>gb|BT009548.1| Triticum aestivum clone wr1.pk151.f8:fis, full insert mRNA sequence
          Length = 779

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 296 ttagatacccttctccagcatcgcgcggacccgggt 331
           |||||| |||||||||||||||||||||||||||||
Sbjct: 554 ttagatgcccttctccagcatcgcgcggacccgggt 519

>gb|AY104216.1| Zea mays PCO109946 mRNA sequence
          Length = 1750

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 298  agatacccttctccagcatcgcgcggacccg 328
            |||||||||||||||||||||| ||||||||
Sbjct: 1538 agatacccttctccagcatcgcccggacccg 1508

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 74      acaaggactgcaccgcagcacca 96
               |||||||||||||||||||||||
Sbjct: 2274114 acaaggactgcaccgcagcacca 2274136

>gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 213379

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 66     gcaatgagacaaggactgcacc 87
              ||||||||||||||||||||||
Sbjct: 114727 gcaatgagacaaggactgcacc 114706

>emb|AL080314.29|HSDJ60O19 Human DNA sequence from clone RP1-60O19 on chromosome 6q16.2-21 Contains
              two novel genes (including FLJ22314), complete sequence
          Length = 161355

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 155    agatgaaacaaaacaaaaactc 176
              ||||||||||||||||||||||
Sbjct: 102739 agatgaaacaaaacaaaaactc 102760

>gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, complete sequence
          Length = 197585

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   agatgaaacaaaacaaaaact 175
             |||||||||||||||||||||
Sbjct: 88277 agatgaaacaaaacaaaaact 88257

>gb|AC122180.9| Mus musculus chromosome 7, clone RP24-296E5, complete sequence
          Length = 167791

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 157   atgaaacaaaacaaaaactcg 177
             |||||||||||||||||||||
Sbjct: 18604 atgaaacaaaacaaaaactcg 18584

>gb|AC134536.5| Mus musculus BAC clone RP24-386B19 from 7, complete sequence
          Length = 163463

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   atgaaacaaaacaaaaactcg 177
             |||||||||||||||||||||
Sbjct: 95063 atgaaacaaaacaaaaactcg 95083

>gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, complete sequence
          Length = 228741

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   agatgaaacaaaacaaaaact 175
             |||||||||||||||||||||
Sbjct: 81228 agatgaaacaaaacaaaaact 81208

>gb|AC127348.4| Mus musculus BAC clone RP23-57D10 from chromosome 7, complete sequence
          Length = 229190

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    gactgcaccgcagcaccaca 98
             ||||||||||||||||||||
Sbjct: 40960 gactgcaccgcagcaccaca 40979

>gb|AC115294.5| Mus musculus BAC clone RP23-97A19 from chromosome 3, complete sequence
          Length = 149451

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   atgaaacaaaacaaaaactc 176
             ||||||||||||||||||||
Sbjct: 56708 atgaaacaaaacaaaaactc 56727

>gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, complete sequence
          Length = 211296

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    agatgaaacaaaacaaaaac 174
              ||||||||||||||||||||
Sbjct: 174828 agatgaaacaaaacaaaaac 174809

>gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, complete sequence
          Length = 319367

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    agatgaaacaaaacaaaaac 174
              ||||||||||||||||||||
Sbjct: 266035 agatgaaacaaaacaaaaac 266016

>emb|AL590311.5| Human DNA sequence from clone RP11-20F16 on chromosome 9 Contains the
             5' end of the GDA gene for guanine deaminase and a CpG
             island, complete sequence
          Length = 131933

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   atgaaacaaaacaaaaactc 176
             ||||||||||||||||||||
Sbjct: 61658 atgaaacaaaacaaaaactc 61639

>emb|AL354682.22| Human DNA sequence from clone RP11-282L14 on chromosome 9, complete
             sequence
          Length = 108785

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   tgaaatcactagaaaataca 219
             ||||||||||||||||||||
Sbjct: 29483 tgaaatcactagaaaataca 29502

>emb|AL023803.3|HS616B8 Human DNA sequence from clone RP4-616B8 on chromosome 20q11.22-12
             Contains the DDX35 gene for DEAD/H box polypeptide 35, the
             NPM1P19 gene for nucleophosmin 1 (nucleolar phosphoprotein
             B23, numatrin) pseudogene 19, the C20orf129 gene for
             chromosome 20 open reading frame 129, the 3' end of the
             PPP1R16B gene for protein phosphatase 1 regulatory
             (inhibitory) subunit 16B and four CpG islands, complete
             sequence
          Length = 155379

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 149   cacaccagatgaaacaaaacaaaa 172
             ||||||||| ||||||||||||||
Sbjct: 85536 cacaccagaagaaacaaaacaaaa 85513

