ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart53f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica culti... 90 6e-15
2dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
3gb|AF296279.1|AF296279 Oryza sativa subsp. japonica class III ch... 90 6e-15
4gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 90 6e-15
5dbj|AK104397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 6e-15
6dbj|AK104202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 6e-15
7dbj|AK104100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 6e-15
8dbj|AK059767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 6e-15
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 90 6e-15
10ref|NM_196498.1| Oryza sativa (japonica cultivar-group) putative... 86 1e-13
11ref|NM_196501.1| Oryza sativa (japonica cultivar-group) putative... 70 6e-09
12dbj|AK119555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
13dbj|AK104292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
14dbj|AK104222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
15dbj|AK099101.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
16dbj|AK060033.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
17emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 42 1.3
18gb|AE005788.1| Caulobacter crescentus CB15 section 114 of 359 of... 42 1.3
19ref|XM_480513.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.1
20ref|XM_530166.1| PREDICTED: Pan troglodytes LOC457198 (LOC457198... 40 5.1
21gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.1
22gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 5.1
23emb|Z98747.1|HS37J18 Human DNA sequence from clone RP1-37J18 on ... 40 5.1
24emb|AL391244.11| Human DNA sequence from clone RP4-758J18 on chr... 40 5.1
25gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswel... 40 5.1
26gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswel... 40 5.1
27gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.1
28gb|BC102258.1| Bos taurus similar to putative breast adenocarcin... 40 5.1
29dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
30dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
31dbj|AK110033.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
32gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78... 40 5.1
33ref|NM_001034550.1| Bos taurus similar to putative breast adenoc... 40 5.1 
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare Clone OSJNBa0061K21 From Chromosome 10,
             complete sequence
          Length = 112721

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                         
Query: 207   gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266
             ||||| |||||||||||||||||||| ||| ||||||| ||    |||||||||  ||| 
Sbjct: 16429 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 16370

                                                                         
Query: 267   tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326
               | ||||||| ||||| ||||||||||| ||||||||||||||   ||||||| ||| |
Sbjct: 16369 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 16310

                                                      
Query: 327   tccttggccgcggcgatgccttggtccggagagagcagccc 367
             ||||| ||  ||||||| || || ||||| |||||||||||
Sbjct: 16309 tccttcgcgccggcgatcccctgctccggcgagagcagccc 16269



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                         
Query: 273   gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
             ||||||||||||||||||||||| || |||||||||||   ||||||| ||| |||||| 
Sbjct: 28815 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 28756

                                                
Query: 333   gccgcggcgatgccttggtccggagagagcagccc 367
             ||  ||||||| || || |||||  ||||||||||
Sbjct: 28755 gctccggcgatcccctgctccggccagagcagccc 28721
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                            
Query: 207      gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266
                ||||| |||||||||||||||||||| ||| ||||||| ||    |||||||||  ||| 
Sbjct: 14076791 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 14076732

                                                                            
Query: 267      tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326
                  | ||||||| ||||| ||||||||||| ||||||||||||||   ||||||| ||| |
Sbjct: 14076731 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 14076672

                                                         
Query: 327      tccttggccgcggcgatgccttggtccggagagagcagccc 367
                ||||| ||  ||||||| || || ||||| |||||||||||
Sbjct: 14076671 tccttcgcgccggcgatcccctgctccggcgagagcagccc 14076631



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                            
Query: 273      gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
                ||||||||||||||||||||||| || |||||||||||   ||||||| ||| |||||| 
Sbjct: 14089177 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 14089118

                                                   
Query: 333      gccgcggcgatgccttggtccggagagagcagccc 367
                ||  ||||||| || || |||||  ||||||||||
Sbjct: 14089117 gctccggcgatcccctgctccggccagagcagccc 14089083
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>gb|AF296279.1|AF296279 Oryza sativa subsp. japonica class III chitinase (chib1) gene,
           complete cds
          Length = 1038

