ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart53h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474420.1| Oryza sativa (japonica cultivar-group), predic... 54 3e-04
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
3dbj|AK103610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
4dbj|AK069353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
5dbj|AK061257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
6emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 54 3e-04
7emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 54 3e-04
8emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 54 3e-04
9ref|XM_479660.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.005
10ref|XM_507421.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.005
11ref|XM_507420.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.005
12ref|XM_507419.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.005
13ref|XM_507418.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.005
14ref|XM_507417.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.005
15ref|XM_506616.2| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.005
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
17dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
18dbj|AK104488.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
19dbj|AK099239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
20dbj|AK072003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
21dbj|AK067526.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
22dbj|AK061780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
23dbj|AK061546.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
24dbj|AK061430.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
25emb|AL592444.18| Human DNA sequence from clone RP11-178P20 on ch... 44 0.29
26emb|AL353747.18| Human DNA sequence from clone RP11-568A7 on chr... 44 0.29
27gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.2
28gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.2
29gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, co... 42 1.2
30emb|AL109654.22|HSG278N14 Human DNA sequence from clone GS1-278N... 42 1.2
31emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 1.2
32gb|AC155648.14| Mus musculus 6 BAC RP24-88B16 (Roswell Park Canc... 42 1.2
33emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.2
34gb|AC092909.6| Homo sapiens 3q BAC RP11-620O17 (Roswell Park Can... 42 1.2
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
36gb|AC156397.5| Mus musculus 6 BAC RP24-279P24 (Roswell Park Canc... 42 1.2
37dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
38emb|CT737236.2| Pan troglodytes chromosome X clone CH251-15O05 m... 42 1.2
39gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 4.6
40gb|AC004111.1| Homo sapiens BAC clone CTB-103H13 from 7, complet... 40 4.6
41gb|AC110918.9| Mus musculus chromosome 5, clone RP23-189P23, com... 40 4.6
42gb|AC110557.10| Mus musculus chromosome 5, clone RP23-250P16, co... 40 4.6
43emb|X55763.1|OCCACBRE Rabbit mRNA for smooth muscle calcium chan... 40 4.6
44emb|X15539.1|OCCACHAN Rabbit mRNA for cardiac dihydropyridine-se... 40 4.6
45emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.6
46dbj|AB204912.1| Photobacterium damselae subsp. piscicida gyrA ge... 40 4.6
47gb|AC092668.2| Homo sapiens BAC clone RP11-553F8 from 4, complet... 40 4.6
48dbj|AK163558.1| Mus musculus adult male corpora quadrigemina cDN... 40 4.6
49dbj|AK163516.1| Mus musculus adult male corpora quadrigemina cDN... 40 4.6
50gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome... 40 4.6
51gb|AF199511.1|AF199511 Oryctolagus cuniculus calcium channel mRN... 40 4.6 
>ref|XM_474420.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 663

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 238 tcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggccgccgccggttgtg 297
           ||||||||||| || || || |||||||||||||||||| |   ||||||||||    ||
Sbjct: 656 tcgacggcgcatgcagctgcttgctggaagcggaagtagccatcgccgccgccgtagttg 597

                                                             
Query: 298 gcgccgtanctgccctttccctcgttcaccctgatgagggccgggcagtt 347
            ||||||| |||||||| || ||||| ||  ||| |||||| ||||||||
Sbjct: 596 acgccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagtt 547
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                            
Query: 238      tcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggccgccgccggttgtg 297
                ||||||||||| || || || |||||||||||||||||| |   ||||||||||    ||
Sbjct: 35046495 tcgacggcgcatgcagctgcttgctggaagcggaagtagccatcgccgccgccgtagttg 35046554

                                                                  
Query: 298      gcgccgtanctgccctttccctcgttcaccctgatgagggccgggcagtt 347
                 ||||||| |||||||| || ||||| ||  ||| |||||| ||||||||
Sbjct: 35046555 acgccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagtt 35046604
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>dbj|AK103610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133J15, full
            insert sequence
          Length = 1420

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 238  tcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggccgccgccggttgtg 297
            ||||||||||| || || || |||||||||||||||||| |   ||||||||||    ||
Sbjct: 1069 tcgacggcgcatgcagctgcttgctggaagcggaagtagccatcgccgccgccgtagttg 1010

