ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart53f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ219479.1| wheat putative xylanase inhibitor mRNA, partial cds 44 0.035
2emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 ... 42 0.14
3emb|AL671975.12| Mouse DNA sequence from clone RP23-25O15 on chr... 42 0.14
4gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complet... 40 0.55
5gb|AC117212.5| Mus musculus BAC clone RP23-302A24 from chromosom... 40 0.55
6emb|AL391845.49| Human DNA sequence from clone RP11-547D24 on ch... 40 0.55
7emb|AL034562.3|HS684O24 Human DNA sequence from clone RP4-684O24... 40 0.55
8gb|AC162038.6| Mus musculus 6 BAC RP24-576J4 (Roswell Park Cance... 40 0.55
9dbj|AK090681.1| Homo sapiens cDNA FLJ33362 fis, clone BRACE2005337 40 0.55
10gb|AC155173.3| Mus musculus BAC clone RP23-72O23 from chromosome... 40 0.55
11gb|AC084327.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 0.55
12emb|AJ327330.1|HSA327330 Homo sapiens genomic sequence surroundi... 40 0.55
13gb|AC155330.3| Mus musculus 6 BAC RP24-146L23 (Roswell Park Canc... 40 0.55
14gb|AC009749.9| Drosophila melanogaster clone BACR40I04, complete... 38 2.2
15gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome... 38 2.2
16gb|AC163684.5| Mus musculus BAC clone RP23-8N10 from chromosome ... 38 2.2
17gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome... 38 2.2
18gb|AC106834.9| Mus musculus chromosome 19, clone RP24-132H7, com... 38 2.2
19gb|AC133496.3| Mus musculus BAC clone RP24-386G2 from chromosome... 38 2.2
20gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, c... 38 2.2
21gb|AC121927.2| Mus musculus BAC clone RP24-202N20 from 10, compl... 38 2.2
22gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 gen... 38 2.2
23gb|AC093277.3| Homo sapiens chromosome 5 clone RP11-386E5, compl... 38 2.2
24gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 geno... 38 2.2
25gb|AC154618.2| Mus musculus BAC clone RP23-321M11 from chromosom... 38 2.2
26dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 2.2
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 2.2
28gb|AC009845.7|AC009845 Drosophila melanogaster, chromosome 2L, r... 38 2.2
29dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 38 2.2
30gb|AE003575.5| Drosophila melanogaster chromosome 2L, section 16... 38 2.2
31gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 2.2
32emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chr... 38 2.2
33emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chro... 38 2.2
34gb|AF285624.1| Bromus sterilis microsatellite AS147 sequence 36 8.6
35gb|AC099624.6| Mus musculus chromosome 15, clone RP24-404E2, com... 36 8.6
36gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, comp... 36 8.6
37gb|AC115022.11| Mus musculus chromosome 7, clone RP24-233J11, co... 36 8.6
38gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, com... 36 8.6
39gb|AF130342.2| Homo sapiens chromosome 8, complete sequence 36 8.6
40gb|AC163038.5| Mus musculus BAC clone RP23-180A14 from chromosom... 36 8.6
41gb|AC124517.4| Mus musculus BAC clone RP23-387K15 from chromosom... 36 8.6
42gb|AC127591.4| Mus musculus BAC clone RP23-315I14 from chromosom... 36 8.6
43emb|CR812472.9| Zebrafish DNA sequence from clone DKEY-110G7 in ... 36 8.6
44gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosom... 36 8.6
45ref|NM_032957.3| Homo sapiens regulator of telomere elongation h... 36 8.6
46emb|AL353715.21| Human DNA sequence from clone CTD-3184A7 on chr... 36 8.6
47emb|AL354712.18| Human DNA sequence from clone RP4-597A16 on chr... 36 8.6
48gb|AC108704.3| Homo sapiens 12 BAC RP11-21K12 (Roswell Park Canc... 36 8.6
49gb|AC109542.6| Rattus norvegicus 1 BAC CH230-270O15 (Children's ... 36 8.6
50ref|XM_775656.1| PREDICTED: Strongylocentrotus purpuratus simila... 36 8.6
51emb|CR857704.1| Pongo pygmaeus mRNA; cDNA DKFZp459B161 (from clo... 36 8.6
52emb|AL080127.1|HSM800638 Homo sapiens mRNA; cDNA DKFZp434C013 (f... 36 8.6
53dbj|AB029011.2| Homo sapiens mRNA for KIAA1088 protein, partial cds 36 8.6
54gb|AF384093.1| Bostrychia calliptera isolate C3191.CO internal t... 36 8.6
55gb|AF384092.1| Bostrychia calliptera isolate C3400.MX internal t... 36 8.6
56gb|AC112225.4| Homo sapiens BAC clone RP13-488H8 from 4, complet... 36 8.6
57gb|AC007381.3| Homo sapiens BAC clone RP11-158I21 from 2, comple... 36 8.6
58gb|AC104595.6| Homo sapiens BAC clone CTD-2026H6 from 2, complet... 36 8.6
59dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 36 8.6
60gb|AF134110.1|AF134110 Excellospora viridilutea 16S-23S ribosoma... 36 8.6
61dbj|AK000485.1| Homo sapiens cDNA FLJ20478 fis, clone KAT07359 36 8.6
62dbj|AK131105.1| Homo sapiens mRNA for FLJ00362 protein 36 8.6
63gb|AF217796.1|AF217796 Homo sapiens SCG10 like-protein, helicase... 36 8.6
64gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, comple... 36 8.6
65emb|AL391153.3|CNS06C7Z Human chromosome 14 DNA sequence BAC C-2... 36 8.6
66emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in... 36 8.6
67gb|AC111011.6| Mus musculus BAC clone RP23-424D18 from 1, comple... 36 8.6
68emb|AL611985.22| Mouse DNA sequence from clone RP23-421E12 on ch... 36 8.6
69emb|AL683897.5| Mouse DNA sequence from clone RP23-208E23 on chr... 36 8.6
70emb|AL845165.4| Mouse DNA sequence from clone RP23-281N9 on chro... 36 8.6 
>gb|DQ219479.1| wheat putative xylanase inhibitor mRNA, partial cds
          Length = 347

