>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence
          Length = 174156

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aacactgaagcaaagtgaaa 29
              ||||||||||||||||||||
Sbjct: 114256 aacactgaagcaaagtgaaa 114275

>gb|AC079402.5| Homo sapiens BAC clone RP11-597E15 from 2, complete sequence
          Length = 86973

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   catcactattctcagatgta 152
             ||||||||||||||||||||
Sbjct: 56776 catcactattctcagatgta 56757

>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence
          Length = 204416

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 10   aacactgaagcaaagtgaaa 29
            ||||||||||||||||||||
Sbjct: 2319 aacactgaagcaaagtgaaa 2338

>gb|AY107485.1| Zea mays PCO090409 mRNA sequence
          Length = 615

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 140 attctcagatgtacgatcattattcaca 167
           ||||||||||||| || |||||||||||
Sbjct: 615 attctcagatgtatgagcattattcaca 588

>gb|AC140393.3| Mus musculus BAC clone RP24-179D17 from 14, complete sequence
          Length = 184279

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    aagcaaagtgaaatgagcgc 36
             ||||||||||||||||||||
Sbjct: 35994 aagcaaagtgaaatgagcgc 35975

>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 122    cgacaaagttgcatcacta 140
              |||||||||||||||||||
Sbjct: 701623 cgacaaagttgcatcacta 701641

>gb|AC161249.2| Mus musculus BAC clone RP24-541G2 from chromosome 13, complete sequence
          Length = 162934

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 132    gcatcactattctcagatg 150
              |||||||||||||||||||
Sbjct: 123032 gcatcactattctcagatg 123050

>gb|AC098487.1| Homo sapiens BAC clone RP11-499E18 from 4, complete sequence
          Length = 163914

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 78     ttcatccagatagatgatc 96
              |||||||||||||||||||
Sbjct: 126656 ttcatccagatagatgatc 126674

>dbj|AB026646.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIG5
          Length = 27194

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    aacactgaagcaaagtgaa 28
             |||||||||||||||||||
Sbjct: 21958 aacactgaagcaaagtgaa 21976

>gb|AC154511.2| Mus musculus BAC clone RP24-69N19 from 13, complete sequence
          Length = 197061

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 132    gcatcactattctcagatg 150
              |||||||||||||||||||
Sbjct: 184821 gcatcactattctcagatg 184803

>dbj|AP002360.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-111M22, complete
              sequences
          Length = 173379

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     taagatgaaaagaagagtt 117
              |||||||||||||||||||
Sbjct: 136575 taagatgaaaagaagagtt 136593

>emb|CT030182.8| Mouse DNA sequence from clone RP23-21N15 on chromosome 13, complete
              sequence
          Length = 218811

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 98     ataagatgaaaagaagagttcta 120
              ||||||||||||||||| |||||
Sbjct: 128384 ataagatgaaaagaagaattcta 128362

>emb|AL831739.10| Mouse DNA sequence from clone RP23-395O3 on chromosome 4, complete
             sequence
          Length = 121869

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 48    caaagcagtcacaaactttgtac 70
             |||||||| ||||||||||||||
Sbjct: 31847 caaagcagacacaaactttgtac 31869


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,435,292
Number of Sequences: 3902068
Number of extensions: 1435292
Number of successful extensions: 106104
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106070
Number of HSP's gapped (non-prelim): 34
length of query: 170
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 148
effective length of database: 17,147,199,772
effective search space: 2537785566256
effective search space used: 2537785566256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)