Clone Name | rbart53g03 |
---|---|
Clone Library Name | barley_pub |
>NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor)| Length = 464 Score = 32.0 bits (71), Expect = 0.37 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 9/51 (17%) Frame = -1 Query: 127 WF---ACALP-PTDSVYGVPCITWH-----YLCVTKIPNQSYKLYYTYSLF 2 WF A ALP P S +P WH Y+C P+++ + YYT SLF Sbjct: 229 WFIALATALPIPIVSGLDIPMSPWHTKCEKYICREMWPSRTQEYYYTLSLF 279
>NPY5R_HUMAN (Q15761) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)| (Y5 receptor) (NPYY5) Length = 455 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = -1 Query: 115 ALPPTDSVYGVPCITWHYLCVTKIPNQSYKLYYTYSL 5 +L +G ++ YLCV P+ SY++ +T SL Sbjct: 189 SLVELQETFGSALLSSRYLCVESWPSDSYRIAFTISL 225
>HYAL1_PIG (Q6RHW4) Hyaluronidase-1 precursor (EC 3.2.1.35) (Hyal-1)| (Hyaluronoglucosaminidase-1) Length = 435 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = -3 Query: 152 PCVGNVGSMVCMCSPA----H*LCVRCTMHNMALPVCNQNTKS 36 P + NV S +CS A H CVR H ALP+ N ++ S Sbjct: 346 PFILNVTSGALLCSQAVCSGHGRCVRRPSHTEALPILNPSSFS 388
>YNL6_YEAST (P53924) RING finger protein YNL116W| Length = 522 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -1 Query: 118 CALPPTDSVYGVPCI-TWHYLCVTKIPNQSY 29 C + P +++ PC +WH+ CV ++ SY Sbjct: 438 CKIKPCQAIFISPCAHSWHFRCVRRLVMLSY 468
>YJP2_YEAST (P47003) Hypothetical 13.7 kDa protein in INO1-IDS2 intergenic| region Length = 119 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%) Frame = +3 Query: 126 HASYISHTW----SRR*TTTPHMTPDRRHLKLRDPTQNTKNK 239 H + +HTW S + PH TP+ RH+ + +N +N+ Sbjct: 3 HLAAEAHTWPPHISHSTLSIPHPTPEHRHVFHKKDVKNKRNE 44
>NPY5R_PIG (O97969) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)| (Y5 receptor) Length = 446 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -1 Query: 91 YGVPCITWHYLCVTKIPNQSYKLYYTYSL 5 +G ++ YLCV P+ SY++ +T SL Sbjct: 187 FGSAWLSSRYLCVESWPSDSYRIAFTISL 215
>NPY5R_RAT (Q63634) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)| (Y5 receptor) Length = 456 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -1 Query: 91 YGVPCITWHYLCVTKIPNQSYKLYYTYSL 5 +G ++ YLCV P+ SY++ +T SL Sbjct: 198 FGSALLSSKYLCVESWPSDSYRIAFTISL 226
>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3| precursor (LTBP-3) Length = 1268 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = -3 Query: 215 ITELEMPSVWCHMWGRRLAS*PCVGNVGSMVCMCSPAH 102 I E MP CH C+ N GS C+C P H Sbjct: 353 INECAMPGNVCHG--------DCLNNPGSYRCVCPPGH 382
>NPY5R_MOUSE (O70342) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)| (Y5 receptor) Length = 466 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -1 Query: 91 YGVPCITWHYLCVTKIPNQSYKLYYTYSL 5 +G ++ YLCV P+ SY++ +T SL Sbjct: 208 FGSALLSSKYLCVESWPSDSYRIAFTISL 236
>HUNB_DROTA (O46260) Protein hunchback (Fragments)| Length = 192 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/74 (22%), Positives = 29/74 (39%) Frame = +3 Query: 96 ESVGGRAHANHASYISHTWSRR*TTTPHMTPDRRHLKLRDPTQNTKNKIRQMISINRVMN 275 E + H +HA + H S ++PH +P L +P NT ++ Q + + Sbjct: 13 EPISHHHHHHHAHHSHHADSNSNASSPHQSP----LPSPNPPSNTNLQLEQYLKQQQQQQ 68 Query: 276 CNQQRGQSACMHAC 317 Q+ Q C Sbjct: 69 QQHQQQQQPMDTLC 82
>CAUP_DROME (P54269) Homeobox protein caupolican| Length = 693 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +3 Query: 87 PYTESVGGRAHANHASYISHTWSRR*TTTPHMTPDRRHLKLRDPTQN 227 PY G AH HA+Y S+ S T PH + H + + QN Sbjct: 369 PYATPPG--AHPMHAAYSSYAQSHNTHTHPHPQQMQHHQQQQQQQQN 413 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,241,724 Number of Sequences: 219361 Number of extensions: 1069795 Number of successful extensions: 2848 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2662 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2847 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)