>gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA, complete cds
          Length = 1142

 Score =  174 bits (88), Expect = 1e-40
 Identities = 155/176 (88%), Gaps = 6/176 (3%)
 Strand = Plus / Minus

                                                                        
Query: 111  cttaaatagatcaccttgcggtgtttccacaacacaaggctacactaacaatgatcaaaa 170
            |||||||| ||||||||||| ||||| |||||| |||||| |||||||||||||||||||
Sbjct: 1065 cttaaataaatcaccttgcgatgttttcacaacgcaaggccacactaacaatgatcaaaa 1006

                                                                        
Query: 171  tgctcagcttcacaatga----taacttatttatctctacgataatgtcctactagcatg 226
            |||||| || |||||| |    |||||||||||| |||||  || ||| ||||||| |||
Sbjct: 1005 tgctcaactccacaataagtaataacttatttatgtctac--tactgtgctactagtatg 948

                                                                    
Query: 227  agagaaggaaaggcctaagcgggtgctgatcagcagcagcctcaaaatagccgaag 282
            |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 947  agagaagggaaggcctaagcgggtgctgatcagcagcagcctcggaatagccgaag 892



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 41   gcaacaagagaagttacaagatactctcacacaccac 77
            ||||||| ||||||||||||| |||||||||||||||
Sbjct: 1129 gcaacaacagaagttacaagacactctcacacaccac 1093

>gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, complete cds
          Length = 1106

 Score =  167 bits (84), Expect = 2e-38
 Identities = 154/176 (87%), Gaps = 6/176 (3%)
 Strand = Plus / Minus

                                                                        
Query: 111  cttaaatagatcaccttgcggtgtttccacaacacaaggctacactaacaatgatcaaaa 170
            |||||||| ||||||||||| ||||| |||||| |||||| |||||||||||||||||||
Sbjct: 1068 cttaaataaatcaccttgcgatgttttcacaacgcaaggccacactaacaatgatcaaaa 1009

                                                                        
Query: 171  tgctcagcttcacaatga----taacttatttatctctacgataatgtcctactagcatg 226
            ||| || || |||||| |    |||||||||||| |||||  || ||| ||||||| |||
Sbjct: 1008 tgcacaactccacaataagtaataacttatttatgtctac--tactgtgctactagtatg 951

                                                                    
Query: 227  agagaaggaaaggcctaagcgggtgctgatcagcagcagcctcaaaatagccgaag 282
            |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 950  agagaagggaaggcctaagcgggtgctgatcagcagcagcctcggaatagccgaag 895

>emb|AJ276007.1|FPR276007 Festuca pratensis partial mRNA for expansin (exp2 gene)
          Length = 1248

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 225 tgagagaaggaaaggcctaagcgggtgctgatcagcagcagcctcaaaatagccgaag 282
           |||||||||| |||||| |||||||||||||||||||||| ||||  |||||||||||
Sbjct: 998 tgagagaagggaaggcccaagcgggtgctgatcagcagcaacctcggaatagccgaag 941



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 33   gttacaacgcaacaagagaagttacaagatactctcacacaccac 77
            ||||||||| ||||| | ||||||||||| |||| ||||||||||
Sbjct: 1174 gttacaacgtaacaacaaaagttacaagaaactcacacacaccac 1130

>gb|AF332169.1| Zea mays alpha-expansin (expA1) mRNA, complete cds
          Length = 1090

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 227 agagaaggaaaggcctaagcgggtgct 253
           ||||||||||| |||||||||||||||
Sbjct: 956 agagaaggaaatgcctaagcgggtgct 930

>gb|AY104146.1| Zea mays PCO064861 mRNA sequence
          Length = 1106

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 227 agagaaggaaaggcctaagcgggtgct 253
           ||||||||||| |||||||||||||||
Sbjct: 973 agagaaggaaatgcctaagcgggtgct 947

>dbj|AB022221.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSD23
          Length = 33479

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 93    tgtattactaaaagtacactta 114
             ||||||||||||||||||||||
Sbjct: 30769 tgtattactaaaagtacactta 30748

>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence
          Length = 191241

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 62     tactctcacacaccacacacca 83
              ||||||||||||||||||||||
Sbjct: 108235 tactctcacacaccacacacca 108214

