ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart53g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor) 32 0.37
2NPY5R_HUMAN (Q15761) Neuropeptide Y receptor type 5 (NPY5-R) (NP... 28 4.1
3HYAL1_PIG (Q6RHW4) Hyaluronidase-1 precursor (EC 3.2.1.35) (Hyal... 28 5.4
4YNL6_YEAST (P53924) RING finger protein YNL116W 28 5.4
5YJP2_YEAST (P47003) Hypothetical 13.7 kDa protein in INO1-IDS2 i... 28 5.4
6NPY5R_PIG (O97969) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-... 28 7.1
7NPY5R_RAT (Q63634) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-... 28 7.1
8LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-bind... 28 7.1
9NPY5R_MOUSE (O70342) Neuropeptide Y receptor type 5 (NPY5-R) (NP... 28 7.1
10HUNB_DROTA (O46260) Protein hunchback (Fragments) 27 9.2
11CAUP_DROME (P54269) Homeobox protein caupolican 27 9.2

>NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor)|
          Length = 464

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
 Frame = -1

Query: 127 WF---ACALP-PTDSVYGVPCITWH-----YLCVTKIPNQSYKLYYTYSLF 2
           WF   A ALP P  S   +P   WH     Y+C    P+++ + YYT SLF
Sbjct: 229 WFIALATALPIPIVSGLDIPMSPWHTKCEKYICREMWPSRTQEYYYTLSLF 279



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>NPY5R_HUMAN (Q15761) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)|
           (Y5 receptor) (NPYY5)
          Length = 455

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 115 ALPPTDSVYGVPCITWHYLCVTKIPNQSYKLYYTYSL 5
           +L      +G   ++  YLCV   P+ SY++ +T SL
Sbjct: 189 SLVELQETFGSALLSSRYLCVESWPSDSYRIAFTISL 225



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>HYAL1_PIG (Q6RHW4) Hyaluronidase-1 precursor (EC 3.2.1.35) (Hyal-1)|
           (Hyaluronoglucosaminidase-1)
          Length = 435

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -3

Query: 152 PCVGNVGSMVCMCSPA----H*LCVRCTMHNMALPVCNQNTKS 36
           P + NV S   +CS A    H  CVR   H  ALP+ N ++ S
Sbjct: 346 PFILNVTSGALLCSQAVCSGHGRCVRRPSHTEALPILNPSSFS 388



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>YNL6_YEAST (P53924) RING finger protein YNL116W|
          Length = 522

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 118 CALPPTDSVYGVPCI-TWHYLCVTKIPNQSY 29
           C + P  +++  PC  +WH+ CV ++   SY
Sbjct: 438 CKIKPCQAIFISPCAHSWHFRCVRRLVMLSY 468



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>YJP2_YEAST (P47003) Hypothetical 13.7 kDa protein in INO1-IDS2 intergenic|
           region
          Length = 119

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +3

Query: 126 HASYISHTW----SRR*TTTPHMTPDRRHLKLRDPTQNTKNK 239
           H +  +HTW    S    + PH TP+ RH+  +   +N +N+
Sbjct: 3   HLAAEAHTWPPHISHSTLSIPHPTPEHRHVFHKKDVKNKRNE 44



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>NPY5R_PIG (O97969) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)|
           (Y5 receptor)
          Length = 446

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 91  YGVPCITWHYLCVTKIPNQSYKLYYTYSL 5
           +G   ++  YLCV   P+ SY++ +T SL
Sbjct: 187 FGSAWLSSRYLCVESWPSDSYRIAFTISL 215



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>NPY5R_RAT (Q63634) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)|
           (Y5 receptor)
          Length = 456

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 91  YGVPCITWHYLCVTKIPNQSYKLYYTYSL 5
           +G   ++  YLCV   P+ SY++ +T SL
Sbjct: 198 FGSALLSSKYLCVESWPSDSYRIAFTISL 226



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>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3|
           precursor (LTBP-3)
          Length = 1268

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = -3

Query: 215 ITELEMPSVWCHMWGRRLAS*PCVGNVGSMVCMCSPAH 102
           I E  MP   CH          C+ N GS  C+C P H
Sbjct: 353 INECAMPGNVCHG--------DCLNNPGSYRCVCPPGH 382



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>NPY5R_MOUSE (O70342) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)|
           (Y5 receptor)
          Length = 466

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 91  YGVPCITWHYLCVTKIPNQSYKLYYTYSL 5
           +G   ++  YLCV   P+ SY++ +T SL
Sbjct: 208 FGSALLSSKYLCVESWPSDSYRIAFTISL 236



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>HUNB_DROTA (O46260) Protein hunchback (Fragments)|
          Length = 192

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/74 (22%), Positives = 29/74 (39%)
 Frame = +3

Query: 96  ESVGGRAHANHASYISHTWSRR*TTTPHMTPDRRHLKLRDPTQNTKNKIRQMISINRVMN 275
           E +    H +HA +  H  S    ++PH +P    L   +P  NT  ++ Q +   +   
Sbjct: 13  EPISHHHHHHHAHHSHHADSNSNASSPHQSP----LPSPNPPSNTNLQLEQYLKQQQQQQ 68

Query: 276 CNQQRGQSACMHAC 317
              Q+ Q      C
Sbjct: 69  QQHQQQQQPMDTLC 82



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>CAUP_DROME (P54269) Homeobox protein caupolican|
          Length = 693

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +3

Query: 87  PYTESVGGRAHANHASYISHTWSRR*TTTPHMTPDRRHLKLRDPTQN 227
           PY    G  AH  HA+Y S+  S    T PH    + H + +   QN
Sbjct: 369 PYATPPG--AHPMHAAYSSYAQSHNTHTHPHPQQMQHHQQQQQQQQN 413


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,241,724
Number of Sequences: 219361
Number of extensions: 1069795
Number of successful extensions: 2848
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2847
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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