Clone Name | rbart53g01 |
---|---|
Clone Library Name | barley_pub |
>gb|AY206414.1| Ipomoea batatas anionic peroxidase swpb3 mRNA, complete cds Length = 1290 Score = 79.8 bits (40), Expect = 5e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagatatctcccatct 243 |||||||||||||||||| |||||| |||||||| ||||| ||| |||||| ||||||| Sbjct: 999 tcctgcagttcttcctgatctctccattgttcccagtgagtggcttgatatcacccatct 940 Query: 244 tgatcatg 251 |||||||| Sbjct: 939 tgatcatg 932
>ref|XM_450976.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1416 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/48 (87%) Strand = Plus / Minus Query: 237 cccatcttgatcatgccttccacgaagtccgcgaagaaggcgctctgg 284 |||||||||||||| ||||| |||||| || ||||||||||| |||| Sbjct: 1104 cccatcttgatcatcccttcgacgaaggccctgaagaaggcgccctgg 1057
>ref|NM_193315.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 48.1 bits (24), Expect = 0.018 Identities = 57/68 (83%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagatatctcccatct 243 |||||||||| |||||||||| |||||| || |||||||||||||| | ||||||| Sbjct: 991 tcctgcagttggtcctgacctcgccgttgccgccggtgagcggcgagatgttgcccatct 932 Query: 244 tgatcatg 251 ||| |||| Sbjct: 931 tgaccatg 924
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/48 (87%) Strand = Plus / Plus Query: 237 cccatcttgatcatgccttccacgaagtccgcgaagaaggcgctctgg 284 |||||||||||||| ||||| |||||| || ||||||||||| |||| Sbjct: 17878398 cccatcttgatcatcccttcgacgaaggccctgaagaaggcgccctgg 17878445
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.018 Identities = 57/68 (83%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagatatctcccatct 243 |||||||||| |||||||||| |||||| || |||||||||||||| | ||||||| Sbjct: 20062244 tcctgcagttggtcctgacctcgccgttgccgccggtgagcggcgagatgttgcccatct 20062185 Query: 244 tgatcatg 251 ||| |||| Sbjct: 20062184 tgaccatg 20062177
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 48.1 bits (24), Expect = 0.018 Identities = 57/68 (83%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagatatctcccatct 243 |||||||||| |||||||||| |||||| || |||||||||||||| | ||||||| Sbjct: 60206 tcctgcagttggtcctgacctcgccgttgccgccggtgagcggcgagatgttgcccatct 60147 Query: 244 tgatcatg 251 ||| |||| Sbjct: 60146 tgaccatg 60139
>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_B06 Length = 106678 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/48 (87%) Strand = Plus / Plus Query: 237 cccatcttgatcatgccttccacgaagtccgcgaagaaggcgctctgg 284 |||||||||||||| ||||| |||||| || ||||||||||| |||| Sbjct: 29217 cccatcttgatcatcccttcgacgaaggccctgaagaaggcgccctgg 29264
>dbj|AK105363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E09, full insert sequence Length = 1391 Score = 48.1 bits (24), Expect = 0.018 Identities = 57/68 (83%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagatatctcccatct 243 |||||||||| |||||||||| |||||| || |||||||||||||| | ||||||| Sbjct: 1070 tcctgcagttggtcctgacctcgccgttgccgccggtgagcggcgagatgttgcccatct 1011 Query: 244 tgatcatg 251 ||| |||| Sbjct: 1010 tgaccatg 1003
>dbj|AK069281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011F14, full insert sequence Length = 1415 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/48 (87%) Strand = Plus / Minus Query: 237 cccatcttgatcatgccttccacgaagtccgcgaagaaggcgctctgg 284 |||||||||||||| ||||| |||||| || ||||||||||| |||| Sbjct: 1103 cccatcttgatcatcccttcgacgaaggccctgaagaaggcgccctgg 1056
>tpe|BN000651.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx122 gene for class III peroxidase 122 precursor, exons 1-3 Length = 2745 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/48 (87%) Strand = Plus / Minus Query: 237 cccatcttgatcatgccttccacgaagtccgcgaagaaggcgctctgg 284 |||||||||||||| ||||| |||||| || ||||||||||| |||| Sbjct: 2618 cccatcttgatcatcccttcgacgaaggccctgaagaaggcgccctgg 2571
>tpe|BN000546.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx17 gene for class III peroxidase 17 precursor, exons 1-4 Length = 4115 Score = 48.1 bits (24), Expect = 0.018 Identities = 57/68 (83%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagatatctcccatct 243 |||||||||| |||||||||| |||||| || |||||||||||||| | ||||||| Sbjct: 4095 tcctgcagttggtcctgacctcgccgttgccgccggtgagcggcgagatgttgcccatct 4036 Query: 244 tgatcatg 251 ||| |||| Sbjct: 4035 tgaccatg 4028
