ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart53g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL670999.4| Mouse DNA sequence from clone RP23-168F16 on chr... 44 0.12
2emb|CR352264.6| Mouse DNA sequence from clone RP23-344N9 on chro... 44 0.12
3ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome reg... 42 0.48
4gb|AC163021.5| Mus musculus chromosome 15, clone RP23-228E13, co... 42 0.48
5gb|AC124303.5| Homo sapiens chromosome 15, clone RP11-145P16, co... 42 0.48
6gb|AF250841.1|AF250841 Homo sapiens PAC clones A17157 and P0950 ... 42 0.48
7gb|AC110196.9| Mus musculus chromosome 15, clone RP24-343E7, com... 42 0.48
8gb|AC099720.7| Mus musculus chromosome 10, clone RP23-415H15, co... 40 1.9
9gb|AF298229.1| Fossil carabid 131-8F NADH dehydrogenase subunit ... 40 1.9
10gb|AF298228.1|AF298228 Fossil carabid 89-F NADH dehydrogenase su... 40 1.9
11gb|AF294277.1|AF294277 Fossil carabid 131-8G NADH dehydrogenase ... 40 1.9
12gb|AF294276.1|AF294276 Fossil carabid 131-8D NADH dehydrogenase ... 40 1.9
13gb|AF294275.1|AF294275 Fossil carabid 131-8C NADH dehydrogenase ... 40 1.9
14gb|AF294274.1|AF294274 Fossil carabid 131-8B NADH dehydrogenase ... 40 1.9
15gb|AF294273.1|AF294273 Fossil carabid 131-2A NADH dehydrogenase ... 40 1.9
16gb|AC160407.6| Mus musculus 10 BAC RP24-445P5 (Roswell Park Canc... 40 1.9
17gb|AC153492.5| Mus musculus 10 BAC RP23-292N5 (Roswell Park Canc... 40 1.9
18emb|AL122126.4|CNS01DT1 Human chromosome 14 DNA sequence BAC R-3... 40 1.9
19ref|XM_631409.1| Dictyostelium discoideum valine-tRNA ligase (DD... 38 7.4
20gb|AC108767.10| Mus musculus chromosome 3, clone RP24-377E5, com... 38 7.4
21gb|AF097649.1| Homo sapiens chromosome 7qtelo BAC E5, complete s... 38 7.4
22gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 38 7.4
23gb|AE006438.1| Lactococcus lactis subsp. lactis IL1403 section 2... 38 7.4
24gb|AC124773.4| Mus musculus BAC clone RP23-49B23 from 3, complet... 38 7.4
25gb|AC121972.2| Mus musculus BAC clone RP24-276H18 from 2, comple... 38 7.4
26ref|XM_651457.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 38 7.4
27gb|AY590170.1| Tetrix tubercarina 16S ribosomal RNA gene, partia... 38 7.4
28gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete se... 38 7.4
29ref|XM_784891.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 7.4
30gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswel... 38 7.4
31ref|XM_779892.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 7.4
32emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 38 7.4
33emb|AJ508355.1|BMA508355 Brugia malayi ORF1, ORF2, ORF3 and ORF4... 38 7.4
34emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in... 38 7.4
35gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 38 7.4
36gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell ... 38 7.4
37gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Hu... 38 7.4
38gb|AC113551.3| Homo sapiens chromosome 18, clone RP11-208K1, com... 38 7.4
39gb|AC021118.6| Homo sapiens BAC clone RP11-332D24 from 4, comple... 38 7.4
40gb|AC011709.11| Homo sapiens chromosome 18, clone RP11-500H12, c... 38 7.4
41gb|AC068037.5| Homo sapiens BAC clone RP11-757K22 from 4, comple... 38 7.4
42dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.4
43gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J... 38 7.4
44gb|AC079120.6| Homo sapiens BAC clone RP11-345M24 from 2, comple... 38 7.4
45gb|AC013407.7| Homo sapiens BAC clone RP11-399L3 from 2, complet... 38 7.4
46gb|AC010974.9| Homo sapiens BAC clone RP11-159N20 from 2, comple... 38 7.4
47gb|AC135335.3| Homo sapiens chromosome 18, clone RP13-1026H1, co... 38 7.4
48emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134... 38 7.4
49emb|BX545905.9| Mouse DNA sequence from clone RP23-339J7 on chro... 38 7.4
50emb|CR786562.6| Zebrafish DNA sequence from clone CH211-244H7 in... 38 7.4
51emb|BX927076.9| Zebrafish DNA sequence from clone CH211-241L24 i... 38 7.4
52gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73... 38 7.4
53gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 7.4
54emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa... 38 7.4
55gb|AY066585.1| Schmidtea mediterranea clone H.106.4c unknown mRN... 38 7.4 
>emb|AL670999.4| Mouse DNA sequence from clone RP23-168F16 on chromosome 4 Contains the
              (pseudo)gene for a novel protein similar to high-mobility
              group box 1 (Hmgb1), complete sequence
          Length = 226259