 Score = 44.1 bits (22), Expect = 0.035
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 32  gcatgcaacaaacgatgtggat 53
           ||||||||||||||||||||||
Sbjct: 329 gcatgcaacaaacgatgtggat 308
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>emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 in linkage group 10,
             complete sequence
          Length = 121560

 Score = 42.1 bits (21), Expect = 0.14
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 20    cacacacagcatgcatgcaacaaac 44
             ||||||||||||||||||| |||||
Sbjct: 57123 cacacacagcatgcatgcatcaaac 57147
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>emb|AL671975.12| Mouse DNA sequence from clone RP23-25O15 on chromosome X, complete
            sequence
          Length = 231530

 Score = 42.1 bits (21), Expect = 0.14
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 18   ggcacacacagcatgcatgca 38
            |||||||||||||||||||||
Sbjct: 2327 ggcacacacagcatgcatgca 2307
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>gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complete sequence
          Length = 193861

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   gcacacacagcatgcatgca 38
            ||||||||||||||||||||
Sbjct: 6816 gcacacacagcatgcatgca 6835
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>gb|AC117212.5| Mus musculus BAC clone RP23-302A24 from chromosome 6, complete sequence
          Length = 212735

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aaagccctggcacacacagc 29
             ||||||||||||||||||||
Sbjct: 63506 aaagccctggcacacacagc 63525
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>emb|AL391845.49| Human DNA sequence from clone RP11-547D24 on chromosome 1 Contains the
             3' end of a novel gene (LOC339459), the GABRD gene for
             gamma-aminobutyric acid (GABA) A receptor delta, two novel
             genes the 5' end of the PRKCZ gene for protein kinase C,
             zeta and seven CpG islands, complete sequence
          Length = 132884

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gcacacacagcatgcatgca 38
             ||||||||||||||||||||
Sbjct: 82067 gcacacacagcatgcatgca 82048
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>emb|AL034562.3|HS684O24 Human DNA sequence from clone RP4-684O24 on chromosome 20p12.2-13
             Contains the 3' part of the PTPNS1 gene for protein
             tyrosine phosphatase,non-receptor type substrate 1 and the
             PDYN gene for prodynorphin (Beta-Neoendorphin-Dynorphin
             precursor, Proenkephalin B precursor) genomic marker
             D20S179 and a CA repeat polymorphism, complete sequence
          Length = 103933

