Clone Name | rbart54a01 |
---|---|
Clone Library Name | barley_pub |
>gb|BT018284.1| Zea mays clone EL01T0205A04.c mRNA sequence Length = 954 Score = 341 bits (172), Expect = 1e-90 Identities = 331/384 (86%) Strand = Plus / Minus Query: 163 tcatatctcgccgtcccagagctcctcgagggacttgtaaggcccgtggtcggacacgta 222 |||||||||||||||||| |||||||||| ||||||||| |||||||| ||||| ||||| Sbjct: 757 tcatatctcgccgtcccatagctcctcgaaggacttgtagggcccgtgctcggagacgta 698 Query: 223 gcgcttgccgaggttgatcttgcgctgcgggatctcggcgatcctgcggcgctcctcctc 282 ||| ||| |||||||||| ||||| ||||||| | ||| | | | ||||||||| Sbjct: 697 gcgacggccctggttgatcttccgctgggggatcttgctgatgcgctgcctctcctcctc 638 Query: 283 cgtgagctcccagccgtccacgtccaggttctcccgcatccgggcctcgtcgaagctctt 342 | ||||||||| | | | ||||||||||||| |||||| |||||||||||||||| Sbjct: 637 gctcagctcccagtccacgatgtccaggttctccttcatccgcccctcgtcgaagctctt 578 Query: 343 gacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgcgccacgctctt 402 ||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 577 cacgatcaggcagtcgccctgctcgtacacccacctcaggcacacctgtgccacggtctt 518 Query: 403 gcccctggacgcggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgcccca 462 |||| ||||| |||||| || ||||||||||||| ||||||||| | |||||||||||| Sbjct: 517 gcccttggacttggcgatctcgtgcaggacgccggagtccatcaccgagtcgctgcccca 458 Query: 463 gtgcgtgcccttggccccaagcggcgagtaggcgcacagctggatgcccttgcccctgca 522 ||||||||||||||| || || |||||||||||||| |||||||||||||| ||||||| Sbjct: 457 gtgcgtgcccttggcgcccaggggcgagtaggcgcatagctggatgcccttcgccctgca 398 Query: 523 gaactccctcagcttcctctgctg 546 ||||||||||||||||| |||||| Sbjct: 397 gaactccctcagcttccgctgctg 374
>gb|AY107814.1| Zea mays PCO145322 mRNA sequence Length = 1111 Score = 341 bits (172), Expect = 1e-90 Identities = 331/384 (86%) Strand = Plus / Minus Query: 163 tcatatctcgccgtcccagagctcctcgagggacttgtaaggcccgtggtcggacacgta 222 |||||||||||||||||| |||||||||| ||||||||| |||||||| ||||| ||||| Sbjct: 913 tcatatctcgccgtcccatagctcctcgaaggacttgtagggcccgtgctcggagacgta 854 Query: 223 gcgcttgccgaggttgatcttgcgctgcgggatctcggcgatcctgcggcgctcctcctc 282 ||| ||| |||||||||| ||||| ||||||| | ||| | | | ||||||||| Sbjct: 853 gcgacggccctggttgatcttccgctgggggatcttgctgatgcgctgcctctcctcctc 794 Query: 283 cgtgagctcccagccgtccacgtccaggttctcccgcatccgggcctcgtcgaagctctt 342 | ||||||||| | | | ||||||||||||| |||||| |||||||||||||||| Sbjct: 793 gctcagctcccagtccacgatgtccaggttctccttcatccgcccctcgtcgaagctctt 734 Query: 343 gacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgcgccacgctctt 402 ||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 733 cacgatcaggcagtcgccctgctcgtacacccacctcaggcacacctgtgccacggtctt 674 Query: 403 gcccctggacgcggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgcccca 462 |||| ||||| |||||| || ||||||||||||| ||||||||| | |||||||||||| Sbjct: 673 gcccttggacttggcgatctcgtgcaggacgccggagtccatcaccgagtcgctgcccca 614 Query: 463 gtgcgtgcccttggccccaagcggcgagtaggcgcacagctggatgcccttgcccctgca 522 ||||||||||||||| || || |||||||||||||| |||||||||||||| ||||||| Sbjct: 613 gtgcgtgcccttggcgcccaggggcgagtaggcgcatagctggatgcccttcgccctgca 554 Query: 523 gaactccctcagcttcctctgctg 546 ||||||||||||||||| |||||| Sbjct: 553 gaactccctcagcttccgctgctg 530
>gb|BT016593.1| Zea mays clone Contig426 mRNA sequence Length = 1316 Score = 333 bits (168), Expect = 4e-88 Identities = 330/384 (85%) Strand = Plus / Minus Query: 163 tcatatctcgccgtcccagagctcctcgagggacttgtaaggcccgtggtcggacacgta 222 ||||||||||||| |||| |||||||||| ||||||||| |||||||| ||||| ||||| Sbjct: 1093 tcatatctcgccggcccatagctcctcgaaggacttgtagggcccgtgctcggagacgta 1034 Query: 223 gcgcttgccgaggttgatcttgcgctgcgggatctcggcgatcctgcggcgctcctcctc 282 ||| ||| |||||||||| ||||| ||||||| | ||| | | | ||||||||| Sbjct: 1033 gcgacggccctggttgatcttccgctgggggatcttgctgatgcgctgcctctcctcctc 974 Query: 283 cgtgagctcccagccgtccacgtccaggttctcccgcatccgggcctcgtcgaagctctt 342 | ||||||||| | | | ||||||||||||| |||||| |||||||||||||||| Sbjct: 973 gctcagctcccagtccacgatgtccaggttctccttcatccgcccctcgtcgaagctctt 914 Query: 343 gacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgcgccacgctctt 402 ||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 913 cacgatcaggcagtcgccctgctcgtacacccacctcaggcacacctgtgccacggtctt 854 Query: 403 gcccctggacgcggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgcccca 462 |||| ||||| |||||| || ||||||||||||| ||||||||| | |||||||||||| Sbjct: 853 gcccttggacttggcgatctcgtgcaggacgccggagtccatcaccgagtcgctgcccca 794 Query: 463 gtgcgtgcccttggccccaagcggcgagtaggcgcacagctggatgcccttgcccctgca 522 ||||||||||||||| || || |||||||||||||| |||||||||||||| ||||||| Sbjct: 793 gtgcgtgcccttggcgcccaggggcgagtaggcgcatagctggatgcccttcgccctgca 734 Query: 523 gaactccctcagcttcctctgctg 546 ||||||||||||||||| |||||| Sbjct: 733 gaactccctcagcttccgctgctg 710