                                                              
Query: 298  gcgccgtanctgccctttccctcgttcaccctgatgagggccgggcagtt 347
             ||||||| |||||||| || ||||| ||  ||| |||||| ||||||||
Sbjct: 1009 acgccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagtt 960
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>dbj|AK069353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014D16, full
           insert sequence
          Length = 1024

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 238 tcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggccgccgccggttgtg 297
           ||||||||||| || || || |||||||||||||||||| |   ||||||||||    ||
Sbjct: 692 tcgacggcgcatgcagctgcttgctggaagcggaagtagccatcgccgccgccgtagttg 633

                                                             
Query: 298 gcgccgtanctgccctttccctcgttcaccctgatgagggccgggcagtt 347
            ||||||| |||||||| || ||||| ||  ||| |||||| ||||||||
Sbjct: 632 acgccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagtt 583
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>dbj|AK061257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B04, full
           insert sequence
          Length = 1027

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 238 tcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggccgccgccggttgtg 297
           ||||||||||| || || || |||||||||||||||||| |   ||||||||||    ||
Sbjct: 695 tcgacggcgcatgcagctgcttgctggaagcggaagtagccatcgccgccgccgtagttg 636

                                                             
Query: 298 gcgccgtanctgccctttccctcgttcaccctgatgagggccgggcagtt 347
            ||||||| |||||||| || ||||| ||  ||| |||||| ||||||||
Sbjct: 635 acgccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagtt 586
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>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete
            sequence
          Length = 112897

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                        
Query: 238  tcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggccgccgccggttgtg 297
            ||||||||||| || || || |||||||||||||||||| |   ||||||||||    ||
Sbjct: 1163 tcgacggcgcatgcagctgcttgctggaagcggaagtagccatcgccgccgccgtagttg 1222

                                                              
Query: 298  gcgccgtanctgccctttccctcgttcaccctgatgagggccgggcagtt 347
             ||||||| |||||||| || ||||| ||  ||| |||||| ||||||||
Sbjct: 1223 acgccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagtt 1272
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>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                         
Query: 238   tcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggccgccgccggttgtg 297
             ||||||||||| || || || |||||||||||||||||| |   ||||||||||    ||
Sbjct: 78163 tcgacggcgcatgcagctgcttgctggaagcggaagtagccatcgccgccgccgtagttg 78222

                                                               
Query: 298   gcgccgtanctgccctttccctcgttcaccctgatgagggccgggcagtt 347
              ||||||| |||||||| || ||||| ||  ||| |||||| ||||||||
Sbjct: 78223 acgccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagtt 78272
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>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
              complete sequence
          Length = 145391

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                          
Query: 238    tcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggccgccgccggttgtg 297
              ||||||||||| || || || |||||||||||||||||| |   ||||||||||    ||
Sbjct: 105542 tcgacggcgcatgcagctgcttgctggaagcggaagtagccatcgccgccgccgtagttg 105601

                                                                
Query: 298    gcgccgtanctgccctttccctcgttcaccctgatgagggccgggcagtt 347
               ||||||| |||||||| || ||||| ||  ||| |||||| ||||||||
Sbjct: 105602 acgccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagtt 105651
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>ref|XM_479660.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1046

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 794 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 735

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 734 cgccgccgg 726
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>ref|XM_507421.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA
          Length = 1218

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 790 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 731

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 730 cgccgccgg 722
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>ref|XM_507420.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA
          Length = 1386

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 958 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 899

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 898 cgccgccgg 890
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>ref|XM_507419.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA
          Length = 1520

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 224  ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
            |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 1036 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 977

                     
Query: 284  cgccgccgg 292
            |||||||||
Sbjct: 976  cgccgccgg 968
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>ref|XM_507418.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA
          Length = 1211

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 701 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 642

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 641 cgccgccgg 633
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>ref|XM_507417.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA
          Length = 1323

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 813 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 754

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 753 cgccgccgg 745
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>ref|XM_506616.2| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA
          Length = 1445

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 935 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 876

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 875 cgccgccgg 867
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                          
Query: 224    ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
              |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 146071 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 146130

                       
Query: 284    cgccgccgg 292
              |||||||||
Sbjct: 146131 cgccgccgg 146139
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>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0015C07
          Length = 149079

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                         
Query: 224   ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
             |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 61406 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 61465