>gb|AC096039.7| Rattus norvegicus 4 BAC CH230-29I22 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 224101

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   cagatgaaacaaaacaaaaa 173
             ||||||||||||||||||||
Sbjct: 82957 cagatgaaacaaaacaaaaa 82938

>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     aaaacagaatattttattcc 278
               ||||||||||||||||||||
Sbjct: 1864499 aaaacagaatattttattcc 1864518

>emb|BX510911.10| Zebrafish DNA sequence from clone CH211-150K17 in linkage group 10,
             complete sequence
          Length = 140584

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    catacagactaccaggaagc 30
             ||||||||||||||||||||
Sbjct: 23385 catacagactaccaggaagc 23366

>gb|AC158534.2| Mus musculus BAC clone RP23-32O6 from chromosome 7, complete sequence
          Length = 242359

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    gatgaaacaaaacaaaaact 175
              ||||||||||||||||||||
Sbjct: 114230 gatgaaacaaaacaaaaact 114249

>gb|AC131791.4| Mus musculus BAC clone RP24-462N24 from chromosome 7, complete sequence
          Length = 178072

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    gatgaaacaaaacaaaaact 175
              ||||||||||||||||||||
Sbjct: 130889 gatgaaacaaaacaaaaact 130908

>emb|BX649257.8| Zebrafish DNA sequence from clone CH211-197L9 in linkage group 23,
             complete sequence
          Length = 182686

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   gcacaccagatgaaacaaaa 167
             ||||||||||||||||||||
Sbjct: 40670 gcacaccagatgaaacaaaa 40689

>dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21C13
          Length = 75709

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   aaacaaaacaaaaactcgacaaag 183
             |||||||||||||||| |||||||
Sbjct: 31768 aaacaaaacaaaaactagacaaag 31745

>emb|AL161851.4|CNS01RHM Human chromosome 14 DNA sequence BAC R-1078I14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 187732

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 151   caccagatgaaacaaaacaaaaac 174
             ||||| ||||||||||||||||||
Sbjct: 51882 caccaaatgaaacaaaacaaaaac 51859

>dbj|AP004609.1| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-158I9, complete
             sequence
          Length = 195409

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   atgaaacaaaacaaaaactc 176
             ||||||||||||||||||||
Sbjct: 20953 atgaaacaaaacaaaaactc 20934

>dbj|AP002954.1| Homo sapiens genomic DNA, chromosome 11q, clons:CTC-89C10, complete
              sequence
          Length = 197215

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    atgaaacaaaacaaaaactc 176
              ||||||||||||||||||||
Sbjct: 182362 atgaaacaaaacaaaaactc 182343

>emb|CT030659.8| Mouse DNA sequence from clone RP23-125F8 on chromosome 9, complete
             sequence
          Length = 199662

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   accagatgaaacaaaacaaa 171
             ||||||||||||||||||||
Sbjct: 68328 accagatgaaacaaaacaaa 68347

>emb|AL772216.15| Mouse DNA sequence from clone RP23-153M22 on chromosome 2, complete
             sequence
          Length = 212233

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   aaacaaaacaaaaactcgacaaag 183
             |||||||||||||||| |||||||
Sbjct: 25855 aaacaaaacaaaaacttgacaaag 25832

>gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complete sequence
          Length = 217353

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gactgcaccgcagcaccaca 98
             ||||||||||||||||||||
Sbjct: 83957 gactgcaccgcagcaccaca 83938

>gb|AC145303.4| Mus musculus BAC clone RP23-411P20 from 14, complete sequence
          Length = 190168

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    agatgaaacaaaacaaaaac 174
              ||||||||||||||||||||
Sbjct: 166057 agatgaaacaaaacaaaaac 166076

>gb|AC153959.3| Mus musculus 10 BAC RP24-511J14 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 165278

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  agatgaaacaaaacaaaaac 174
            ||||||||||||||||||||
Sbjct: 2502 agatgaaacaaaacaaaaac 2483

>emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on chromosome 2, complete
             sequence
          Length = 241418

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   atgaaacaaaacaaaaactc 176
             ||||||||||||||||||||
Sbjct: 35442 atgaaacaaaacaaaaactc 35423

>emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chromosome 2, complete
              sequence
          Length = 193932

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    atgaaacaaaacaaaaactc 176
              ||||||||||||||||||||
Sbjct: 107052 atgaaacaaaacaaaaactc 107071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,231,423
Number of Sequences: 3902068
Number of extensions: 4231423
Number of successful extensions: 229504
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 229344
Number of HSP's gapped (non-prelim): 160
length of query: 331
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 309
effective length of database: 17,147,199,772
effective search space: 5298484729548
effective search space used: 5298484729548
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)