>dbj|AK073738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064L19, full insert sequence Length = 1285 Score = 327 bits (165), Expect = 2e-86 Identities = 330/385 (85%) Strand = Plus / Minus Query: 162 ctcatatctcgccgtcccagagctcctcgagggacttgtaaggcccgtggtcggacacgt 221 |||||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 998 ctcatatctcgccgtcccagaggtcgtcgagcgacttgtagggcccgtggtcggagacga 939 Query: 222 agcgcttgccgaggttgatcttgcgctgcgggatctcggcgatcctgcggcgctcctcct 281 |||| | | |||||||||| ||||||||||| |||||||||| | | |||||||| Sbjct: 938 agcggagggcacggttgatcttccgctgcgggatgccggcgatcctctgcctctcctcct 879 Query: 282 ccgtgagctcccagccgtccacgtccaggttctcccgcatccgggcctcgtcgaagctct 341 |||| |||||||| ||| | | ||||||||||||||||||||| |||||||||||||||| Sbjct: 878 ccgtcagctcccatccgacgatgtccaggttctcccgcatccgcgcctcgtcgaagctct 819 Query: 342 tgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgcgccacgctct 401 | ||||| ||||||||||| ||||||||||||||||||||||||||||| || ||| ||| Sbjct: 818 tcacgatcaggcagtccccttgctcgtacacccacctcaggcacacctgggctacggtct 759 Query: 402 tgcccctggacgcggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgcccc 461 ||||| |||| ||||||||| | || ||| ||| | |||| |||| ||||||||||| Sbjct: 758 tgcccttggattgggcgatgtcgcggagcacggcggaggccatgacggagtcgctgcccc 699 Query: 462 agtgcgtgcccttggccccaagcggcgagtaggcgcacagctggatgcccttgcccctgc 521 |||||||||| |||| || ||||||||||||||||| | ||||| |||||| |||||| Sbjct: 698 agtgcgtgccgctggcgcccagcggcgagtaggcgcagatctggacgcccttctccctgc 639 Query: 522 agaactccctcagcttcctctgctg 546 | | ||||||||||||||||||||| Sbjct: 638 acagctccctcagcttcctctgctg 614
>ref|XM_470638.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 280 bits (141), Expect = 5e-72 Identities = 329/393 (83%), Gaps = 9/393 (2%) Strand = Plus / Minus Query: 163 tcatatctcgccgtcccagagctcctcgagggacttgtaaggcccgtggtcggacacgta 222 ||||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||| | Sbjct: 966 tcatatctcgccgtcccagaggtcgtcgagcgacttgtagggcccgtggtcggagacgaa 907 Query: 223 gcgcttgccgaggttgatcttgcgctgcgggatctcggcgatcctgcggcgctcctcctc 282 ||| | | |||||||||| ||||||||||| |||||||||| | | ||||||||| Sbjct: 906 gcggagggcacggttgatcttccgctgcgggatgccggcgatcctctgcctctcctcctc 847 Query: 283 cgtgagctcccagccgtccacgtccaggttctcccgcatccgggcctcgtcgaagctctt 342 ||| |||||||| ||| | | ||||||||||||||||||||| ||||||||||||||||| Sbjct: 846 cgtcagctcccatccgacgatgtccaggttctcccgcatccgcgcctcgtcgaagctctt 787 Query: 343 gacgatgaggcagtccccctgctcgtacacccacctcaggcaca---------cctgcgc 393 ||||| ||||||||||| ||||||||||||||||||||||||| |||| || Sbjct: 786 cacgatcaggcagtccccttgctcgtacacccacctcaggcacacgtgacgtgcctgggc 727 Query: 394 cacgctcttgcccctggacgcggcgatgtcctgcaggacgccggcgtccatcacggcgtc 453 ||| |||||||| |||| ||||||||| | || ||| ||| | |||| |||| ||| Sbjct: 726 tacggtcttgcccttggattgggcgatgtcgcggagcacggcggaggccatgacggagtc 667 Query: 454 gctgccccagtgcgtgcccttggccccaagcggcgagtaggcgcacagctggatgccctt 513 |||||||||||||||||| |||| || ||||||||||||||||| | ||||| |||||| Sbjct: 666 gctgccccagtgcgtgccgctggcgcccagcggcgagtaggcgcagatctggacgccctt 607 Query: 514 gcccctgcagaactccctcagcttcctctgctg 546 ||||||| | ||||||||||||||||||||| Sbjct: 606 ctccctgcacagctccctcagcttcctctgctg 574
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 234 bits (118), Expect = 2e-58 Identities = 202/230 (87%) Strand = Plus / Minus Query: 162 ctcatatctcgccgtcccagagctcctcgagggacttgtaaggcccgtggtcggacacgt 221 |||||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 7200980 ctcatatctcgccgtcccagaggtcgtcgagcgacttgtagggcccgtggtcggagacga 7200921 Query: 222 agcgcttgccgaggttgatcttgcgctgcgggatctcggcgatcctgcggcgctcctcct 281 |||| | | |||||||||| ||||||||||| |||||||||| | | |||||||| Sbjct: 7200920 agcggagggcacggttgatcttccgctgcgggatgccggcgatcctctgcctctcctcct 7200861 Query: 282 ccgtgagctcccagccgtccacgtccaggttctcccgcatccgggcctcgtcgaagctct 341 |||| |||||||| ||| | | ||||||||||||||||||||| |||||||||||||||| Sbjct: 7200860 ccgtcagctcccatccgacgatgtccaggttctcccgcatccgcgcctcgtcgaagctct 7200801 Query: 342 tgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgc 391 | ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 7200800 tcacgatcaggcagtccccttgctcgtacacccacctcaggcacacctgc 7200751 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 441 ccatcacggcgtcgctgccccagtgcgtgcccttggccccaagcggcgagtaggcgcaca 500 |||| |||| ||||||||||||||||||||| |||| || ||||||||||||||||| | Sbjct: 7200616 ccatgacggagtcgctgccccagtgcgtgccgctggcgcccagcggcgagtaggcgcaga 7200557 Query: 501 gctggatgcccttgcccctgcagaactccctcagcttcctctgctg 546 ||||| |||||| ||||||| | ||||||||||||||||||||| Sbjct: 7200556 tctggacgcccttctccctgcacagctccctcagcttcctctgctg 7200511
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 234 bits (118), Expect = 2e-58 Identities = 202/230 (87%) Strand = Plus / Minus Query: 162 ctcatatctcgccgtcccagagctcctcgagggacttgtaaggcccgtggtcggacacgt 221 |||||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 7198875 ctcatatctcgccgtcccagaggtcgtcgagcgacttgtagggcccgtggtcggagacga 7198816 Query: 222 agcgcttgccgaggttgatcttgcgctgcgggatctcggcgatcctgcggcgctcctcct 281 |||| | | |||||||||| ||||||||||| |||||||||| | | |||||||| Sbjct: 7198815 agcggagggcacggttgatcttccgctgcgggatgccggcgatcctctgcctctcctcct 7198756 Query: 282 ccgtgagctcccagccgtccacgtccaggttctcccgcatccgggcctcgtcgaagctct 341 |||| |||||||| ||| | | ||||||||||||||||||||| |||||||||||||||| Sbjct: 7198755 ccgtcagctcccatccgacgatgtccaggttctcccgcatccgcgcctcgtcgaagctct 7198696 Query: 342 tgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgc 391 | ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 7198695 tcacgatcaggcagtccccttgctcgtacacccacctcaggcacacctgc 7198646 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 441 ccatcacggcgtcgctgccccagtgcgtgcccttggccccaagcggcgagtaggcgcaca 500 |||| |||| ||||||||||||||||||||| |||| || ||||||||||||||||| | Sbjct: 7198511 ccatgacggagtcgctgccccagtgcgtgccgctggcgcccagcggcgagtaggcgcaga 7198452 Query: 501 gctggatgcccttgcccctgcagaactccctcagcttcctctgctg 546 ||||| |||||| ||||||| | ||||||||||||||||||||| Sbjct: 7198451 tctggacgcccttctccctgcacagctccctcagcttcctctgctg 7198406