>emb|Z69791.1|CEF39D8 Caenorhabditis elegans Cosmid F39D8, complete sequence
          Length = 25523

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 249  gtgctgatcagcagcagcctcaaaa 273
            ||||||||||||||||||| |||||
Sbjct: 7247 gtgctgatcagcagcagccacaaaa 7223

>emb|AL008718.23|HS268H5 Human DNA sequence from clone CTA-268H5 on chromosome 22q13.2-13.3,
              complete sequence
          Length = 188833

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     actctcacacaccacacacca 83
              |||||||||||||||||||||
Sbjct: 113585 actctcacacaccacacacca 113565



 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     actctcacacaccacacacca 83
              |||||||||||||||||||||
Sbjct: 113445 actctcacacaccacacacca 113425

>ref|NM_078144.2| Caenorhabditis elegans Prion-like-(Q/N-rich)-domain-bearing protein
            family member (pqn-36) (pqn-36) mRNA, complete cds
          Length = 3032

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 249  gtgctgatcagcagcagcctcaaaa 273
            ||||||||||||||||||| |||||
Sbjct: 2944 gtgctgatcagcagcagccacaaaa 2968

>ref|NM_078146.2| Caenorhabditis elegans Prion-like-(Q/N-rich)-domain-bearing protein
            family member (pqn-36) (pqn-36) mRNA, complete cds
          Length = 2940

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 249  gtgctgatcagcagcagcctcaaaa 273
            ||||||||||||||||||| |||||
Sbjct: 2687 gtgctgatcagcagcagccacaaaa 2711

>ref|NM_078145.2| Caenorhabditis elegans Prion-like-(Q/N-rich)-domain-bearing protein
            family member (pqn-36) (pqn-36) mRNA, complete cds
          Length = 3241

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 249  gtgctgatcagcagcagcctcaaaa 273
            ||||||||||||||||||| |||||
Sbjct: 2986 gtgctgatcagcagcagccacaaaa 3010

>gb|AC147331.3| Pan troglodytes BAC clone RP43-10H17 from 7, complete sequence
          Length = 189220

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 175    cagcttcacaatgataacttattt 198
              |||||||||||| |||||||||||
Sbjct: 185625 cagcttcacaataataacttattt 185602

>gb|AC166368.3| Mus musculus BAC clone RP23-63I1 from chromosome 7, complete sequence
          Length = 242362

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    gtgtttccacaacacaaggc 150
              ||||||||||||||||||||
Sbjct: 235847 gtgtttccacaacacaaggc 235828



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gtgtttccacaacacaaggc 150
              ||||||||||||||||||||
Sbjct: 153446 gtgtttccacaacacaaggc 153465



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gtgtttccacaacacaaggc 150
             ||||||||||||||||||||
Sbjct: 75869 gtgtttccacaacacaaggc 75850

>gb|AC006043.1| Homo sapiens BAC clone RP11-538D15 from 7, complete sequence
          Length = 189036

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 175   cagcttcacaatgataacttattt 198
             |||||||||||| |||||||||||
Sbjct: 17638 cagcttcacaataataacttattt 17615

>gb|AC141566.4| Mus musculus BAC clone RP23-89G14 from chromosome 7, complete sequence
          Length = 236600

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     ctctcacacaccacacacca 83
              ||||||||||||||||||||
Sbjct: 167327 ctctcacacaccacacacca 167346

>gb|AC126442.4| Mus musculus BAC clone RP23-453M12 from chromosome 7, complete sequence
          Length = 204287

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     ctctcacacaccacacacca 83
              ||||||||||||||||||||
Sbjct: 139261 ctctcacacaccacacacca 139242

>gb|AC155315.6| Mus musculus BAC clone RP23-212F18 from chromosome 7, complete sequence
          Length = 210212

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gtgtttccacaacacaaggc 150
              ||||||||||||||||||||
Sbjct: 142647 gtgtttccacaacacaaggc 142666

>gb|AC142289.1| Pan troglodytes BAC clone RP43-179F19 from 7, complete sequence
          Length = 182617

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 175    cagcttcacaatgataacttattt 198
              |||||||||||| |||||||||||
Sbjct: 154711 cagcttcacaataataacttattt 154734