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 3      ggaacttccaaattaaatcaat 24
              ||||||||||||||||||||||
Sbjct: 129093 ggaacttccaaattaaatcaat 129114
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>emb|CR352264.6| Mouse DNA sequence from clone RP23-344N9 on chromosome 4 Contains a
             high mobility group box 1 (Hmgb1) pseudogene, complete
             sequence
          Length = 185595

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 3     ggaacttccaaattaaatcaat 24
             ||||||||||||||||||||||
Sbjct: 88426 ggaacttccaaattaaatcaat 88447
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>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on chromosome
              15
          Length = 755217

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 8      ttccaaattaaatcaatataaaaga 32
              ||||||||||||||||||| |||||
Sbjct: 337223 ttccaaattaaatcaatattaaaga 337247
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>gb|AC163021.5| Mus musculus chromosome 15, clone RP23-228E13, complete sequence
          Length = 215165

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     aattaaatcaatataaaagaa 33
              |||||||||||||||||||||
Sbjct: 203286 aattaaatcaatataaaagaa 203266
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>gb|AC124303.5| Homo sapiens chromosome 15, clone RP11-145P16, complete sequence
          Length = 160535

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 8      ttccaaattaaatcaatataaaaga 32
              ||||||||||||||||||| |||||
Sbjct: 141036 ttccaaattaaatcaatattaaaga 141012
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>gb|AF250841.1|AF250841 Homo sapiens PAC clones A17157 and P0950 imprinted HBII-85 and HBII-52
             small nucleolar RNA genes, complete sequence
          Length = 228017

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 8     ttccaaattaaatcaatataaaaga 32
             ||||||||||||||||||| |||||
Sbjct: 30466 ttccaaattaaatcaatattaaaga 30490
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>gb|AC110196.9| Mus musculus chromosome 15, clone RP24-343E7, complete sequence
          Length = 154367

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     aattaaatcaatataaaagaa 33
              |||||||||||||||||||||
Sbjct: 129405 aattaaatcaatataaaagaa 129425
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>gb|AC099720.7| Mus musculus chromosome 10, clone RP23-415H15, complete sequence
          Length = 212928

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ttaaatcaatataaaagaag 34
             ||||||||||||||||||||
Sbjct: 66468 ttaaatcaatataaaagaag 66449
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>gb|AF298229.1| Fossil carabid 131-8F NADH dehydrogenase subunit I (ND1) gene,
           partial cds; tRNA-Leu gene, complete sequence; and 16S
           ribosomal RNA gene, partial sequence; mitochondrial
           genes for mitochondrial products
          Length = 316

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 12  aaattaaatcaatataaaagaagt 35
           ||||||||||||||||||| ||||
Sbjct: 110 aaattaaatcaatataaaacaagt 133
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>gb|AF298228.1|AF298228 Fossil carabid 89-F NADH dehydrogenase subunit I (ND1) gene,
           partial cds; tRNA-Leu gene, complete sequence; and 16S
           ribosomal RNA gene, partial sequence; mitochondrial
           genes for mitochondrial products
          Length = 316

