chromosome 7, complete sequence
          Length = 181146

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaagaaaagaaaatacagtt 51
             ||||||||||||||||||||
Sbjct: 12782 aaagaaaagaaaatacagtt 12763
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>gb|AC087216.1|AC087216 Mus musculus strain 129svj chromosome 17 clone GS1-11M9, complete
              sequence
          Length = 226594

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      catctgggaataaaagaaag 27
              ||||||||||||||||||||
Sbjct: 180728 catctgggaataaaagaaag 180709
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>gb|AC015979.4|AC015979 Homo sapiens BAC clone RP11-538M13 from Y, complete sequence
          Length = 22212

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaagaaaagaaaatacagtt 51
             ||||||||||||||||||||
Sbjct: 21295 aaagaaaagaaaatacagtt 21276
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>gb|AC116910.11| Homo sapiens chromosome 17, clone CTD-2573C9, complete sequence
          Length = 149156

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 16   aataaaagaaagtgataaagaaaagaaaatac 47
            |||||||||||  || ||||||||||||||||
Sbjct: 8863 aataaaagaaacagaaaaagaaaagaaaatac 8894
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>gb|AC084211.19| Homo sapiens 3 BAC RP11-338L18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154026

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     aaagtgataaagaaaagaaa 43
              ||||||||||||||||||||
Sbjct: 113256 aaagtgataaagaaaagaaa 113275
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>gb|AC177793.1| Pan troglodytes chromosome X clone CH251-542N20 map human ortholog
             p11.4, complete sequence
          Length = 167413

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   agaatggaagaaatgttttg 235
             ||||||||||||||||||||
Sbjct: 67649 agaatggaagaaatgttttg 67668
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>gb|AC009511.16|AC009511 Homo sapiens 12 BAC RP11-860B13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 60385

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   tgaatagaatggaagaaatg 230
             ||||||||||||||||||||
Sbjct: 17262 tgaatagaatggaagaaatg 17243
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>gb|AC111173.10| Homo sapiens chromosome 17, clone RP11-148L19, complete sequence
          Length = 27994

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 16    aataaaagaaagtgataaagaaaagaaaatac 47
             |||||||||||  || ||||||||||||||||
Sbjct: 16300 aataaaagaaacagaaaaagaaaagaaaatac 16269
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>emb|BX322656.11| Mouse DNA sequence from clone RP23-146D13 on chromosome X, complete
              sequence
          Length = 199567

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 20     aaagaaagtgataaagaaaagaaa 43
              |||||||| |||||||||||||||
Sbjct: 100712 aaagaaagagataaagaaaagaaa 100689
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>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3),
              anthocyanin biosynthesis regulatory protein Pl1_B73
              (Z576C20.4), putative growth-regulating factor 1
              (Z576C20.6), and putative aminoalcoholphosphotransferase
              (Z576C20.14) genes, complete cds; and putative receptor
              protein kinase (Z576C20.21) gene, partial cds
          Length = 155173

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 136    tgtggatcccgaaacagaaatcaa 159
              |||||||| |||||||||||||||
Sbjct: 108838 tgtggatctcgaaacagaaatcaa 108861
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>emb|Z72675.1|SCYGL153W S.cerevisiae chromosome VII reading frame ORF YGL153w
          Length = 1427

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   aagaaagtgataaagaaaag 40
            ||||||||||||||||||||
Sbjct: 1009 aagaaagtgataaagaaaag 1028
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>emb|CR760223.2| Xenopus tropicalis finished cDNA, clone TNeu065l03
          Length = 1562

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 tgttgagattttcgctctgt 179
           ||||||||||||||||||||
Sbjct: 808 tgttgagattttcgctctgt 789
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>dbj|AK112954.1| Ciona intestinalis cDNA, clone:cicl007o01, full insert sequence
          Length = 1130

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 aacaaagatttgaatagaat 220
           ||||||||||||||||||||
Sbjct: 811 aacaaagatttgaatagaat 830
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>emb|AL672162.6| Mouse DNA sequence from clone RP23-100C4 on chromosome 2, complete
              sequence
          Length = 136483

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     atacagttataaatttattt 63
              ||||||||||||||||||||
Sbjct: 103119 atacagttataaatttattt 103100
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>gb|AC134614.4| Mus musculus BAC clone RP23-148D12 from 14, complete sequence
          Length = 209278

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 17    ataaaagaaagtgataaagaaaagaaaa 44
             ||||||||||| || |||||||||||||
Sbjct: 21397 ataaaagaaagagaaaaagaaaagaaaa 21424
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>emb|CR974473.23| Mouse DNA sequence from clone RP23-38P5 on chromosome 17, complete
              sequence
          Length = 219471

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      catctgggaataaaagaaag 27
              ||||||||||||||||||||
Sbjct: 134543 catctgggaataaaagaaag 134524
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>emb|CT485755.1| Xenopus tropicalis finished cDNA, clone TNeu112g02
          Length = 1563

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 tgttgagattttcgctctgt 179
           ||||||||||||||||||||
Sbjct: 811 tgttgagattttcgctctgt 792


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,508,182
Number of Sequences: 3902068
Number of extensions: 5508182
Number of successful extensions: 141873
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141459
Number of HSP's gapped (non-prelim): 407
length of query: 388
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 366
effective length of database: 17,147,199,772
effective search space: 6275875116552
effective search space used: 6275875116552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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