>ref|NM_119806.2| Arabidopsis thaliana peroxidase AT4G36430 mRNA, complete cds Length = 1215 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 agttaatcttcctgcagttcttcctga 201 |||||||||||||||| |||||||||| Sbjct: 1040 agttaatcttcctgcaattcttcctga 1014
>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2 Length = 198354 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 agttaatcttcctgcagttcttcctga 201 |||||||||||||||| |||||||||| Sbjct: 164766 agttaatcttcctgcaattcttcctga 164740
>gb|AY117238.1| Arabidopsis thaliana putative peroxidase (At4g36430) mRNA, complete cds Length = 1027 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 agttaatcttcctgcagttcttcctga 201 |||||||||||||||| |||||||||| Sbjct: 991 agttaatcttcctgcaattcttcctga 965
>gb|AY074296.1| Arabidopsis thaliana putative peroxidase (At4g36430) mRNA, complete cds Length = 1231 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 agttaatcttcctgcagttcttcctga 201 |||||||||||||||| |||||||||| Sbjct: 1040 agttaatcttcctgcaattcttcctga 1014
>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85 Length = 198750 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Plus Query: 175 agttaatcttcctgcagttcttcctga 201 |||||||||||||||| |||||||||| Sbjct: 85962 agttaatcttcctgcaattcttcctga 85988
>emb|AJ286345.1|ATH286345 Arabidopsis thaliana mRNA for peroxidase (DiDi 6G-3b gene) Length = 1126 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 agttaatcttcctgcagttcttcctga 201 |||||||||||||||| |||||||||| Sbjct: 992 agttaatcttcctgcaattcttcctga 966
>emb|BX827705.1|CNS0A2ET Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1112 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 agttaatcttcctgcagttcttcctga 201 |||||||||||||||| |||||||||| Sbjct: 1029 agttaatcttcctgcaattcttcctga 1003
>gb|AF452384.1| Arabidopsis thaliana class III peroxidase ATP31 mRNA, complete cds Length = 1145 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 agttaatcttcctgcagttcttcctga 201 |||||||||||||||| |||||||||| Sbjct: 1028 agttaatcttcctgcaattcttcctga 1002
>gb|AY506493.1| Triticum aestivum PXB5-like gene, complete sequence Length = 1198 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Minus Query: 214 tccctgtgagcggcgagatatctcccatcttgatcatg 251 |||| |||||||||| ||| | |||||||||||||||| Sbjct: 1152 tcccggtgagcggcgcgatgtttcccatcttgatcatg 1115
>gb|AY506492.1| Triticum aestivum PXB4-like gene, complete sequence Length = 1196 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Minus Query: 214 tccctgtgagcggcgagatatctcccatcttgatcatg 251 |||| |||||||||| ||| | |||||||||||||||| Sbjct: 1152 tcccggtgagcggcgcgatgtttcccatcttgatcatg 1115
>gb|AY506485.1| Triticum aestivum PXCW3-like gene, complete sequence Length = 2466 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Minus Query: 214 tccctgtgagcggcgagatatctcccatcttgatcatg 251 |||| |||||||||| ||| | |||||||||||||||| Sbjct: 1812 tcccggtgagcggcgcgatgtttcccatcttgatcatg 1775
>gb|AY506484.1| Triticum aestivum PXCW2-like gene, complete sequence Length = 2456 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Minus Query: 214 tccctgtgagcggcgagatatctcccatcttgatcatg 251 |||| |||||||||| ||| | |||||||||||||||| Sbjct: 1803 tcccggtgagcggcgcgatgtttcccatcttgatcatg 1766
>gb|AY857757.1| Triticum monococcum peroxidase 3 (POX3) mRNA, complete cds Length = 1295 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Minus Query: 214 tccctgtgagcggcgagatatctcccatcttgatcatg 251 |||| |||||||||| ||| | |||||||||||||||| Sbjct: 962 tcccggtgagcggcgcgatgtttcccatcttgatcatg 925
>emb|X53675.1|TAPEROXIG Wheat (T. aesitvum) mRNA for peroxidase (EC 1.11.1.7) Length = 3240 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Minus Query: 214 tccctgtgagcggcgagatatctcccatcttgatcatg 251 |||| |||||||||| ||| | |||||||||||||||| Sbjct: 2494 tcccggtgagcggcgcgatgtttcccatcttgatcatg 2457
>emb|X85228.1|TAPOX2 T.aestivum pox2 gene Length = 1658 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Minus Query: 214 tccctgtgagcggcgagatatctcccatcttgatcatg 251 |||| |||||||||| ||| | |||||||||||||||| Sbjct: 1362 tcccggtgagcggcgcgatgtttcccatcttgatcatg 1325
>gb|AF387866.1| Triticum aestivum peroxidase (pxc1A) gene, pxc1A-2A allele, complete cds Length = 2458 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Minus Query: 214 tccctgtgagcggcgagatatctcccatcttgatcatg 251 |||| |||||||||| ||| | |||||||||||||||| Sbjct: 1806 tcccggtgagcggcgcgatgtttcccatcttgatcatg 1769
