Clone Name | rbart53g05 |
---|---|
Clone Library Name | barley_pub |
>AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase IG (EC 3.6.3.1)| (ATPase class I type 11C) (ATPase IG) (ATPase IQ) (ATPase class VI type 11C) Length = 1132 Score = 28.1 bits (61), Expect = 5.8 Identities = 9/29 (31%), Positives = 19/29 (65%) Frame = -1 Query: 95 YFFFLRIPRYITPWVYVLLCLFVSLFARV 9 YF F ++ ++ W+ ++L +F+SLF + Sbjct: 1057 YFVFAQMLSSVSTWLAIILLIFISLFPEI 1085
>RAS1_YEAST (P01119) Ras-like protein 1 precursor| Length = 309 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = +3 Query: 39 KQYINPRGNVTGNTKEKKVGNGRALHVTHHTQ 134 K Y+N N GNTK GNG ++ Q Sbjct: 244 KNYVNQNNNNEGNTKYSSNGNGNRSDISRGNQ 275
>AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 11C (EC 3.6.3.1)| (Fragment) Length = 347 Score = 27.3 bits (59), Expect = 9.9 Identities = 9/29 (31%), Positives = 19/29 (65%) Frame = -1 Query: 95 YFFFLRIPRYITPWVYVLLCLFVSLFARV 9 YF F ++ ++ W+ ++L +F+SLF + Sbjct: 285 YFVFAQMLCSVSTWLAIILLIFISLFPEI 313
>M130_STRPU (P08472) Mesenchyme-specific cell surface glycoprotein precursor| (MSP130) Length = 779 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +3 Query: 27 NK*TKQYINPRGNVTGNTKEKKVGNGRALHVTHHT 131 N TK+Y+NP G +T V NG + + + T Sbjct: 202 NNYTKKYVNPEGTITTVRLAGSVSNGPSQQIVNTT 236
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 79 RRKKK*EMGEHYTSRITHSTGNRLTKVIKRPNQPGAGRGYVR 204 R++ K T+R+ + +R+ K ++R N P AG +VR Sbjct: 1320 RKENKFSAKRLQTTRLGNHLEDRVNKFLRRQNHPEAGEVFVR 1361
>PLLP_RAT (P47987) Plasmolipin (Plasma membrane proteolipid)| Length = 182 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 101 ISYFFFLRIPRYITPWVYVLLCLFVS 24 I Y F L + Y+ PW VLL FV+ Sbjct: 85 IIYLFQLHMKLYMVPWPLVLLVFFVA 110
>PLLP_MOUSE (Q9DCU2) Plasmolipin (Plasma membrane proteolipid)| Length = 182 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 101 ISYFFFLRIPRYITPWVYVLLCLFVS 24 I Y F L + Y+ PW VLL FV+ Sbjct: 85 IIYLFQLHMKLYMVPWPLVLLIFFVA 110
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 79 RRKKK*EMGEHYTSRITHSTGNRLTKVIKRPNQPGAGRGYVR 204 R++ K T+R+ + +R+ K ++R N P AG +VR Sbjct: 1319 RKENKFSAKRLQTTRLGNHLEDRVNKFLRRQNHPEAGEVFVR 1360
>YPS2_PLEBO (P15734) Hypothetical 13.1 kDa protein (ORF2)| Length = 122 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +3 Query: 24 TNK*TKQYINPRGNVTGNTKEKKVGNGRA 110 TN T+ N GN TGNT NG A Sbjct: 87 TNSRTESESNGNGNATGNTSSNANSNGNA 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,552,376 Number of Sequences: 219361 Number of extensions: 670791 Number of successful extensions: 1324 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1324 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)