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05, complete sequence Length = 99133 Score = 234 bits (118), Expect = 2e-58 Identities = 202/230 (87%) Strand = Plus / Minus Query: 162 ctcatatctcgccgtcccagagctcctcgagggacttgtaaggcccgtggtcggacacgt 221 |||||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||| Sbjct: 27733 ctcatatctcgccgtcccagaggtcgtcgagcgacttgtagggcccgtggtcggagacga 27674 Query: 222 agcgcttgccgaggttgatcttgcgctgcgggatctcggcgatcctgcggcgctcctcct 281 |||| | | |||||||||| ||||||||||| |||||||||| | | |||||||| Sbjct: 27673 agcggagggcacggttgatcttccgctgcgggatgccggcgatcctctgcctctcctcct 27614 Query: 282 ccgtgagctcccagccgtccacgtccaggttctcccgcatccgggcctcgtcgaagctct 341 |||| |||||||| ||| | | ||||||||||||||||||||| |||||||||||||||| Sbjct: 27613 ccgtcagctcccatccgacgatgtccaggttctcccgcatccgcgcctcgtcgaagctct 27554 Query: 342 tgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgc 391 | ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 27553 tcacgatcaggcagtccccttgctcgtacacccacctcaggcacacctgc 27504 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 441 ccatcacggcgtcgctgccccagtgcgtgcccttggccccaagcggcgagtaggcgcaca 500 |||| |||| ||||||||||||||||||||| |||| || ||||||||||||||||| | Sbjct: 27369 ccatgacggagtcgctgccccagtgcgtgccgctggcgcccagcggcgagtaggcgcaga 27310 Query: 501 gctggatgcccttgcccctgcagaactccctcagcttcctctgctg 546 ||||| |||||| ||||||| | ||||||||||||||||||||| Sbjct: 27309 tctggacgcccttctccctgcacagctccctcagcttcctctgctg 27264
>ref|NM_194581.1| Oryza sativa (japonica cultivar-group) putative NADPH-dependent oxidoreductase (OSJNBb0012A20.18), mRNA Length = 966 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 414 cggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccct 473 ||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 715 cggcgatctcctgcaggacgccggagtccatcacggcggcgctgccccacggcgtgccct 656 Query: 474 tggccccaagcggcgagtaggcgcacagctg 504 | ||||| ||||||||||| |||||||||| Sbjct: 655 tcgcccccagcggcgagtacccgcacagctg 625
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 414 cggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccct 473 ||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 127018 cggcgatctcctgcaggacgccggagtccatcacggcggcgctgccccacggcgtgccct 126959 Query: 474 tggccccaagcggcgagtaggcgcacagctg 504 | ||||| ||||||||||| |||||||||| Sbjct: 126958 tcgcccccagcggcgagtacccgcacagctg 126928 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 415 ggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccctt 474 ||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||| Sbjct: 130099 ggcgatgtcgtgcaggacgccggagtccatcaccgcggcgctgccccacggcgtgccctt 130040 Query: 475 ggccccaagcggcgagtaggcgcacagctg 504 ||||| ||||||||||| |||||||||| Sbjct: 130039 cgcccccagcggcgagtacccgcacagctg 130010
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 414 cggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccct 473 ||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 846161 cggcgatctcctgcaggacgccggagtccatcacggcggcgctgccccacggcgtgccct 846102 Query: 474 tggccccaagcggcgagtaggcgcacagctg 504 | ||||| ||||||||||| |||||||||| Sbjct: 846101 tcgcccccagcggcgagtacccgcacagctg 846071 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 415 ggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccctt 474 ||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||| Sbjct: 849242 ggcgatgtcgtgcaggacgccggagtccatcaccgcggcgctgccccacggcgtgccctt 849183 Query: 475 ggccccaagcggcgagtaggcgcacagctg 504 ||||| ||||||||||| |||||||||| Sbjct: 849182 cgcccccagcggcgagtacccgcacagctg 849153 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgc 391 ||||||||||||||| | ||| || || ||||| | || |||||||||||| |||||| Sbjct: 905140 gaagctcttgacgattatgcaatcgccttgctcatgcagccacctcaggcatacctgc 905083 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacct 389 ||||||||||||||| | || || || ||||| ||||||||||||| ||| |||| Sbjct: 895471 gaagctcttgacgattacacaatctccttgctcatacacccacctcaagcatacct 895416
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12, complete sequence Length = 129420 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 414 cggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccct 473 ||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 90021 cggcgatctcctgcaggacgccggagtccatcacggcggcgctgccccacggcgtgccct 90080 Query: 474 tggccccaagcggcgagtaggcgcacagctg 504 | ||||| ||||||||||| |||||||||| Sbjct: 90081 tcgcccccagcggcgagtacccgcacagctg 90111 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 415 ggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccctt 474 ||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||| Sbjct: 86940 ggcgatgtcgtgcaggacgccggagtccatcaccgcggcgctgccccacggcgtgccctt 86999 Query: 475 ggccccaagcggcgagtaggcgcacagctg 504 ||||| ||||||||||| |||||||||| Sbjct: 87000 cgcccccagcggcgagtacccgcacagctg 87029 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Plus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgc 391 ||||||||||||||| | ||| || || ||||| | || |||||||||||| |||||| Sbjct: 31042 gaagctcttgacgattatgcaatcgccttgctcatgcagccacctcaggcatacctgc 31099 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacct 389 ||||||||||||||| | || || || ||||| ||||||||||||| ||| |||| Sbjct: 40711 gaagctcttgacgattacacaatctccttgctcatacacccacctcaagcatacct 40766