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 302 gaccagcgggtcggtggccccgccgt 327 ||||||||||||| |||||||||||| Sbjct: 2234680 gaccagcgggtcgttggccccgccgt 2234705
>gb|AF078872.1|AF078872 Avena sativa cultivar Ogle peroxidase PXC6 precursor (pxc6) gene, complete cds Length = 1197 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 222 agcggcgagatatctcccatcttgatcatg 251 ||||||||||| | |||||||||||||||| Sbjct: 1142 agcggcgagatgtttcccatcttgatcatg 1113
>gb|AF078871.1|AF078871 Avena sativa cultivar Ogle peroxidase PXC2 precursor (pxc2) gene, complete cds Length = 1191 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 222 agcggcgagatatctcccatcttgatcatg 251 ||||||||||| | |||||||||||||||| Sbjct: 1136 agcggcgagatgtttcccatcttgatcatg 1107
>gb|AY506488.1| Triticum aestivum PXA2-like gene, complete sequence Length = 1165 Score = 42.1 bits (21), Expect = 1.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 214 tccctgtgagcggcgagatatctcccatcttgatcat 250 |||| |||||||||| ||| | ||||||||||||||| Sbjct: 1121 tcccggtgagcggcgcgatgtttcccatcttgatcat 1085
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagat 232 ||||||||||| |||||| ||| ||||||| || |||||||| ||||| Sbjct: 67614 tcctgcagttcatcctgatctcgccgttgtggccggtgagcggggagat 67566
>emb|AJ544515.1|AOF544515 Asparagus officinalis partial mRNA for peroxidase (prx2 gene) Length = 1041 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 atatctcccatcttgatcatg 251 ||||||||||||||||||||| Sbjct: 848 atatctcccatcttgatcatg 828
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagat 232 ||||||||||| |||||| ||| ||||||| || |||||||| ||||| Sbjct: 20964382 tcctgcagttcatcctgatctcgccgttgtggccggtgagcggggagat 20964334
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 171 tcttagttaatcttcctgcagttcttcctgacctctccgtt 211 ||||| |||||| | |||||||||||||||| ||| ||||| Sbjct: 624903 tcttaattaatccttctgcagttcttcctgatctccccgtt 624863 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cttcctgcagttcttcctga 201 |||||||||||||||||||| Sbjct: 614836 cttcctgcagttcttcctga 614817
>dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F11, full insert sequence Length = 1351 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagat 232 ||||||||||| |||||| ||| ||||||| || |||||||| ||||| Sbjct: 1103 tcctgcagttcatcctgatctcgccgttgtggccggtgagcggggagat 1055
>dbj|AK069456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E08, full insert sequence Length = 1319 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 171 tcttagttaatcttcctgcagttcttcctgacctctccgtt 211 ||||| |||||| | |||||||||||||||| ||| ||||| Sbjct: 1109 tcttaattaatccttctgcagttcttcctgatctccccgtt 1069
>tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx54 gene for class III peroxidase 54 precursor, exon 1 Length = 1038 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagat 232 ||||||||||| |||||| ||| ||||||| || |||||||| ||||| Sbjct: 1021 tcctgcagttcatcctgatctcgccgttgtggccggtgagcggggagat 973
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 171 tcttagttaatcttcctgcagttcttcctgacctctccgtt 211 ||||| |||||| | |||||||||||||||| ||| ||||| Sbjct: 624903 tcttaattaatccttctgcagttcttcctgatctccccgtt 624863 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cttcctgcagttcttcctga 201 |||||||||||||||||||| Sbjct: 614836 cttcctgcagttcttcctga 614817
>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04, complete sequence Length = 140890 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagat 232 ||||||||||| |||||| ||| ||||||| || |||||||| ||||| Sbjct: 9788 tcctgcagttcatcctgatctcgccgttgtggccggtgagcggggagat 9740
>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115859 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 171 tcttagttaatcttcctgcagttcttcctgacctctccgtt 211 ||||| |||||| | |||||||||||||||| ||| ||||| Sbjct: 23940 tcttaattaatccttctgcagttcttcctgatctccccgtt 23980 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cttcctgcagttcttcctga 201 |||||||||||||||||||| Sbjct: 34007 cttcctgcagttcttcctga 34026
>gb|BC101863.1| Rattus norvegicus similar to a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 10, mRNA (cDNA clone MGC:124747 IMAGE:7939411), complete cds Length = 1932 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 719 atctctcactccacaggctgtgtc 696
>gb|AF163762.1| Homo sapiens zinc metalloendopeptidase (ADAMTS10) mRNA, partial cds Length = 3400 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 516 atctctcactccacaggctgtgtc 493