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 12  aaattaaatcaatataaaagaagt 35
           ||||||||||||||||||| ||||
Sbjct: 110 aaattaaatcaatataaaacaagt 133
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>gb|AF294277.1|AF294277 Fossil carabid 131-8G NADH dehydrogenase subunit I (NDI) gene,
           partial cds; tRNA-Leu gene, complete sequence; and 16S
           ribosomal RNA gene, partial sequence; mitochondrial
           genes for mitochondrial products
          Length = 316

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 12  aaattaaatcaatataaaagaagt 35
           ||||||||||||||||||| ||||
Sbjct: 110 aaattaaatcaatataaaacaagt 133
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>gb|AF294276.1|AF294276 Fossil carabid 131-8D NADH dehydrogenase subunit I (NDI) gene,
           partial cds; tRNA-Leu gene, complete sequence; and 16S
           ribosomal RNA gene, partial sequence; mitochondrial
           genes for mitochondrial products
          Length = 316

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 12  aaattaaatcaatataaaagaagt 35
           ||||||||||||||||||| ||||
Sbjct: 110 aaattaaatcaatataaaacaagt 133
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>gb|AF294275.1|AF294275 Fossil carabid 131-8C NADH dehydrogenase subunit I (NDI) gene,
           partial cds; tRNA-Leu gene, complete sequence; and 16S
           ribosomal RNA gene, partial sequence; mitochondrial
           genes for mitochondrial products
          Length = 317

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 12  aaattaaatcaatataaaagaagt 35
           ||||||||||||||||||| ||||
Sbjct: 110 aaattaaatcaatataaaacaagt 133
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>gb|AF294274.1|AF294274 Fossil carabid 131-8B NADH dehydrogenase subunit I (NDI) gene,
           partial cds; tRNA-Leu gene, complete sequence; and 16S
           ribosomal RNA gene, partial sequence; mitochondrial
           genes for mitochondrial products
          Length = 316

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 12  aaattaaatcaatataaaagaagt 35
           ||||||||||||||||||| ||||
Sbjct: 110 aaattaaatcaatataaaacaagt 133
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>gb|AF294273.1|AF294273 Fossil carabid 131-2A NADH dehydrogenase subunit I (NDI) gene,
           partial cds; tRNA-Leu gene, complete sequence; and 16S
           ribosomal RNA gene, partial sequence; mitochondrial
           genes for mitochondrial products
          Length = 316

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 12  aaattaaatcaatataaaagaagt 35
           ||||||||||||||||||| ||||
Sbjct: 110 aaattaaatcaatataaaacaagt 133
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>gb|AC160407.6| Mus musculus 10 BAC RP24-445P5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 186970

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ttaaatcaatataaaagaag 34
             ||||||||||||||||||||
Sbjct: 16260 ttaaatcaatataaaagaag 16279
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>gb|AC153492.5| Mus musculus 10 BAC RP23-292N5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195237

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    aaattaaatcaatataaaag 31
             ||||||||||||||||||||
Sbjct: 66159 aaattaaatcaatataaaag 66178
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>emb|AL122126.4|CNS01DT1 Human chromosome 14 DNA sequence BAC R-30H9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 150076

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    aaattaaatcaatataaaag 31
             ||||||||||||||||||||
Sbjct: 60778 aaattaaatcaatataaaag 60759
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>ref|XM_631409.1| Dictyostelium discoideum valine-tRNA ligase (DDB0231274), partial
            mRNA
          Length = 3195

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 12   aaattaaatcaatataaaa 30
            |||||||||||||||||||
Sbjct: 3148 aaattaaatcaatataaaa 3166
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>gb|AC108767.10| Mus musculus chromosome 3, clone RP24-377E5, complete sequence
          Length = 167878

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 89     aatggctagctcaagtctc 107
              |||||||||||||||||||
Sbjct: 130301 aatggctagctcaagtctc 130283
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>gb|AF097649.1| Homo sapiens chromosome 7qtelo BAC E5, complete sequence
          Length = 51858

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    aaattaaatcaatataaaa 30
             |||||||||||||||||||
Sbjct: 31839 aaattaaatcaatataaaa 31821
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 67      tatcccgtcacaatacttc 85
               |||||||||||||||||||
Sbjct: 2444339 tatcccgtcacaatacttc 2444357
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>gb|AE006438.1| Lactococcus lactis subsp. lactis IL1403 section 200 of 218 of the
            complete genome
          Length = 10237