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 414 cggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccct 473 ||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 846161 cggcgatctcctgcaggacgccggagtccatcacggcggcgctgccccacggcgtgccct 846102 Query: 474 tggccccaagcggcgagtaggcgcacagctg 504 | ||||| ||||||||||| |||||||||| Sbjct: 846101 tcgcccccagcggcgagtacccgcacagctg 846071 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 415 ggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccctt 474 ||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||| Sbjct: 849242 ggcgatgtcgtgcaggacgccggagtccatcaccgcggcgctgccccacggcgtgccctt 849183 Query: 475 ggccccaagcggcgagtaggcgcacagctg 504 ||||| ||||||||||| |||||||||| Sbjct: 849182 cgcccccagcggcgagtacccgcacagctg 849153 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgc 391 ||||||||||||||| | ||| || || ||||| | || |||||||||||| |||||| Sbjct: 905140 gaagctcttgacgattatgcaatcgccttgctcatgcagccacctcaggcatacctgc 905083 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgtcgaagctcttgacgatgaggc 353 |||||||||| ||||||||||||| Sbjct: 7146640 cgtcgaagctgttgacgatgaggc 7146663 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacct 389 ||||||||||||||| | || || || ||||| ||||||||||||| ||| |||| Sbjct: 895471 gaagctcttgacgattacacaatctccttgctcatacacccacctcaagcatacct 895416
>dbj|AK109414.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B07, full insert sequence Length = 1180 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 414 cggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccct 473 ||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 763 cggcgatctcctgcaggacgccggagtccatcacggcggcgctgccccacggcgtgccct 704 Query: 474 tggccccaagcggcgagtaggcgcacagctg 504 | ||||| ||||||||||| |||||||||| Sbjct: 703 tcgcccccagcggcgagtacccgcacagctg 673
>dbj|AK102609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099C09, full insert sequence Length = 1215 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 414 cggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccct 473 ||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 764 cggcgatctcctgcaggacgccggagtccatcacggcggcgctgccccacggcgtgccct 705 Query: 474 tggccccaagcggcgagtaggcgcacagctg 504 | ||||| ||||||||||| |||||||||| Sbjct: 704 tcgcccccagcggcgagtacccgcacagctg 674
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 414 cggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccct 473 ||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 846158 cggcgatctcctgcaggacgccggagtccatcacggcggcgctgccccacggcgtgccct 846099 Query: 474 tggccccaagcggcgagtaggcgcacagctg 504 | ||||| ||||||||||| |||||||||| Sbjct: 846098 tcgcccccagcggcgagtacccgcacagctg 846068 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 415 ggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccctt 474 ||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||| Sbjct: 849239 ggcgatgtcgtgcaggacgccggagtccatcaccgcggcgctgccccacggcgtgccctt 849180 Query: 475 ggccccaagcggcgagtaggcgcacagctg 504 ||||| ||||||||||| |||||||||| Sbjct: 849179 cgcccccagcggcgagtacccgcacagctg 849150 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgc 391 ||||||||||||||| | ||| || || ||||| | || |||||||||||| |||||| Sbjct: 905137 gaagctcttgacgattatgcaatcgccttgctcatgcagccacctcaggcatacctgc 905080 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgtcgaagctcttgacgatgaggc 353 |||||||||| ||||||||||||| Sbjct: 7149926 cgtcgaagctgttgacgatgaggc 7149949 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacct 389 ||||||||||||||| | || || || ||||| ||||||||||||| ||| |||| Sbjct: 895468 gaagctcttgacgattacacaatctccttgctcatacacccacctcaagcatacct 895413
>dbj|AK061106.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B11, full insert sequence Length = 1192 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 414 cggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccct 473 ||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 763 cggcgatctcctgcaggacgccggagtccatcacggcggcgctgccccacggcgtgccct 704 Query: 474 tggccccaagcggcgagtaggcgcacagctg 504 | ||||| || |||||||| |||||||||| Sbjct: 703 tcgcccccagaggcgagtacccgcacagctg 673
>ref|NM_194582.1| Oryza sativa (japonica cultivar-group) putative NADPH-dependent oxidoreductase (OSJNBb0012A20.19), mRNA Length = 969 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 415 ggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccctt 474 ||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||| Sbjct: 720 ggcgatgtcgtgcaggacgccggagtccatcaccgcggcgctgccccacggcgtgccctt 661 Query: 475 ggccccaagcggcgagtaggcgcacagctg 504 ||||| ||||||||||| |||||||||| Sbjct: 660 cgcccccagcggcgagtacccgcacagctg 631
>dbj|AK103772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143K18, full insert sequence Length = 1208 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 415 ggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccctt 474 ||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||| Sbjct: 745 ggcgatgtcgtgcaggacgccggagtccatcaccgcggcgctgccccacggcgtgccctt 686 Query: 475 ggccccaagcggcgagtaggcgcacagctg 504 ||||| ||||||||||| |||||||||| Sbjct: 685 cgcccccagcggcgagtacccgcacagctg 656