                      
Query: 284   cgccgccgg 292
             |||||||||
Sbjct: 61466 cgccgccgg 61474
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>dbj|AK104488.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B05, full
           insert sequence
          Length = 1219

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 790 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 731

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 730 cgccgccgg 722
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>dbj|AK099239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B02, full
           insert sequence
          Length = 1386

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 958 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 899

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 898 cgccgccgg 890
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>dbj|AK072003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H23, full
           insert sequence
          Length = 1445

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 935 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 876

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 875 cgccgccgg 867
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>dbj|AK067526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109O20, full
            insert sequence
          Length = 1520

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 224  ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
            |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 1036 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 977

                     
Query: 284  cgccgccgg 292
            |||||||||
Sbjct: 976  cgccgccgg 968
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>dbj|AK061780.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D12, full
           insert sequence
          Length = 1323

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 813 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 754

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 753 cgccgccgg 745
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>dbj|AK061546.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A05, full
           insert sequence
          Length = 1211

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 701 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 642

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 641 cgccgccgg 633
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>dbj|AK061430.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H04, full
           insert sequence
          Length = 1046

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ggatcgatcaaatgtcgacggcgcaggcggcggcctgctggaagcggaagtagtcggggc 283
           |||| ||||| | ||||||| |||||||||||||  ||||||| | ||||||| ||  ||
Sbjct: 794 ggatggatcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgttgc 735

                    
Query: 284 cgccgccgg 292
           |||||||||
Sbjct: 734 cgccgccgg 726
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>emb|AL592444.18| Human DNA sequence from clone RP11-178P20 on chromosome 6 Contains the
             5' end of the TCP10 gene for t-complex 10 (mouse) and a
             CpG island, complete sequence
          Length = 74279

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 68    ccccaaaaggaagaggaagaaa 89
             ||||||||||||||||||||||
Sbjct: 49412 ccccaaaaggaagaggaagaaa 49391
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>emb|AL353747.18| Human DNA sequence from clone RP11-568A7 on chromosome 6 Contains two
             novel genes and a novel pseudogene, complete sequence
          Length = 63554

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 68    ccccaaaaggaagaggaagaaa 89
             ||||||||||||||||||||||
Sbjct: 46882 ccccaaaaggaagaggaagaaa 46861
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 242     cggcgcaggcggcggcctgctggaa 266
               |||||| ||||||||||||||||||
Sbjct: 2619511 cggcgccggcggcggcctgctggaa 2619487
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 242     cggcgcaggcggcggcctgctggaa 266
               |||||| ||||||||||||||||||
Sbjct: 3831849 cggcgccggcggcggcctgctggaa 3831825
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>gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, complete sequence
          Length = 170056

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   tccaaaaccaaaagcaatgaa 161
             |||||||||||||||||||||
Sbjct: 86172 tccaaaaccaaaagcaatgaa 86152
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>emb|AL109654.22|HSG278N14 Human DNA sequence from clone GS1-278N14 on chromosome Xq27.3-28,
             complete sequence
          Length = 182150

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 152   aagcaatgaatttcttgtctg 172
             |||||||||||||||||||||
Sbjct: 74953 aagcaatgaatttcttgtctg 74973
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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 72      aaaaggaagaggaagaaacta 92
               |||||||||||||||||||||
Sbjct: 2234078 aaaaggaagaggaagaaacta 2234098
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>gb|AC155648.14| Mus musculus 6 BAC RP24-88B16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 199446

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 11     tgctttcttttctttaaccag 31
              |||||||||||||||||||||
Sbjct: 162464 tgctttcttttctttaaccag 162484
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 242     cggcgcaggcggcggcctgctggaa 266
               |||||| ||||||||||||||||||
Sbjct: 3572196 cggcgccggcggcggcctgctggaa 3572172
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>gb|AC092909.6| Homo sapiens 3q BAC RP11-620O17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 165589

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     ttcatgctttcttttctttaa 27
             |||||||||||||||||||||
Sbjct: 68138 ttcatgctttcttttctttaa 68158
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 237     gtcgacggcgcaggcggcggc 257
               |||||||||||||||||||||
Sbjct: 9562134 gtcgacggcgcaggcggcggc 9562114
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>gb|AC156397.5| Mus musculus 6 BAC RP24-279P24 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 166910