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   tttgcaggaaatgcaattg 56
            |||||||||||||||||||
Sbjct: 6849 tttgcaggaaatgcaattg 6831
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>gb|AC124773.4| Mus musculus BAC clone RP23-49B23 from 3, complete sequence
          Length = 216860

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    aatggctagctcaagtctc 107
             |||||||||||||||||||
Sbjct: 19259 aatggctagctcaagtctc 19241
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>gb|AC121972.2| Mus musculus BAC clone RP24-276H18 from 2, complete sequence
          Length = 193641

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      ttccaaattaaatcaatat 26
              |||||||||||||||||||
Sbjct: 110191 ttccaaattaaatcaatat 110209
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>ref|XM_651457.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (11.t00021)
            partial mRNA
          Length = 2766

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 12   aaattaaatcaatataaaa 30
            |||||||||||||||||||
Sbjct: 1987 aaattaaatcaatataaaa 2005
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>gb|AY590170.1| Tetrix tubercarina 16S ribosomal RNA gene, partial sequence
          Length = 487

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 12  aaattaaatcaatataaaa 30
           |||||||||||||||||||
Sbjct: 249 aaattaaatcaatataaaa 231
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>gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete sequence
          Length = 152468

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    aaattaaatcaatataaaa 30
             |||||||||||||||||||
Sbjct: 74099 aaattaaatcaatataaaa 74081
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>ref|XM_784891.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA replication
            licensing factor MCM2 (LOC585050), partial mRNA
          Length = 1922

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 125  caggcatcatccttcaaat 143
            |||||||||||||||||||
Sbjct: 1877 caggcatcatccttcaaat 1895
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>gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswell Park Cancer Institute
              Drosophila BAC library) complete sequence
          Length = 199396

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     aggaaatgcaattgctact 61
              |||||||||||||||||||
Sbjct: 163241 aggaaatgcaattgctact 163223
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>ref|XM_779892.1| PREDICTED: Strongylocentrotus purpuratus similar to minichromosome
            maintenance protein 2 (LOC579797), mRNA
          Length = 2745

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 125  caggcatcatccttcaaat 143
            |||||||||||||||||||
Sbjct: 2080 caggcatcatccttcaaat 2098
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>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     atcaatataaaagaagtgg 37
              |||||||||||||||||||
Sbjct: 624528 atcaatataaaagaagtgg 624546
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>emb|AJ508355.1|BMA508355 Brugia malayi ORF1, ORF2, ORF3 and ORF4 DNA and alt-1 gene
          Length = 32442

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 7     cttccaaattaaatcaatataaa 29
             ||||||||||||||||| |||||
Sbjct: 10316 cttccaaattaaatcaaaataaa 10338
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>emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in linkage group 5,
              complete sequence
          Length = 168673

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 11     caaattaaatcaatataaa 29
              |||||||||||||||||||
Sbjct: 155158 caaattaaatcaatataaa 155140
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>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 137    ttcaaattaagggactcta 155
              |||||||||||||||||||
Sbjct: 153170 ttcaaattaagggactcta 153188
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>gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 184424

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     aggaaatgcaattgctact 61
              |||||||||||||||||||
Sbjct: 168888 aggaaatgcaattgctact 168906
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>gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Human BAC library)
              complete sequence
          Length = 236281

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 3      ggaacttccaaattaaatcaata 25
              |||||||| ||||||||||||||
Sbjct: 220130 ggaacttcaaaattaaatcaata 220108
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>gb|AC113551.3| Homo sapiens chromosome 18, clone RP11-208K1, complete sequence
          Length = 179281

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    aaattaaatcaatataaaa 30
             |||||||||||||||||||
Sbjct: 78538 aaattaaatcaatataaaa 78556
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>gb|AC021118.6| Homo sapiens BAC clone RP11-332D24 from 4, complete sequence
          Length = 194612

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     caatataaaagaagtggtt 39
              |||||||||||||||||||
Sbjct: 130101 caatataaaagaagtggtt 130119
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>gb|AC011709.11| Homo sapiens chromosome 18, clone RP11-500H12, complete sequence
          Length = 193321