>dbj|AK059942.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-F11, full insert sequence Length = 1093 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 415 ggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccctt 474 ||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||| Sbjct: 697 ggcgatgtcgtgcaggacgccggagtccatcaccgcggcgctgccccacggcgtgccctt 638 Query: 475 ggccccaagcggcgagtaggcgcacagctg 504 ||||| ||||||||||| |||||||||| Sbjct: 637 cgcccccagcggcgagtacccgcacagctg 608
>ref|XM_474601.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1014 Score = 48.1 bits (24), Expect = 0.030 Identities = 69/84 (82%) Strand = Plus / Minus Query: 413 gcggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccc 472 ||||||| ||| ||||| |||||| || ||| ||||||||| ||||||||||| ||| Sbjct: 764 gcggcgacgtcgtgcagcacgccgctgttcatgacggcgtcggagccccagtgcgcgccg 705 Query: 473 ttggccccaagcggcgagtaggcg 496 | || || ||||||||||||||| Sbjct: 704 tgcgcgccgagcggcgagtaggcg 681 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 167 atctcgccgtcccagagctcctcgagggacttgta 201 ||||||||||||||||| || | |||||||||||| Sbjct: 1010 atctcgccgtcccagaggtcgtggagggacttgta 976
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06, complete sequence Length = 129608 Score = 48.1 bits (24), Expect = 0.030 Identities = 69/84 (82%) Strand = Plus / Plus Query: 413 gcggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccc 472 ||||||| ||| ||||| |||||| || ||| ||||||||| ||||||||||| ||| Sbjct: 2500 gcggcgacgtcgtgcagcacgccgctgttcatgacggcgtcggagccccagtgcgcgccg 2559 Query: 473 ttggccccaagcggcgagtaggcg 496 | || || ||||||||||||||| Sbjct: 2560 tgcgcgccgagcggcgagtaggcg 2583 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 167 atctcgccgtcccagagctcctcgagggacttgta 201 ||||||||||||||||| || | |||||||||||| Sbjct: 742 atctcgccgtcccagaggtcgtggagggacttgta 776
>emb|AL662949.4|OSJN00144 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I21, complete sequence Length = 127162 Score = 48.1 bits (24), Expect = 0.030 Identities = 69/84 (82%) Strand = Plus / Minus Query: 413 gcggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccc 472 ||||||| ||| ||||| |||||| || ||| ||||||||| ||||||||||| ||| Sbjct: 5272 gcggcgacgtcgtgcagcacgccgctgttcatgacggcgtcggagccccagtgcgcgccg 5213 Query: 473 ttggccccaagcggcgagtaggcg 496 | || || ||||||||||||||| Sbjct: 5212 tgcgcgccgagcggcgagtaggcg 5189 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 167 atctcgccgtcccagagctcctcgagggacttgta 201 ||||||||||||||||| || | |||||||||||| Sbjct: 7030 atctcgccgtcccagaggtcgtggagggacttgta 6996
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.030 Identities = 69/84 (82%) Strand = Plus / Plus Query: 413 gcggcgatgtcctgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgccc 472 ||||||| ||| ||||| |||||| || ||| ||||||||| ||||||||||| ||| Sbjct: 4612206 gcggcgacgtcgtgcagcacgccgctgttcatgacggcgtcggagccccagtgcgcgccg 4612265 Query: 473 ttggccccaagcggcgagtaggcg 496 | || || ||||||||||||||| Sbjct: 4612266 tgcgcgccgagcggcgagtaggcg 4612289 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 167 atctcgccgtcccagagctcctcgagggacttgta 201 ||||||||||||||||| || | |||||||||||| Sbjct: 4610448 atctcgccgtcccagaggtcgtggagggacttgta 4610482
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 tcggcgatcctgcggcgctcctc 279 ||||||||||||||||||||||| Sbjct: 2404835 tcggcgatcctgcggcgctcctc 2404857
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 tcggcgatcctgcggcgctcctc 279 ||||||||||||||||||||||| Sbjct: 327440 tcggcgatcctgcggcgctcctc 327462
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 tcggcgatcctgcggcgctcctc 279 ||||||||||||||||||||||| Sbjct: 181657 tcggcgatcctgcggcgctcctc 181679
>emb|BX470176.11| Zebrafish DNA sequence from clone CH211-120C23 in linkage group 7, complete sequence Length = 176596 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 tagcaaacatcttcattcattca 25 ||||||||||||||||||||||| Sbjct: 4261 tagcaaacatcttcattcattca 4239
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 257 tcggcgatcctgcggcgctcctc 279 ||||||||||||||||||||||| Sbjct: 1930245 tcggcgatcctgcggcgctcctc 1930223
>dbj|AK108398.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-F12, full insert sequence Length = 1181 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 167 atctcgccgtcccagagctcctcgagggacttgta 201 ||||||||||||||||| || | |||||||||||| Sbjct: 1054 atctcgccgtcccagaggtcgtggagggacttgta 1020 Score = 40.1 bits (20), Expect = 7.4 Identities = 59/72 (81%) Strand = Plus / Minus Query: 425 tgcaggacgccggcgtccatcacggcgtcgctgccccagtgcgtgcccttggccccaagc 484 ||||| |||||| || ||| ||||||||| ||||||||||| ||| | || || ||| Sbjct: 796 tgcagcacgccgctgttcatgacggcgtcggagccccagtgcgcgccgtgcgcgccgagc 737 Query: 485 ggcgagtaggcg 496 |||||||||||| Sbjct: 736 ggcgagtaggcg 725
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Plus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctgc 391 ||||||||||||||| | ||| || || ||||| | || |||||||||||| |||||| Sbjct: 97414 gaagctcttgacgattatgcaatcgccttgctcatgcagccacctcaggcatacctgc 97471 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacct 389 ||||||||||||||| | || || || ||||| ||||||||||||| ||| |||| Sbjct: 107083 gaagctcttgacgattacacaatctccttgctcatacacccacctcaagcatacct 107138
>gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosome 5, complete sequence Length = 215766 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 aacatcttcattcattcactga 29 |||||||||||||||||||||| Sbjct: 156975 aacatcttcattcattcactga 156996
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 gtcctgcaggacgccggcgtcc 442 |||||||||||||||||||||| Sbjct: 1298554 gtcctgcaggacgccggcgtcc 1298533
>gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, complete sequence Length = 215786 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 aacatcttcattcattcactga 29 |||||||||||||||||||||| Sbjct: 58793 aacatcttcattcattcactga 58772
>ref|XM_972612.1| PREDICTED: Mus musculus zinc finger protein 664 (Zfp664), mRNA Length = 3680 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 aacatcttcattcattcactga 29 |||||||||||||||||||||| Sbjct: 2336 aacatcttcattcattcactga 2357
>ref|XM_355639.4| PREDICTED: Mus musculus zinc finger protein 664 (Zfp664), mRNA Length = 3680 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 aacatcttcattcattcactga 29 |||||||||||||||||||||| Sbjct: 2336 aacatcttcattcattcactga 2357
>ref|XM_917146.2| PREDICTED: Mus musculus zinc finger protein 664 (Zfp664), mRNA Length = 3681 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 aacatcttcattcattcactga 29 |||||||||||||||||||||| Sbjct: 2337 aacatcttcattcattcactga 2358
>gb|AC122930.4| Mus musculus BAC clone RP23-13L19 from chromosome 9, complete sequence Length = 224108 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 gatgaggcagtccccctgctcg 367 |||||||||||||||||||||| Sbjct: 195592 gatgaggcagtccccctgctcg 195571
>gb|AC160106.2| Mus musculus BAC clone RP24-300H23 from chromosome 13, complete sequence Length = 184364 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 369 acacccacctcaggcacacctg 390 |||||||||||||||||||||| Sbjct: 151594 acacccacctcaggcacacctg 151615
>gb|AC159899.2| Mus musculus BAC clone RP23-114N1 from chromosome 9, complete sequence Length = 198173 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 gatgaggcagtccccctgctcg 367 |||||||||||||||||||||| Sbjct: 180650 gatgaggcagtccccctgctcg 180671
>gb|BC096550.1| Mus musculus zinc finger protein 664, mRNA (cDNA clone IMAGE:30550168), partial cds Length = 3222 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 aacatcttcattcattcactga 29 |||||||||||||||||||||| Sbjct: 1817 aacatcttcattcattcactga 1838
>gb|BC027820.1| Mus musculus zinc finger protein 664, mRNA (cDNA clone IMAGE:5320514), containing frame-shift errors Length = 1842 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 aacatcttcattcattcactga 29 |||||||||||||||||||||| Sbjct: 474 aacatcttcattcattcactga 495
>ref|NM_194590.1| Oryza sativa (japonica cultivar-group) putative NADPH-dependent oxidoreductase (OSJNBa0092N12.13), mRNA Length = 1029 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctg 390 ||||||||||||||| | ||| || || ||||| | || |||||||||||| ||||| Sbjct: 837 gaagctcttgacgattatgcaatcgccttgctcatgcagccacctcaggcatacctg 781
>ref|NM_194589.1| Oryza sativa (japonica cultivar-group) putative NADPH-dependent oxidoreductase (OSJNBa0092N12.14), mRNA Length = 435 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctg 390 ||||||||||||||| | || || || ||||| ||||||||||||| ||| ||||| Sbjct: 237 gaagctcttgacgattacacaatctccttgctcatacacccacctcaagcatacctg 181
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 414 cggcgatgtcctgcaggacgccggc 438 ||||||||||||||| ||||||||| Sbjct: 1177828 cggcgatgtcctgcaagacgccggc 1177804
>emb|BX936451.13| Zebrafish DNA sequence from clone CH211-201F1 in linkage group 21, complete sequence Length = 169828 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 gcagaactccctcagcttcctctgc 544 ||||||| ||||||||||||||||| Sbjct: 93307 gcagaacaccctcagcttcctctgc 93331
>emb|CR735102.8| Zebrafish DNA sequence from clone DKEYP-8H9 in linkage group 21, complete sequence Length = 118807 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 gcagaactccctcagcttcctctgc 544 ||||||| ||||||||||||||||| Sbjct: 44331 gcagaacaccctcagcttcctctgc 44355
>dbj|AK105538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-H06, full insert sequence Length = 1693 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 cgtccatcacggcgtcgctgc 458 ||||||||||||||||||||| Sbjct: 883 cgtccatcacggcgtcgctgc 903
>dbj|AK105090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-B12, full insert sequence Length = 1306 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctg 390 ||||||||||||||| | || || || ||||| ||||||||||||| ||| ||||| Sbjct: 858 gaagctcttgacgattacacaatctccttgctcatacacccacctcaagcatacctg 802
>dbj|AK068411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151D08, full insert sequence Length = 1175 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctg 390 ||||||||||||||| | || || || ||||| ||||||||||||| ||| ||||| Sbjct: 838 gaagctcttgacgattacacaatctccttgctcatacacccacctcaagcatacctg 782
>dbj|AK063329.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H10, full insert sequence Length = 1253 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 334 gaagctcttgacgatgaggcagtccccctgctcgtacacccacctcaggcacacctg 390 ||||||||||||||| | ||| || || ||||| | || |||||||||||| ||||| Sbjct: 920 gaagctcttgacgattatgcaatcgccttgctcatgcagccacctcaggcatacctg 864