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     acataaagccctggcacaca 25
             ||||||||||||||||||||
Sbjct: 45991 acataaagccctggcacaca 45972
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>gb|AC162038.6| Mus musculus 6 BAC RP24-576J4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 175787

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     gcacacacagcatgcatgca 38
              ||||||||||||||||||||
Sbjct: 148391 gcacacacagcatgcatgca 148410
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>dbj|AK090681.1| Homo sapiens cDNA FLJ33362 fis, clone BRACE2005337
          Length = 1807

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   acataaagccctggcacaca 25
           ||||||||||||||||||||
Sbjct: 994 acataaagccctggcacaca 975
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>gb|AC155173.3| Mus musculus BAC clone RP23-72O23 from chromosome 5, complete sequence
          Length = 245443

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gcacacacagcatgcatgca 38
             ||||||||||||||||||||
Sbjct: 45640 gcacacacagcatgcatgca 45621
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>gb|AC084327.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-367K14, complete
             sequence
          Length = 108667

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    aaagccctggcacacacagc 29
             ||||||||||||||||||||
Sbjct: 26688 aaagccctggcacacacagc 26669
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>emb|AJ327330.1|HSA327330 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-GM14R
          Length = 717

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   acataaagccctggcacaca 25
           ||||||||||||||||||||
Sbjct: 241 acataaagccctggcacaca 222
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>gb|AC155330.3| Mus musculus 6 BAC RP24-146L23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 215602

 Score = 40.1 bits (20), Expect = 0.55
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     gcacacacagcatgcatgca 38
              ||||||||||||||||||||
Sbjct: 154044 gcacacacagcatgcatgca 154025
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>gb|AC009749.9| Drosophila melanogaster clone BACR40I04, complete sequence
          Length = 161276

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 25     acagcatgcatgcaacaaa 43
              |||||||||||||||||||
Sbjct: 134755 acagcatgcatgcaacaaa 134737
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>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence
          Length = 179458

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     cacacacagcatgcatgca 38
              |||||||||||||||||||
Sbjct: 122622 cacacacagcatgcatgca 122640
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>gb|AC163684.5| Mus musculus BAC clone RP23-8N10 from chromosome 13, complete sequence
          Length = 234717

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    cacacacagcatgcatgca 38
             |||||||||||||||||||
Sbjct: 61150 cacacacagcatgcatgca 61168
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>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence
          Length = 182190

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    cacacacagcatgcatgca 38
             |||||||||||||||||||
Sbjct: 69913 cacacacagcatgcatgca 69895
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>gb|AC106834.9| Mus musculus chromosome 19, clone RP24-132H7, complete sequence
          Length = 177277

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 13     gccctggcacacacagcatgcat 35
              ||||||||||||| |||||||||
Sbjct: 170984 gccctggcacacaaagcatgcat 171006
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>gb|AC133496.3| Mus musculus BAC clone RP24-386G2 from chromosome 13, complete sequence
          Length = 173924

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 20     cacacacagcatgcatgca 38
              |||||||||||||||||||
Sbjct: 161170 cacacacagcatgcatgca 161152
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>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence
          Length = 245390

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 13    gccctggcacacacagcatgcat 35
             ||||||||||||| |||||||||
Sbjct: 83458 gccctggcacacaaagcatgcat 83480
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>gb|AC121927.2| Mus musculus BAC clone RP24-202N20 from 10, complete sequence
          Length = 164073

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    acacacagcatgcatgcaa 39
             |||||||||||||||||||
Sbjct: 31972 acacacagcatgcatgcaa 31954
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>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete
             sequence
          Length = 153182

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    tggcacacacagcatgcat 35
             |||||||||||||||||||
Sbjct: 12474 tggcacacacagcatgcat 12456
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>gb|AC093277.3| Homo sapiens chromosome 5 clone RP11-386E5, complete sequence
          Length = 58894

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    cacacacagcatgcatgca 38
             |||||||||||||||||||
Sbjct: 29448 cacacacagcatgcatgca 29466
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>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete
             sequence
          Length = 178692

