>MMP18_XENLA (O13065) Matrix metalloproteinase-18 precursor (EC 3.4.24.-)|
           (MMP-18) (Collagenase-4) (xCol4)
          Length = 467

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
 Frame = +2

Query: 56  PQKRTNQPPSSFQEGSKNY----NSAGA-GAVAGEKRHGKHLTMKLEQPRK 193
           P  + ++PP++ +E ++NY     S G  G   G K+H +  T KLEQ +K
Sbjct: 19  PADKQDEPPATKEEMAENYLKRFYSLGTDGGPVGRKKHIQPFTEKLEQMQK 69

>RBM15_HUMAN (Q96T37) Putative RNA-binding protein 15 (RNA-binding motif protein|
           15) (One-twenty two protein)
          Length = 977

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
 Frame = +3

Query: 42  ERSRGPKRERTNPPLPFKKGAKITTAPGPGPSPAK----NDTANTXXXXXXSQERTAIQR 209
           E+S+G KR+R N     +     TTAP  G SP K    +D +        S+ ++  Q+
Sbjct: 710 EKSQGDKRDRKNSASAERDRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQK 769

Query: 210 RGG 218
           + G
Sbjct: 770 QDG 772

>CRYD_GIBZE (Q4I1Q6) Putative crytochrome DASH|
          Length = 678

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 36  IDERSRGPKRERTNPPLPFKKGAKITTAP 122
           IDE+++ P RER  PPLP  +   + + P
Sbjct: 166 IDEKTQEPLRERPRPPLPRPQAGSLPSFP 194

>IF2_GLOVI (Q7NH85) Translation initiation factor IF-2|
          Length = 925

 Score = 26.2 bits (56), Expect(2) = 2.3
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 78  PPLPFKKGAKITTAPGPGPSPAKNDTANTXXXXXXSQERTAIQRRGG 218
           PP P    AK T AP P P P     +        +Q  +  ++RGG
Sbjct: 223 PPAP----AKPTPAPAPAPRPTAEQPSEPRRPQPPAQPPSRPEKRGG 265



 Score = 21.9 bits (45), Expect(2) = 2.3
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1

Query: 52  AAPKENEPTPL 84
           AAP E EPTPL
Sbjct: 197 AAPPEPEPTPL 207

>NANO1_HUMAN (Q8WY41) Nanos homolog 1 (NOS-1) (EC_Rep1a)|
          Length = 292

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 51  RGPKRERTNPPLPFKKGAKITTAPGPG-PSP 140
           R P+R R  PP+     A+  +APGP  P P
Sbjct: 9   RSPRRGRAPPPMALVPSARYVSAPGPAHPQP 39

>MBTP1_HUMAN (Q14703) Membrane-bound transcription factor site 1 protease|
           precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1
           protease) (Subtilisin/kexin-isozyme 1) (SKI-1)
          Length = 1052

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 77  PPSSFQEGSKNYNSAGAGAVAGEKRHGKHL 166
           PPS    G++    +GAG+V  E+  G HL
Sbjct: 876 PPSLSHSGNRQRPPSGAGSVTPERMEGNHL 905

>MYL4_RAT (P17209) Myosin light polypeptide 4 (Myosin light chain 1, atrial|
           isoform)
          Length = 192

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 81  PLPFKKGAKITTAPGPGPSPA 143
           P P K+ AK+  AP P P+PA
Sbjct: 5   PEPKKETAKVAAAPAPAPAPA 25

>IF2_CORJK (Q4JV51) Translation initiation factor IF-2|
          Length = 922

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 17/46 (36%), Positives = 18/46 (39%)
 Frame = +3

Query: 81  PLPFKKGAKITTAPGPGPSPAKNDTANTXXXXXXSQERTAIQRRGG 218
           P P   GAK    PGP P       AN         ER A + RGG
Sbjct: 147 PGPKPGGAKPGAKPGPKPGGRAPRVANNPFSSGAPAERPAPRPRGG 192

>CSP_PLACG (P08674) Circumsporozoite protein precursor (CS)|
          Length = 401

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 173 KLEQPRKDGDTATGGG 220
           KL+QPR+DG  A GGG
Sbjct: 91  KLKQPREDGAAAAGGG 106

>LEU31_ARATH (Q9SA14) 3-isopropylmalate dehydrogenase 1, chloroplast precursor|
           (EC 1.1.1.85) (Beta-IPM dehydrogenase 1) (IMDH 1)
           (3-IPM-DH 1)
          Length = 406

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +3

Query: 33  LIDERSRGPKRERTNPPLPFKKGAKITTAPGPGPSP 140
           L D + R P R R     P KK   IT  PG G  P
Sbjct: 21  LTDHKFRAPYRIRCAAASPVKKRYNITLLPGDGIGP 56

>K0310_HUMAN (O15027) Protein KIAA0310|
          Length = 2179

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +2

Query: 50  SRPQKRTNQPPSSFQEGSKNYNSAGAGAVAGEKRHGKHLTMKLEQPRKDGD 202
           ++PQ    QPP     G ++ N + A  V  + R G   +  LE P K G+
Sbjct: 573 AKPQPPVVQPPEEAMSGQQSRNPSSAAPV--QSRGGIGASENLENPPKMGE 621

>RBP2_MOUSE (Q9ERU9) Ran-binding protein 2 (RanBP2)|
          Length = 3053

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 50   SRPQKRTNQPPSSFQEGSKNYNSAGAGAVAG 142
            S+P  + ++ PS+F  GSK+ ++  AG+  G
Sbjct: 1643 SKPTHKPHEAPSAFTVGSKSQSNESAGSQVG 1673


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,488,231
Number of Sequences: 219361
Number of extensions: 601020
Number of successful extensions: 2404
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2388
length of database: 80,573,946
effective HSP length: 48
effective length of database: 70,044,618
effective search space used: 1681070832
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)