>ref|NM_190596.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tcgccgtcccagagctcctc 189 |||||||||||||||||||| Sbjct: 929 tcgccgtcccagagctcctc 910
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 256 ctcggcgatcctgcggcgctcctcctcc 283 |||||||||| |||||||||||||||| Sbjct: 145245 ctcggcgatctggcggcgctcctcctcc 145272
>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02 map C8, complete sequence Length = 116304 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 cgtcgaagctcttgacgatgaggc 353 |||||||||| ||||||||||||| Sbjct: 3248 cgtcgaagctgttgacgatgaggc 3271
>ref|XM_592463.2| PREDICTED: Bos taurus similar to 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase-like 4 (Phosphoinositide phospholipase C-like 4) (Phospholipase C-like 4) (LOC514590), mRNA Length = 4907 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tcctgcggcgctcctcctcc 283 |||||||||||||||||||| Sbjct: 4181 tcctgcggcgctcctcctcc 4200
>ref|XM_984002.1| PREDICTED: Mus musculus zinc finger protein 292 (Zfp292), mRNA Length = 9984 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cagccatccatggccgagga 115 |||||||||||||||||||| Sbjct: 5989 cagccatccatggccgagga 6008
>ref|XM_909747.2| PREDICTED: Mus musculus zinc finger protein 292, transcript variant 4 (Zfp292), mRNA Length = 10211 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cagccatccatggccgagga 115 |||||||||||||||||||| Sbjct: 6217 cagccatccatggccgagga 6236
>ref|XM_620009.3| PREDICTED: Mus musculus zinc finger protein 292, transcript variant 2 (Zfp292), mRNA Length = 9988 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cagccatccatggccgagga 115 |||||||||||||||||||| Sbjct: 5993 cagccatccatggccgagga 6012
>gb|BC064316.1| Mus musculus cDNA clone IMAGE:5012170 Length = 1481 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cagccatccatggccgagga 115 |||||||||||||||||||| Sbjct: 487 cagccatccatggccgagga 506
>gb|AC129592.5| Mus musculus BAC clone RP24-86A6 from chromosome 3, complete sequence Length = 186218 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tattgatttattccaaggga 66 |||||||||||||||||||| Sbjct: 104699 tattgatttattccaaggga 104680
>ref|XM_815118.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L28 (Tc00.1047053506297.270) partial mRNA Length = 441 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 acgccggcgtccatcacggc 450 |||||||||||||||||||| Sbjct: 257 acgccggcgtccatcacggc 238
>ref|XM_546733.2| PREDICTED: Canis familiaris similar to 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase-like 4 (Phosphoinositide phospholipase C-like 4) (Phospholipase C-like 4) (LOC489613), mRNA Length = 4164 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tcctgcggcgctcctcctcc 283 |||||||||||||||||||| Sbjct: 3935 tcctgcggcgctcctcctcc 3954
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cgaggttgatcttgcgctgc 250 |||||||||||||||||||| Sbjct: 2786197 cgaggttgatcttgcgctgc 2786178
>ref|NM_001016776.2| Xenopus tropicalis DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 (ddx18), mRNA Length = 2122 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 actccctcagcttcctctgc 544 |||||||||||||||||||| Sbjct: 224 actccctcagcttcctctgc 205
>gb|AC099325.4| Oryza sativa chromosome 10 BAC OSJNBb0048O22 genomic sequence, complete sequence Length = 134825 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 cgtcgaagctcttgacgatgaggc 353 |||||||||| ||||||||||||| Sbjct: 20168 cgtcgaagctgttgacgatgaggc 20145
>gb|BC008537.1| Mus musculus zinc finger protein 292, mRNA (cDNA clone IMAGE:3493868), partial cds Length = 4339 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cagccatccatggccgagga 115 |||||||||||||||||||| Sbjct: 2070 cagccatccatggccgagga 2089
>gb|AF012100.2|AF012100 Pseudomonas aeruginosa PtxR (ptxR) and PtxS (ptxS) genes, complete cds and ketogluconate utilization operon gene, complete sequence Length = 7447 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gatctcggcgatcctgcggcgctc 276 ||||||||||||| |||||||||| Sbjct: 4568 gatctcggcgatcatgcggcgctc 4545
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gctcctcctccgtgagctcc 292 |||||||||||||||||||| Sbjct: 1494796 gctcctcctccgtgagctcc 1494815 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gctcctcctccgtgagctcc 292 |||||||||||||||||||| Sbjct: 1361917 gctcctcctccgtgagctcc 1361936
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tcgccgtcccagagctcctc 189 |||||||||||||||||||| Sbjct: 36400391 tcgccgtcccagagctcctc 36400372
>dbj|AB221608.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis, dev_stage=adult, strain=C57BL/6J), clone:V01X017A17 Length = 2496 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cagccatccatggccgagga 115 |||||||||||||||||||| Sbjct: 2395 cagccatccatggccgagga 2414
>dbj|AB221605.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis, dev_stage=adult, strain=C57BL/6J), clone:V01X015O01 Length = 2349 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cagccatccatggccgagga 115 |||||||||||||||||||| Sbjct: 205 cagccatccatggccgagga 224