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    tggcacacacagcatgcat 35
             |||||||||||||||||||
Sbjct: 17277 tggcacacacagcatgcat 17295
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>gb|AC154618.2| Mus musculus BAC clone RP23-321M11 from chromosome 14, complete
             sequence
          Length = 209522

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    cacacacagcatgcatgca 38
             |||||||||||||||||||
Sbjct: 36681 cacacacagcatgcatgca 36699
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 17       tggcacacacagcatgcat 35
                |||||||||||||||||||
Sbjct: 17657354 tggcacacacagcatgcat 17657336
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 3        tcaacataaagccctggca 21
                |||||||||||||||||||
Sbjct: 25725350 tcaacataaagccctggca 25725368
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>gb|AC009845.7|AC009845 Drosophila melanogaster, chromosome 2L, region 25A-25B, BAC clone
            BACR04C19, complete sequence
          Length = 183766

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 25   acagcatgcatgcaacaaa 43
            |||||||||||||||||||
Sbjct: 6231 acagcatgcatgcaacaaa 6213
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524E08
          Length = 154696

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     tcaacataaagccctggca 21
             |||||||||||||||||||
Sbjct: 42512 tcaacataaagccctggca 42530
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>gb|AE003575.5| Drosophila melanogaster chromosome 2L, section 16 of 83 of the complete
              sequence
          Length = 330399

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     acagcatgcatgcaacaaa 43
              |||||||||||||||||||
Sbjct: 265311 acagcatgcatgcaacaaa 265329
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 17       tggcacacacagcatgcat 35
                |||||||||||||||||||
Sbjct: 17666394 tggcacacacagcatgcat 17666376
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>emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete
             sequence
          Length = 222471

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    cacacacagcatgcatgca 38
             |||||||||||||||||||
Sbjct: 35478 cacacacagcatgcatgca 35460
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>emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chromosome 15, complete
             sequence
          Length = 236344

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    cacacacagcatgcatgca 38
             |||||||||||||||||||
Sbjct: 99762 cacacacagcatgcatgca 99780
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>gb|AF285624.1| Bromus sterilis microsatellite AS147 sequence
          Length = 230

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 26 cagcatgcatgcaacaaa 43
          ||||||||||||||||||
Sbjct: 69 cagcatgcatgcaacaaa 52
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>gb|AC099624.6| Mus musculus chromosome 15, clone RP24-404E2, complete sequence
          Length = 173877

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 21     acacacagcatgcatgca 38
              ||||||||||||||||||
Sbjct: 104384 acacacagcatgcatgca 104367
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>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence
          Length = 171861

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 21     acacacagcatgcatgca 38
              ||||||||||||||||||
Sbjct: 138968 acacacagcatgcatgca 138951
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>gb|AC115022.11| Mus musculus chromosome 7, clone RP24-233J11, complete sequence
          Length = 150060

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 20    cacacacagcatgcatgc 37
             ||||||||||||||||||
Sbjct: 32606 cacacacagcatgcatgc 32589
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>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence
          Length = 195587

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 21    acacacagcatgcatgca 38
             ||||||||||||||||||
Sbjct: 48738 acacacagcatgcatgca 48721
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>gb|AF130342.2| Homo sapiens chromosome 8, complete sequence
          Length = 349992

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 27     agcatgcatgcaacaaac 44
              ||||||||||||||||||
Sbjct: 156603 agcatgcatgcaacaaac 156620
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>gb|AC163038.5| Mus musculus BAC clone RP23-180A14 from chromosome 13, complete sequence
          Length = 213865

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 20     cacacacagcatgcatgcaaca 41
              |||||||| |||||||||||||
Sbjct: 126163 cacacacatcatgcatgcaaca 126142
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>gb|AC124517.4| Mus musculus BAC clone RP23-387K15 from chromosome 13, complete
             sequence
          Length = 198825

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 17    tggcacacacagcatgcatgca 38
             |||||| |||||||||||||||
Sbjct: 76912 tggcactcacagcatgcatgca 76891
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>gb|AC127591.4| Mus musculus BAC clone RP23-315I14 from chromosome 15, complete
             sequence
          Length = 182619

