Clone Name | rbart54a06 |
---|---|
Clone Library Name | barley_pub |
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ttaacaaaatatacagacta 102 |||||||||||||||||||| Sbjct: 1362743 ttaacaaaatatacagacta 1362724
>ref|NM_122730.1| Arabidopsis thaliana transporter AT5G28470 mRNA, complete cds Length = 1686 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatacagactaacatcagt 110 |||||||||||||||||||| Sbjct: 596 atatacagactaacatcagt 615
>gb|AY809038.1| Schistosoma japonicum SJCHGC03874 protein mRNA, partial cds Length = 764 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gcagaaaaaagcatggaaca 384 |||||||||||||||||||| Sbjct: 679 gcagaaaaaagcatggaaca 660
>gb|AC073101.7| Homo sapiens BAC clone RP11-445E22 from 7, complete sequence Length = 96699 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 gtctttggctagctttaatg 415 |||||||||||||||||||| Sbjct: 86233 gtctttggctagctttaatg 86252
>gb|AC138116.4| Mus musculus BAC clone RP24-242H5 from chromosome 15, complete sequence Length = 164014 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 agaaaaaagcatggaacatg 386 |||||||||||||||||||| Sbjct: 93185 agaaaaaagcatggaacatg 93204
>gb|AC122339.3| Mus musculus BAC clone RP23-353L10 from chromosome 5, complete sequence Length = 203685 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tgtcctgtcactcaaaccac 304 |||||||||||||||||||| Sbjct: 54447 tgtcctgtcactcaaaccac 54466
>gb|DQ446993.1| Arabidopsis thaliana clone pENTR221-At5g28470 proton-dependent oligopeptide transport family protein (At5g28470) mRNA, complete cds Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatacagactaacatcagt 110 |||||||||||||||||||| Sbjct: 596 atatacagactaacatcagt 615
>gb|AC134420.8| Mus musculus chromosome 15, clone RP23-478J5, complete sequence Length = 190455 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 agaaaaaagcatggaacatg 386 |||||||||||||||||||| Sbjct: 140353 agaaaaaagcatggaacatg 140334
>gb|AC162465.3| Mus musculus 6 BAC RP24-108G5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203546 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 actcaaaccacccagaaaca 313 |||||||||||||||||||| Sbjct: 88896 actcaaaccacccagaaaca 88877
>gb|AC023403.9| Homo sapiens chromosome 8, clone RP11-563N12, complete sequence Length = 193461 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 304 cccagaaacatcgcatcatcgccctgga 331 |||||||||||| |||||| |||||||| Sbjct: 167010 cccagaaacatctcatcattgccctgga 166983
>dbj|AK143842.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430204C11 product:hypothetical protein, full insert sequence Length = 2112 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 actcaaaccacccagaaaca 313 |||||||||||||||||||| Sbjct: 410 actcaaaccacccagaaaca 429
>gb|AC155238.2| Mus musculus BAC clone RP24-445E24 from chromosome 12, complete sequence Length = 128680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ggatggtgcttccaacaggt 460 |||||||||||||||||||| Sbjct: 18888 ggatggtgcttccaacaggt 18869
>dbj|AK041150.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530085O15 product:weakly similar to ALDEHYDE DEHYDROGENASE 8 (EC 1.2.1.5) [Homo sapiens], full insert sequence Length = 2151 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 ggcaaacattctcgacgatgccta 71 |||||||||||||||||| ||||| Sbjct: 670 ggcaaacattctcgacgacgccta 693
>gb|AF262039.1|F24J2 Arabidopsis thaliana BAC F24J2 Length = 80472 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatacagactaacatcagt 110 |||||||||||||||||||| Sbjct: 41610 atatacagactaacatcagt 41629
>gb|AC158657.2| Mus musculus 6 BAC RP23-395C12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202215 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 actcaaaccacccagaaaca 313 |||||||||||||||||||| Sbjct: 53389 actcaaaccacccagaaaca 53408
>gb|BC091230.1| Rattus norvegicus neuropathy target esterase like 1, mRNA (cDNA clone MGC:108975 IMAGE:7321805), complete cds Length = 4472 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 cttgtcctcatcaccctcat 481 |||||||||||||||||||| Sbjct: 3257 cttgtcctcatcaccctcat 3276
>emb|CT030196.9| Mouse DNA sequence from clone RP23-282B14 on chromosome 12, complete sequence Length = 215752 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ggatggtgcttccaacaggt 460 |||||||||||||||||||| Sbjct: 121045 ggatggtgcttccaacaggt 121064 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,549,022 Number of Sequences: 3902068 Number of extensions: 4549022 Number of successful extensions: 84230 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84193 Number of HSP's gapped (non-prelim): 37 length of query: 496 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 474 effective length of database: 17,147,199,772 effective search space: 8127772691928 effective search space used: 8127772691928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)