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     tgctttcttttctttaaccag 31
              |||||||||||||||||||||
Sbjct: 135713 tgctttcttttctttaaccag 135693
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>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0693E08
          Length = 157969

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 237   gtcgacggcgcaggcggcggc 257
             |||||||||||||||||||||
Sbjct: 26352 gtcgacggcgcaggcggcggc 26332
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>emb|CT737236.2| Pan troglodytes chromosome X clone CH251-15O05 map Xq28, complete
             sequence
          Length = 185887

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 152   aagcaatgaatttcttgtctg 172
             |||||||||||||||||||||
Sbjct: 97844 aagcaatgaatttcttgtctg 97864
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 212     tcgagccgaaccggatcgat 231
               ||||||||||||||||||||
Sbjct: 1444764 tcgagccgaaccggatcgat 1444783
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>gb|AC004111.1| Homo sapiens BAC clone CTB-103H13 from 7, complete sequence
          Length = 106172

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    cccaaaaggaagaggaagaa 88
             ||||||||||||||||||||
Sbjct: 85789 cccaaaaggaagaggaagaa 85808
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>gb|AC110918.9| Mus musculus chromosome 5, clone RP23-189P23, complete sequence
          Length = 267946

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     attcatgctttcttttcttt 25
             ||||||||||||||||||||
Sbjct: 58561 attcatgctttcttttcttt 58580
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>gb|AC110557.10| Mus musculus chromosome 5, clone RP23-250P16, complete sequence
          Length = 221232

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      attcatgctttcttttcttt 25
              ||||||||||||||||||||
Sbjct: 114463 attcatgctttcttttcttt 114482
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>emb|X55763.1|OCCACBRE Rabbit mRNA for smooth muscle calcium channel blocker (CaCB) receptor
          Length = 7374

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   cccaaaaggaagaggaagaa 88
            ||||||||||||||||||||
Sbjct: 2913 cccaaaaggaagaggaagaa 2932
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>emb|X15539.1|OCCACHAN Rabbit mRNA for cardiac dihydropyridine-sensitive calcium channel
            protein
          Length = 7036

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   cccaaaaggaagaggaagaa 88
            ||||||||||||||||||||
Sbjct: 2575 cccaaaaggaagaggaagaa 2594
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 212     tcgagccgaaccggatcgat 231
               ||||||||||||||||||||
Sbjct: 2755689 tcgagccgaaccggatcgat 2755708
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>dbj|AB204912.1| Photobacterium damselae subsp. piscicida gyrA gene for DNA gyrase
           subunit A, complete cds
          Length = 2625

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  ctttcttttctttaaccagt 32
           ||||||||||||||||||||
Sbjct: 856 ctttcttttctttaaccagt 837
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>gb|AC092668.2| Homo sapiens BAC clone RP11-553F8 from 4, complete sequence
          Length = 167570

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     ccaaaaggaagaggaagaaa 89
              ||||||||||||||||||||
Sbjct: 117431 ccaaaaggaagaggaagaaa 117450
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>dbj|AK163558.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230371C07
           product:exportin 4, full insert sequence
          Length = 1766

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  aaaggaagaggaagaaacta 92
           ||||||||||||||||||||
Sbjct: 865 aaaggaagaggaagaaacta 884
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>dbj|AK163516.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230331C12
           product:exportin 4, full insert sequence
          Length = 1896

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  aaaggaagaggaagaaacta 92
           ||||||||||||||||||||
Sbjct: 979 aaaggaagaggaagaaacta 998
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>gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome 14, complete sequence
          Length = 234665

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     aaaggaagaggaagaaacta 92
              ||||||||||||||||||||
Sbjct: 147295 aaaggaagaggaagaaacta 147314
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>gb|AF199511.1|AF199511 Oryctolagus cuniculus calcium channel mRNA, partial cds
          Length = 2730

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 cccaaaaggaagaggaagaa 88
          ||||||||||||||||||||
Sbjct: 13 cccaaaaggaagaggaagaa 32


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,846,609
Number of Sequences: 3902068
Number of extensions: 3846609
Number of successful extensions: 102354
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101942
Number of HSP's gapped (non-prelim): 412
length of query: 347
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 325
effective length of database: 17,147,199,772
effective search space: 5572839925900
effective search space used: 5572839925900
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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