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 21    acacacagcatgcatgca 38
             ||||||||||||||||||
Sbjct: 99137 acacacagcatgcatgca 99154
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>emb|CR812472.9| Zebrafish DNA sequence from clone DKEY-110G7 in linkage group 3, complete
              sequence
          Length = 194804

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 23     acacagcatgcatgcaac 40
              ||||||||||||||||||
Sbjct: 127485 acacagcatgcatgcaac 127502
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>gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosome 13, complete
            sequence
          Length = 178725

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 17   tggcacacacagcatgcatgca 38
            |||||| |||||||||||||||
Sbjct: 5525 tggcactcacagcatgcatgca 5546
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>ref|NM_032957.3| Homo sapiens regulator of telomere elongation helicase 1 (RTEL1),
            transcript variant 2, mRNA
          Length = 4651

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 12   agccctggcacacacagc 29
            ||||||||||||||||||
Sbjct: 4082 agccctggcacacacagc 4065
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>emb|AL353715.21| Human DNA sequence from clone CTD-3184A7 on chromosome 20 Contains the
             5' end of the GMEB2 gene for glucocorticoid modulatory
             element binding protein 2, the gene for SCG10-like protein
             (SCLIP) (ortholog of rabbit neuroplasticin-2 (NPC2)), the
             TNFRSF6B gene for member 6 (decoy) of tumor necrosis
             factor receptor superfamily, a novel gene and four CpG
             islands, complete sequence
          Length = 92458

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 12    agccctggcacacacagc 29
             ||||||||||||||||||
Sbjct: 91522 agccctggcacacacagc 91505
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>emb|AL354712.18| Human DNA sequence from clone RP4-597A16 on chromosome 1p36.13-36.23
             Contains the 5' end of a novel leucine rich repeat domain
             containing protein, a novel gene, a pseudogene similar to
             part of WD repeat domain, the 5' end of the gene for lung
             type-I cell membrane-associated glycoprotein (T1A-2) and a
             CpG island, complete sequence
          Length = 123288

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 15    cctggcacacacagcatg 32
             ||||||||||||||||||
Sbjct: 10883 cctggcacacacagcatg 10866
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>gb|AC108704.3| Homo sapiens 12 BAC RP11-21K12 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 117432

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 21   acacacagcatgcatgca 38
            ||||||||||||||||||
Sbjct: 4094 acacacagcatgcatgca 4077
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>gb|AC109542.6| Rattus norvegicus 1 BAC CH230-270O15 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 246913

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    gcacacacagcatgcatg 36
             ||||||||||||||||||
Sbjct: 39679 gcacacacagcatgcatg 39662
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>ref|XM_775656.1| PREDICTED: Strongylocentrotus purpuratus similar to
           sporulation-induced transcript 4-associated protein
           (LOC575241), mRNA
          Length = 4368

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 25  acagcatgcatgcaacaa 42
           ||||||||||||||||||
Sbjct: 227 acagcatgcatgcaacaa 210
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>emb|CR857704.1| Pongo pygmaeus mRNA; cDNA DKFZp459B161 (from clone DKFZp459B161)
          Length = 4760

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 12   agccctggcacacacagc 29
            ||||||||||||||||||
Sbjct: 4070 agccctggcacacacagc 4053
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>emb|AL080127.1|HSM800638 Homo sapiens mRNA; cDNA DKFZp434C013 (from clone DKFZp434C013)
          Length = 2312

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 12   agccctggcacacacagc 29
            ||||||||||||||||||
Sbjct: 1672 agccctggcacacacagc 1655
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>dbj|AB029011.2| Homo sapiens mRNA for KIAA1088 protein, partial cds
          Length = 4945

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 12   agccctggcacacacagc 29
            ||||||||||||||||||
Sbjct: 3739 agccctggcacacacagc 3722
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>gb|AF384093.1| Bostrychia calliptera isolate C3191.CO internal transcribed spacer
           1, partial sequence
          Length = 604

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 25  acagcatgcatgcaacaa 42
           ||||||||||||||||||
Sbjct: 163 acagcatgcatgcaacaa 146
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>gb|AF384092.1| Bostrychia calliptera isolate C3400.MX internal transcribed spacer
           1, partial sequence
          Length = 608

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 25  acagcatgcatgcaacaa 42
           ||||||||||||||||||
Sbjct: 163 acagcatgcatgcaacaa 146
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>gb|AC112225.4| Homo sapiens BAC clone RP13-488H8 from 4, complete sequence
          Length = 110961