>gb|BC062489.1| Xenopus tropicalis kelch domain containing 4, mRNA (cDNA clone IMAGE:5379822), partial cds Length = 1134 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 atggatctctcactccacac 142 |||||||||||||||||||| Sbjct: 273 atggatctctcactccacac 292
>ref|NM_001034930.1| Rattus norvegicus similar to a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 10 (LOC314655), mRNA Length = 1932 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 719 atctctcactccacaggctgtgtc 696
>ref|NM_185795.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 939 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ctgcagttcttcctgacctc 205 |||||||||||||||||||| Sbjct: 923 ctgcagttcttcctgacctc 904
>ref|XM_590783.2| PREDICTED: Bos taurus similar to ADAM metallopeptidase with thrombospondin type 1 motif, 10 preproprotein, transcript variant 1 (LOC513140), mRNA Length = 3601 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 688 atctctcactccacaggctgtgtc 665
>ref|XM_883027.1| PREDICTED: Bos taurus similar to ADAM metallopeptidase with thrombospondin type 1 motif, 10 preproprotein, transcript variant 3 (LOC513140), mRNA Length = 3655 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 688 atctctcactccacaggctgtgtc 665
>ref|NM_030957.2| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 10 (ADAMTS10), mRNA Length = 4237 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 868 atctctcactccacaggctgtgtc 845
>gb|BC082773.1| Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10, mRNA (cDNA clone IMAGE:6511555), containing frame-shift errors Length = 4140 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 748 atctctcactccacaggctgtgtc 725
>gb|BC056427.1| Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10, mRNA (cDNA clone IMAGE:5698210), containing frame-shift errors Length = 4027 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 726 atctctcactccacaggctgtgtc 703
>ref|XM_993386.1| PREDICTED: Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 (Adamts10), mRNA Length = 3766 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 736 atctctcactccacaggctgtgtc 713
>ref|XM_905505.1| PREDICTED: Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 (Adamts10), mRNA Length = 4039 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 736 atctctcactccacaggctgtgtc 713
>ref|XM_989486.1| PREDICTED: Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 (Adamts10), mRNA Length = 4039 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 736 atctctcactccacaggctgtgtc 713
>gb|AC005165.1| Homo sapiens BAC clone CTA-242H14 from 7, complete sequence Length = 155164 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 atcatgccttccacgaagtc 265 |||||||||||||||||||| Sbjct: 41785 atcatgccttccacgaagtc 41766
>gb|BC100558.1| Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10, mRNA (cDNA clone IMAGE:5143430), complete cds Length = 909 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 510 atctctcactccacaggctgtgtc 487
>ref|NM_172619.2| Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 (Adamts10), mRNA Length = 3731 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 728 atctctcactccacaggctgtgtc 705
>emb|AL008735.2|HS433G19 Human DNA sequence from clone RP3-433G19 on chromosome 1q23.2-25.1 Contains part of the gene for expressed in hematopoietic cells (heart, liver) (HLL), complete sequence Length = 38565 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 atcttgatcatgccttccac 259 |||||||||||||||||||| Sbjct: 35480 atcttgatcatgccttccac 35499
>gb|AC092034.2| Homo sapiens chromosome 3 clone RP11-48N23, complete sequence Length = 154084 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 taatcttcctgcagttcttc 197 |||||||||||||||||||| Sbjct: 19665 taatcttcctgcagttcttc 19684
>dbj|AK042525.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730001E07 product:ADAMTS-10 PRECURSOR (EC 3.4.24.-) (A DISINTEGRIN AND METALLOPROTEINASE WITH THROMBOSPONDIN MOTIFS 10) (ADAM-TS 10) (ADAM-TS10) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3983 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 744 atctctcactccacaggctgtgtc 721
>dbj|AK034565.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430006O18 product:a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 10, full insert sequence Length = 1799 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 731 atctctcactccacaggctgtgtc 708
