>gb|AC108829.13| Mus musculus chromosome 3, clone RP23-159D18, complete sequence
          Length = 184470

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 94    agaagggagcaaaaattacaac 115
             ||||||||||||||||||||||
Sbjct: 18323 agaagggagcaaaaattacaac 18302

>gb|AC169083.1| Mus musculus chromosome 3, clone RP23-28D7, complete sequence
          Length = 215143

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 94     agaagggagcaaaaattacaac 115
              ||||||||||||||||||||||
Sbjct: 163296 agaagggagcaaaaattacaac 163317

>gb|AC165280.3| Mus musculus chromosome 3, clone RP23-389C4, complete sequence
          Length = 201348

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 94     agaagggagcaaaaattacaac 115
              ||||||||||||||||||||||
Sbjct: 108686 agaagggagcaaaaattacaac 108707

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 118    cgccggggccggggccgtcgcc 139
              ||||||||||||||||||||||
Sbjct: 562920 cgccggggccggggccgtcgcc 562899

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 117     gcgccggggccggggccgtcgccgg 141
               |||||||||||||||||| ||||||
Sbjct: 1967685 gcgccggggccggggccggcgccgg 1967661

>ref|XM_658991.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6479.2), mRNA
          Length = 1869

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 116  agcgccggggccggggccgtc 136
            |||||||||||||||||||||
Sbjct: 1548 agcgccggggccggggccgtc 1528

>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14
          Length = 320050

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 117    gcgccggggccggggccgtcg 137
              |||||||||||||||||||||
Sbjct: 269205 gcgccggggccggggccgtcg 269185

>gb|S82324.1| calcium/calmodulin-dependent protein kinase homolog|CaM kinase
           homolog|MCK1 [Zea mays=maize, cv. Merit, root caps,
           mRNA, 2483 nt]
          Length = 2483

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 119 gccggggccggggccgtcgccggcg 143
           |||||||||||||||| ||||||||
Sbjct: 584 gccggggccggggccggcgccggcg 608

>dbj|D84507.1|MZECDPKA Zea mays mRNA for CDPK-related protein kinase, partial cds, clone
           ZmCRK1
          Length = 2140

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 119 gccggggccggggccgtcgccggcg 143
           |||||||||||||||| ||||||||
Sbjct: 328 gccggggccggggccggcgccggcg 352

>gb|AC153729.1| Mus musculus  BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 250801

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ccaacccccctcttcctttc 92
             ||||||||||||||||||||
Sbjct: 34063 ccaacccccctcttcctttc 34082

>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0066E19, complete sequence
          Length = 145575

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   gcgccggggccggggccgtcgccg 140
             |||||||||||||||||| |||||
Sbjct: 78955 gcgccggggccggggccgccgccg 78932

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 29       ttaattaatcgatgaaagga 48
                ||||||||||||||||||||
Sbjct: 32904852 ttaattaatcgatgaaagga 32904871

>gb|AC112260.6| Mus musculus BAC clone RP23-185L5 from chromosome 18, complete sequence
          Length = 216325

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    aagaagggagcaaaaattacaaca 116
             |||||| |||||||||||||||||
Sbjct: 40620 aagaagtgagcaaaaattacaaca 40643

>emb|CR674433.2|CNS0FJD3 Tetraodon nigroviridis full-length cDNA
          Length = 1313

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 acagcgccggggccggggcc 133
           ||||||||||||||||||||
Sbjct: 219 acagcgccggggccggggcc 200

>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete
             sequence
          Length = 151479

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ttaattaatcgatgaaagga 48
             ||||||||||||||||||||
Sbjct: 85323 ttaattaatcgatgaaagga 85304

>emb|AL513466.1|NCB18D24 Neurospora crassa DNA linkage group V BAC contig B18D24
          Length = 157180

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     aaccaacccccctcttcctt 90
              ||||||||||||||||||||
Sbjct: 120982 aaccaacccccctcttcctt 121001

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 117     gcgccggggccggggccgtcgccggcga 144
               |||||| ||||| |||||||||||||||
Sbjct: 2690547 gcgccgaggccgaggccgtcgccggcga 2690520

>gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 209599

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     ccaacccccctcttcctttc 92
              ||||||||||||||||||||
Sbjct: 106259 ccaacccccctcttcctttc 106240

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 117      gcgccggggccggggccgtcgccg 140
                |||||||||||||||||| |||||
Sbjct: 18681179 gcgccggggccggggccgccgccg 18681156

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 29       ttaattaatcgatgaaagga 48
                ||||||||||||||||||||
Sbjct: 32995362 ttaattaatcgatgaaagga 32995381

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 83       tcttcctttcaagaagggagcaaaaattacaacagc 118
                ||||| |||| ||||||| |||||||||||| ||||
Sbjct: 31292440 tcttcatttcgagaagggggcaaaaattacagcagc 31292475

>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0481E12
          Length = 161563

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 83    tcttcctttcaagaagggagcaaaaattacaacagc 118
             ||||| |||| ||||||| |||||||||||| ||||
Sbjct: 46723 tcttcatttcgagaagggggcaaaaattacagcagc 46758

>gb|AC099744.3| Papio anubis clone RP41-65E12, complete sequence
          Length = 173295

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    ccccctcttcctttcaagaa 97
             ||||||||||||||||||||
Sbjct: 23122 ccccctcttcctttcaagaa 23141

>ref|XM_312966.2| Anopheles gambiae str. PEST ENSANGP00000020378
           (ENSANGG00000017889), partial mRNA
          Length = 982

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 ggccggggccgtcgccggcg 143
           ||||||||||||||||||||
Sbjct: 739 ggccggggccgtcgccggcg 758

>ref|XM_307197.2| Anopheles gambiae str. PEST ENSANGP00000014576
           (ENSANGG00000012087), partial mRNA
          Length = 982

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 ggccggggccgtcgccggcg 143
           ||||||||||||||||||||
Sbjct: 739 ggccggggccgtcgccggcg 758

>dbj|AK073166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023G10, full
           insert sequence
          Length = 1145

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 83  tcttcctttcaagaagggagcaaaaattacaacagc 118
           ||||| |||| ||||||| |||||||||||| ||||
Sbjct: 977 tcttcatttcgagaagggggcaaaaattacagcagc 942

>emb|AL929505.14| Zebrafish DNA sequence from clone CH211-120K19 in linkage group 16,
              complete sequence
          Length = 178839

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     ggaatttttaagctttaatt 34
              ||||||||||||||||||||
Sbjct: 141673 ggaatttttaagctttaatt 141692

>gb|AC148983.2| Mus musculus BAC clone RP23-189G7 from 18, complete sequence
          Length = 212564

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 93     aagaagggagcaaaaattacaaca 116
              |||||| |||||||||||||||||
Sbjct: 117760 aagaagtgagcaaaaattacaaca 117737

>gb|AC134771.2| Homo sapiens chromosome 3 clone RP11-507B21, complete sequence
          Length = 25593

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    ttcaagaagggagcaaaaattaca 113
             |||||||||| |||||||||||||
Sbjct: 19742 ttcaagaaggcagcaaaaattaca 19765


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,749,499
Number of Sequences: 3902068
Number of extensions: 1749499
Number of successful extensions: 136231
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135656
Number of HSP's gapped (non-prelim): 575
length of query: 220
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 198
effective length of database: 17,147,199,772
effective search space: 3395145554856
effective search space used: 3395145554856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)