>gb|AC069070.19| Homo sapiens 3 BAC RP11-575H20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154828 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttgatttattccaagggaaa 68 |||||||||||||||||||| Sbjct: 38475 ttgatttattccaagggaaa 38494
>gb|AE004652.1| Pseudomonas aeruginosa PAO1, section 213 of 529 of the complete genome Length = 11558 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gatctcggcgatcctgcggcgctc 276 ||||||||||||| |||||||||| Sbjct: 1393 gatctcggcgatcatgcggcgctc 1370
>gb|AE004514.1| Pseudomonas aeruginosa PAO1, section 75 of 529 of the complete genome Length = 10522 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 cggcgatgtcctgcaggacg 433 |||||||||||||||||||| Sbjct: 5078 cggcgatgtcctgcaggacg 5097
>gb|AC125605.4| Homo sapiens 12 BAC RP11-251H8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 45834 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 agaactccctcagcttcctc 541 |||||||||||||||||||| Sbjct: 30337 agaactccctcagcttcctc 30356
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 tcgccgtcccagagctcctc 189 |||||||||||||||||||| Sbjct: 52230 tcgccgtcccagagctcctc 52211
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 263 atcctgcggcgctcctcctccgtgagctccca 294 |||||||||||||| |||| ||| |||||||| Sbjct: 8090451 atcctgcggcgctcttcctgcgtcagctccca 8090420
>emb|BX465850.12| Mouse DNA sequence from clone RP24-349L5 on chromosome 4, complete sequence Length = 59975 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cagccatccatggccgagga 115 |||||||||||||||||||| Sbjct: 16039 cagccatccatggccgagga 16020
>gb|AE005005.1| Halobacterium sp. NRC-1 section 36 of 170 of the complete genome Length = 10570 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cgtccacgtccaggttctcc 316 |||||||||||||||||||| Sbjct: 7739 cgtccacgtccaggttctcc 7758
>dbj|AP004254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1126_D10 Length = 90631 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gctcctcctccgtgagctcc 292 |||||||||||||||||||| Sbjct: 54274 gctcctcctccgtgagctcc 54293
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1163_G08 Length = 150676 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gctcctcctccgtgagctcc 292 |||||||||||||||||||| Sbjct: 22284 gctcctcctccgtgagctcc 22303
>dbj|AP004166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1499_A07 Length = 132146 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gctcctcctccgtgagctcc 292 |||||||||||||||||||| Sbjct: 104701 gctcctcctccgtgagctcc 104720
>ref|XM_320594.2| Anopheles gambiae str. PEST ENSANGP00000015352 (ENSANGG00000012863), partial mRNA Length = 1503 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 gcgtccatcacggcgtcgct 456 |||||||||||||||||||| Sbjct: 874 gcgtccatcacggcgtcgct 893
>ref|XM_320595.2| Anopheles gambiae str. PEST ENSANGP00000024392 (ENSANGG00000012863), partial mRNA Length = 1521 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 gcgtccatcacggcgtcgct 456 |||||||||||||||||||| Sbjct: 892 gcgtccatcacggcgtcgct 911
>ref|XM_320596.2| Anopheles gambiae str. PEST ENSANGP00000022426 (ENSANGG00000012863), partial mRNA Length = 1638 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 gcgtccatcacggcgtcgct 456 |||||||||||||||||||| Sbjct: 1009 gcgtccatcacggcgtcgct 1028
>gb|AF017806.1|AF017806 Mus musculus Zn-15 transcription factor (Zfp-15) mRNA, complete cds Length = 6706 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cagccatccatggccgagga 115 |||||||||||||||||||| Sbjct: 4452 cagccatccatggccgagga 4471
>gb|AF100432.1|AF100432 Picea abies clone PA7B9 repetitive DNA sequence Length = 245 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 attgatttattccaagggaa 67 |||||||||||||||||||| Sbjct: 244 attgatttattccaagggaa 225
>emb|CR855719.2| Xenopus tropicalis finished cDNA, clone TGas108f21 Length = 2122 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 actccctcagcttcctctgc 544 |||||||||||||||||||| Sbjct: 224 actccctcagcttcctctgc 205
>dbj|AB093243.1| Mus musculus mRNA for mKIAA0530 protein Length = 5808 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cagccatccatggccgagga 115 |||||||||||||||||||| Sbjct: 3554 cagccatccatggccgagga 3573
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tcggcgatcctgcggcgctcctcc 280 |||||||||| ||||||||||||| Sbjct: 2087764 tcggcgatccggcggcgctcctcc 2087787
>gb|AC140358.2| Mus musculus BAC clone RP24-234L7 from 3, complete sequence Length = 160295 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tattgatttattccaaggga 66 |||||||||||||||||||| Sbjct: 157401 tattgatttattccaaggga 157382
>emb|AL672182.18| Mouse DNA sequence from clone RP23-293I3 on chromosome 11, complete sequence Length = 211363 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ctccctcagcttcctctgct 545 |||||||||||||||||||| Sbjct: 102960 ctccctcagcttcctctgct 102941
>dbj|AB003067.1| Trypanosoma cruzi clone TcCE5-7-2 mRNA for ribosomal protein L28, complete cds Length = 541 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 acgccggcgtccatcacggc 450 |||||||||||||||||||| Sbjct: 262 acgccggcgtccatcacggc 243 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,065,507 Number of Sequences: 3902068 Number of extensions: 4065507 Number of successful extensions: 95744 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94833 Number of HSP's gapped (non-prelim): 911 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)