ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart53h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 77 2e-14
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 52 3e-07
3CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 43 2e-04
4CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 39 0.004
5CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 38 0.008
6CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 37 0.014
7CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 37 0.018
8CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 36 0.023
9XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 35 0.040
10CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 33 0.26
11CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 32 0.34
12CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 30 1.3
13CONB_CANEN (P49347) Concanavalin B precursor (Con B) 30 1.3

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 34/35 (97%), Positives = 35/35 (100%)
 Frame = -2

Query: 232 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 128
           VAPV+QKKDNYGGIMLWDRYFDKQTNYSSLIKYYA
Sbjct: 270 VAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 304



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = -2

Query: 226 PVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 128
           P  QK  NYGGIMLWDR++DKQT Y   +KY+A
Sbjct: 272 PNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = -2

Query: 232 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137
           + PV ++   YGG+MLW +Y+D Q+ YSS IK
Sbjct: 267 ILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIK 298



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -2

Query: 232 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137
           V P  +    YGG+M+WDR+ D Q+ YS+ IK
Sbjct: 259 VLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIK 290



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -2

Query: 232 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137
           V P  +    YGG+MLW+R FD Q  YSS I+
Sbjct: 260 VLPFLKGSSKYGGVMLWNRKFDVQCGYSSAIR 291



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 232 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 140
           V P  +    YGG+MLWDR+ D Q+ YS  I
Sbjct: 264 VLPTIKGSSKYGGVMLWDRFNDGQSGYSGAI 294



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 232 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 140
           + P  +K   YGG+MLW +++D +  YSS I
Sbjct: 265 ILPEIKKSPKYGGVMLWSKFYDDKNGYSSSI 295



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 232 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 140
           + P  +K   YGG+MLW +++D +  YSS I
Sbjct: 268 ILPTLKKSRKYGGVMLWSKFWDDKNGYSSSI 298



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = -2

Query: 205 NYGGIMLWDRYFDKQTNYS 149
           NYGG+ ++DRYFDK+ NY+
Sbjct: 269 NYGGLAIYDRYFDKKANYT 287



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>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 232 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137
           V P  +   NYGG+MLW + FD    YS  IK
Sbjct: 259 VLPTIKASSNYGGVMLWSKAFD--NGYSDSIK 288



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>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 232 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137
           V P+      YGG+MLW +++D    YSS IK
Sbjct: 259 VLPLINGSPKYGGVMLWSKFYD--NGYSSAIK 288



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>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 232 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 137
           V P  +    YGG+MLW + +D  + YSS IK
Sbjct: 261 VLPTIKGSAKYGGVMLWSKAYD--SGYSSAIK 290



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = -2

Query: 202 YGGIMLWDRYFDKQTNYS-SLIKY 134
           Y GI LW+R  DK+T YS ++I+Y
Sbjct: 284 YAGIALWNRQADKETGYSTNIIRY 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,929,162
Number of Sequences: 219361
Number of extensions: 321128
Number of successful extensions: 627
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 80,573,946
effective HSP length: 54
effective length of database: 68,728,452
effective search space used: 1649482848
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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