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     aaattaaatcaatataaaa 30
              |||||||||||||||||||
Sbjct: 172642 aaattaaatcaatataaaa 172624
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>gb|AC068037.5| Homo sapiens BAC clone RP11-757K22 from 4, complete sequence
          Length = 206136

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 14     attaaatcaatataaaaga 32
              |||||||||||||||||||
Sbjct: 143257 attaaatcaatataaaaga 143275
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 6       acttccaaattaaatcaat 24
               |||||||||||||||||||
Sbjct: 4878825 acttccaaattaaatcaat 4878843
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>gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete
             sequence
          Length = 93234

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    atcaatataaaagaagtgg 37
             |||||||||||||||||||
Sbjct: 36483 atcaatataaaagaagtgg 36465
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>gb|AC079120.6| Homo sapiens BAC clone RP11-345M24 from 2, complete sequence
          Length = 104547

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    agaagtggtttgcaggaaa 48
             |||||||||||||||||||
Sbjct: 17285 agaagtggtttgcaggaaa 17303
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>gb|AC013407.7| Homo sapiens BAC clone RP11-399L3 from 2, complete sequence
          Length = 171428

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    aaattaaatcaatataaaa 30
             |||||||||||||||||||
Sbjct: 99184 aaattaaatcaatataaaa 99166
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>gb|AC010974.9| Homo sapiens BAC clone RP11-159N20 from 2, complete sequence
          Length = 147131

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 15    ttaaatcaatataaaagaagtgg 37
             ||||| |||||||||||||||||
Sbjct: 87693 ttaaaccaatataaaagaagtgg 87715
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>gb|AC135335.3| Homo sapiens chromosome 18, clone RP13-1026H1, complete sequence
          Length = 155498

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     aaattaaatcaatataaaa 30
              |||||||||||||||||||
Sbjct: 129226 aaattaaatcaatataaaa 129244
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>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 120825

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     acttccaaattaaatcaat 24
             |||||||||||||||||||
Sbjct: 59597 acttccaaattaaatcaat 59579
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>emb|BX545905.9| Mouse DNA sequence from clone RP23-339J7 on chromosome 2, complete
             sequence
          Length = 128574

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     ttccaaattaaatcaatat 26
             |||||||||||||||||||
Sbjct: 55524 ttccaaattaaatcaatat 55542
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>emb|CR786562.6| Zebrafish DNA sequence from clone CH211-244H7 in linkage group 18,
              complete sequence
          Length = 144824

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     ttaaatcaatataaaagaa 33
              |||||||||||||||||||
Sbjct: 114552 ttaaatcaatataaaagaa 114570
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>emb|BX927076.9| Zebrafish DNA sequence from clone CH211-241L24 in linkage group 18,
             complete sequence
          Length = 152951

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    ttaaatcaatataaaagaa 33
             |||||||||||||||||||
Sbjct: 26855 ttaaatcaatataaaagaa 26837
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>gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73 of 83 of the complete
              sequence
          Length = 323816

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     aggaaatgcaattgctact 61
              |||||||||||||||||||
Sbjct: 303549 aggaaatgcaattgctact 303531
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 6       acttccaaattaaatcaat 24
               |||||||||||||||||||
Sbjct: 4878807 acttccaaattaaatcaat 4878825
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>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 141053

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     acttccaaattaaatcaat 24
             |||||||||||||||||||
Sbjct: 81134 acttccaaattaaatcaat 81116
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>gb|AY066585.1| Schmidtea mediterranea clone H.106.4c unknown mRNA sequence
          Length = 579

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 12  aaattaaatcaatataaaa 30
           |||||||||||||||||||
Sbjct: 402 aaattaaatcaatataaaa 420


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,584,551
Number of Sequences: 3902068
Number of extensions: 1584551
Number of successful extensions: 114966
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114697
Number of HSP's gapped (non-prelim): 269
length of query: 155
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 133
effective length of database: 17,147,199,772
effective search space: 2280577569676
effective search space used: 2280577569676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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