>emb|AL359831.9| Human DNA sequence from clone RP11-251L4 on chromosome 13, complete
             sequence
          Length = 65321

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    tctcacacaccacacaccat 84
             ||||||||||||||||||||
Sbjct: 32461 tctcacacaccacacaccat 32442

>emb|AL161447.20| Human DNA sequence from clone RP11-379P1 on chromosome 9 Contains the
             3' end of a novel gene (FLJ21613) similar to rat corneal
             wound healing related protein (includes FLJ22634), the
             GOLPH2 gene for golgi phosphoprotein 2 (GP73), a novel
             pseudogene and a CpG island, complete sequence
          Length = 160115

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    cacaccacacaccattccat 89
             ||||||||||||||||||||
Sbjct: 74665 cacaccacacaccattccat 74684

>gb|AC128707.2| Homo sapiens 12 BAC RP11-38F22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 121538

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    tacactaacaatgatcaaaa 170
              ||||||||||||||||||||
Sbjct: 120713 tacactaacaatgatcaaaa 120732

>gb|AC073608.19| Homo sapiens 12 BAC RP11-36P3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 111182

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    tacactaacaatgatcaaaa 170
              ||||||||||||||||||||
Sbjct: 110015 tacactaacaatgatcaaaa 109996

>gb|AC152449.4| Mus musculus BAC clone RP24-560O24 from chromosome 7, complete sequence
          Length = 166134

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gtgtttccacaacacaaggc 150
             ||||||||||||||||||||
Sbjct: 65382 gtgtttccacaacacaaggc 65401

>dbj|AK041833.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630040O03 product:unclassifiable, full
           insert sequence
          Length = 1535

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 cagcagcagcctcaaaatag 276
           ||||||||||||||||||||
Sbjct: 897 cagcagcagcctcaaaatag 878

>gb|AC149278.3| Mus musculus BAC clone RP24-101G17 from 7, complete sequence
          Length = 194766

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    gtgtttccacaacacaaggc 150
              ||||||||||||||||||||
Sbjct: 161693 gtgtttccacaacacaaggc 161674



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gtgtttccacaacacaaggc 150
             ||||||||||||||||||||
Sbjct: 79293 gtgtttccacaacacaaggc 79312



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  gtgtttccacaacacaaggc 150
            ||||||||||||||||||||
Sbjct: 1708 gtgtttccacaacacaaggc 1689

>gb|AF064362.1|AF064362 Herpetomonas samuelpessoai clone her17 kinetoplast minicircle DNA,
           partial sequence
          Length = 641

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  cacaccacacaccattccat 89
           ||||||||||||||||||||
Sbjct: 381 cacaccacacaccattccat 400

>dbj|AP001822.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2336M4, complete
             sequence
          Length = 134278

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tgctgatcagcagcagcctc 269
             ||||||||||||||||||||
Sbjct: 84419 tgctgatcagcagcagcctc 84400

>gb|AC127270.4| Mus musculus BAC clone RP23-453E16 from 12, complete sequence
          Length = 181004

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     cacacaccacacaccattcc 87
              ||||||||||||||||||||
Sbjct: 141400 cacacaccacacaccattcc 141419

>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence
          Length = 225973

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    cagcagcagcctcaaaatag 276
              ||||||||||||||||||||
Sbjct: 113134 cagcagcagcctcaaaatag 113153

>emb|AL669980.9| Mouse DNA sequence from clone RP23-218C2 on chromosome 4, complete
              sequence
          Length = 157624

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     ctctcacacaccacacacca 83
              ||||||||||||||||||||
Sbjct: 155597 ctctcacacaccacacacca 155616

>emb|AL807385.11| Mouse DNA sequence from clone RP23-143B14 on chromosome 4, complete
              sequence
          Length = 221319

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     ctctcacacaccacacacca 83
              ||||||||||||||||||||
Sbjct: 173309 ctctcacacaccacacacca 173290


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,759,123
Number of Sequences: 3902068
Number of extensions: 2759123
Number of successful extensions: 78943
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78859
Number of HSP's gapped (non-prelim): 80
length of query: 282
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 260
effective length of database: 17,147,199,772
effective search space: 4458271940720
effective search space used: 4458271940720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)