>dbj|AK076334.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732442E24 product:ADAMTS-10 PRECURSOR (EC 3.4.24.-) (A DISINTEGRIN AND METALLOPROTEINASE WITH THROMBOSPONDIN MOTIFS 10) (ADAM-TS 10) (ADAM-TS10) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3328 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 730 atctctcactccacaggctgtgtc 707
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cttcctgcagttcttcctga 201 |||||||||||||||||||| Sbjct: 571863 cttcctgcagttcttcctga 571844
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ctgcagttcttcctgacctc 205 |||||||||||||||||||| Sbjct: 9337087 ctgcagttcttcctgacctc 9337106
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ctgcagttcttcctgacctc 205 |||||||||||||||||||| Sbjct: 104428 ctgcagttcttcctgacctc 104447
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ctgcagttcttcctgacctc 205 |||||||||||||||||||| Sbjct: 65497 ctgcagttcttcctgacctc 65516
>dbj|AK108385.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-E11, full insert sequence Length = 1139 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cttcctgcagttcttcctga 201 |||||||||||||||||||| Sbjct: 968 cttcctgcagttcttcctga 949
>gb|AY111736.1| Zea mays CL32526_1 mRNA sequence Length = 820 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cctgcagttcttcctgacct 204 |||||||||||||||||||| Sbjct: 503 cctgcagttcttcctgacct 484
>dbj|AK060295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-E04, full insert sequence Length = 1198 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ctgcagttcttcctgacctc 205 |||||||||||||||||||| Sbjct: 1041 ctgcagttcttcctgacctc 1022
>emb|AL591401.5| Zebrafish DNA sequence from clone BUSM1-175P12 in linkage group 7, complete sequence Length = 84068 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 ttgcaacaaagcatggatct 130 |||||||||||||||||||| Sbjct: 48653 ttgcaacaaagcatggatct 48634
>gb|AY105520.1| Zea mays PCO080795 mRNA sequence Length = 1346 Score = 40.1 bits (20), Expect = 4.3 Identities = 56/68 (82%) Strand = Plus / Minus Query: 184 tcctgcagttcttcctgacctctccgttgttccctgtgagcggcgagatatctcccatct 243 |||||||||| | ||||| ||| ||| | |||| |||||||||||||| | ||||||| Sbjct: 1094 tcctgcagttgtgcctgatctcgccggcgctcccggtgagcggcgagatgttgcccatct 1035 Query: 244 tgatcatg 251 ||| |||| Sbjct: 1034 tgaccatg 1027
>tpe|BN000665.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx136 gene for class III peroxidase 136 precursor, exons 1-4 Length = 1530 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cttcctgcagttcttcctga 201 |||||||||||||||||||| Sbjct: 1521 cttcctgcagttcttcctga 1502
>tpe|BN000660.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx131 gene for class III peroxidase 131 precursor, exons 1-4 Length = 1528 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cttcctgcagttcttcctga 201 |||||||||||||||||||| Sbjct: 1519 cttcctgcagttcttcctga 1500
>tpe|BN000606.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx77 gene for class III peroxidase 77 precursor, exons 1-4 Length = 1901 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ctgcagttcttcctgacctc 205 |||||||||||||||||||| Sbjct: 1885 ctgcagttcttcctgacctc 1866
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cttcctgcagttcttcctga 201 |||||||||||||||||||| Sbjct: 571863 cttcctgcagttcttcctga 571844
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cttcctgcagttcttcctga 201 |||||||||||||||||||| Sbjct: 171109 cttcctgcagttcttcctga 171128
>dbj|AB209515.1| Homo sapiens mRNA for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 10 preproprotein variant protein Length = 3423 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atctctcactccacacgctgtgtc 150 ||||||||||||||| |||||||| Sbjct: 731 atctctcactccacaggctgtgtc 708 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,207,598 Number of Sequences: 3902068 Number of extensions: 2207598 Number of successful extensions: 38215 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37955 Number of HSP's gapped (non-prelim): 260 length of query: 329 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 307 effective length of database: 17,147,199,772 effective search space: 5264190330004 effective search space used: 5264190330004 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)