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     ataaagccctggcacaca 25
             ||||||||||||||||||
Sbjct: 23311 ataaagccctggcacaca 23328
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>gb|AC007381.3| Homo sapiens BAC clone RP11-158I21 from 2, complete sequence
          Length = 152081

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 16    ctggcacacacagcatgc 33
             ||||||||||||||||||
Sbjct: 91266 ctggcacacacagcatgc 91283
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>gb|AC104595.6| Homo sapiens BAC clone CTD-2026H6 from 2, complete sequence
          Length = 45334

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 27    agcatgcatgcaacaaac 44
             ||||||||||||||||||
Sbjct: 12296 agcatgcatgcaacaaac 12313
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 1      tttcaacataaagccctg 18
              ||||||||||||||||||
Sbjct: 444617 tttcaacataaagccctg 444600
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>gb|AF134110.1|AF134110 Excellospora viridilutea 16S-23S ribosomal RNA intergenic spacer
          region, partial sequence
          Length = 418

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 20 cacacacagcatgcatgc 37
          ||||||||||||||||||
Sbjct: 54 cacacacagcatgcatgc 37
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>dbj|AK000485.1| Homo sapiens cDNA FLJ20478 fis, clone KAT07359
          Length = 2338

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 12   agccctggcacacacagc 29
            ||||||||||||||||||
Sbjct: 1769 agccctggcacacacagc 1752
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>dbj|AK131105.1| Homo sapiens mRNA for FLJ00362 protein
          Length = 5314

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 12   agccctggcacacacagc 29
            ||||||||||||||||||
Sbjct: 3221 agccctggcacacacagc 3204
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>gb|AF217796.1|AF217796 Homo sapiens SCG10 like-protein, helicase-like protein NHL, M68, and
             ADP-ribosylation factor related protein 1 (ARFRP1) genes,
             complete cds
          Length = 114793

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 12    agccctggcacacacagc 29
             ||||||||||||||||||
Sbjct: 84639 agccctggcacacacagc 84622
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>gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, complete sequence
          Length = 171846

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 19    gcacacacagcatgcatg 36
             ||||||||||||||||||
Sbjct: 33397 gcacacacagcatgcatg 33414
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>emb|AL391153.3|CNS06C7Z Human chromosome 14 DNA sequence BAC C-2576L4 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172336

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 14    ccctggcacacacagcat 31
             ||||||||||||||||||
Sbjct: 70449 ccctggcacacacagcat 70466
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>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22,
             complete sequence
          Length = 209223

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 20    cacacacagcatgcatgc 37
             ||||||||||||||||||
Sbjct: 90612 cacacacagcatgcatgc 90595
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>gb|AC111011.6| Mus musculus BAC clone RP23-424D18 from 1, complete sequence
          Length = 201846

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     tggcacacacagcatgca 34
              ||||||||||||||||||
Sbjct: 113463 tggcacacacagcatgca 113480
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>emb|AL611985.22| Mouse DNA sequence from clone RP23-421E12 on chromosome 4, complete
              sequence
          Length = 219205

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 21     acacacagcatgcatgca 38
              ||||||||||||||||||
Sbjct: 157360 acacacagcatgcatgca 157377
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>emb|AL683897.5| Mouse DNA sequence from clone RP23-208E23 on chromosome 2, complete
              sequence
          Length = 187308

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 9      taaagccctggcacacacagca 30
              |||||||| |||||||||||||
Sbjct: 184825 taaagcccaggcacacacagca 184846
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>emb|AL845165.4| Mouse DNA sequence from clone RP23-281N9 on chromosome 2, complete
             sequence
          Length = 112789

 Score = 36.2 bits (18), Expect = 8.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ggcacacacagcatgcat 35
             ||||||||||||||||||
Sbjct: 77267 ggcacacacagcatgcat 77284


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 638,424
Number of Sequences: 3902068
Number of extensions: 638424
Number of successful extensions: 40349
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40185
Number of HSP's gapped (non-prelim): 164
length of query: 60
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 39
effective length of database: 17,151,101,840
effective search space: 668892971760
effective search space used: 668892971760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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