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                       
Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266
           ||||| |||||||||||||||||||| ||| ||||||| ||    |||||||||  ||| 
Sbjct: 914 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 855

                                                                       
Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326
             | ||||||| ||||| ||||||||||| ||||||||||||||   ||||||| ||| |
Sbjct: 854 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 795

                                                    
Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367
           ||||| ||  ||||||| || || ||||| |||||||||||
Sbjct: 794 tccttcgcgccggcgatcccctgctccggcgagagcagccc 754
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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                         
Query: 207   gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266
             ||||| |||||||||||||||||||| ||| ||||||| ||    |||||||||  ||| 
Sbjct: 92920 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 92861

                                                                         
Query: 267   tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326
               | ||||||| ||||| ||||||||||| ||||||||||||||   ||||||| ||| |
Sbjct: 92860 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 92801

                                                      
Query: 327   tccttggccgcggcgatgccttggtccggagagagcagccc 367
             ||||| ||  ||||||| || || ||||| |||||||||||
Sbjct: 92800 tccttcgcgccggcgatcccctgctccggcgagagcagccc 92760



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                          
Query: 273    gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
              ||||||||||||||||||||||| || |||||||||||   ||||||| ||| |||||| 
Sbjct: 105306 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 105247

                                                 
Query: 333    gccgcggcgatgccttggtccggagagagcagccc 367
              ||  ||||||| || || |||||  ||||||||||
Sbjct: 105246 gctccggcgatcccctgctccggccagagcagccc 105212
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>dbj|AK104397.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C10, full
           insert sequence
          Length = 989

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                       
Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266
           ||||| |||||||||||||||||||| ||| ||||||| ||    |||||||||  ||| 
Sbjct: 919 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 860

                                                                       
Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326
             | ||||||| ||||| ||||||||||| ||||||||||||||   ||||||| ||| |
Sbjct: 859 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 800

                                                    
Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367
           ||||| ||  ||||||| || || ||||| |||||||||||
Sbjct: 799 tccttcgcgccggcgatcccctgctccggcgagagcagccc 759
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>dbj|AK104202.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C04, full
           insert sequence
          Length = 1053

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                       
Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266
           ||||| |||||||||||||||||||| ||| ||||||| ||    |||||||||  ||| 
Sbjct: 919 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 860

                                                                       
Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326
             | ||||||| ||||| ||||||||||| ||||||||||||||   ||||||| ||| |
Sbjct: 859 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 800

                                                    
Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367
           ||||| ||  ||||||| || || ||||| |||||||||||
Sbjct: 799 tccttcgcgccggcgatcccctgctccggcgagagcagccc 759
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>dbj|AK104100.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G07, full
           insert sequence
          Length = 1026

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                       
Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266
           ||||| |||||||||||||||||||| ||| ||||||| ||    |||||||||  ||| 
Sbjct: 919 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 860

                                                                       
Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326
             | ||||||| ||||| ||||||||||| ||||||||||||||   ||||||| ||| |
Sbjct: 859 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 800

                                                    
Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367
           ||||| ||  ||||||| || || ||||| |||||||||||
Sbjct: 799 tccttcgcgccggcgatcccctgctccggcgagagcagccc 759
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>dbj|AK059767.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G07, full
           insert sequence
          Length = 1069

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                       
Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266
           ||||| |||||||||||||||||||| ||| ||||||| ||    |||||||||  ||| 
Sbjct: 919 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 860

                                                                       
Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326
             | ||||||| ||||| ||||||||||| ||||||||||||||   ||||||| ||| |
Sbjct: 859 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 800

                                                    
Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367
           ||||| ||  ||||||| || || ||||| |||||||||||
Sbjct: 799 tccttcgcgccggcgatcccctgctccggcgagagcagccc 759
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                            
Query: 207      gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266
                ||||| |||||||||||||||||||| ||| ||||||| ||    |||||||||  ||| 
Sbjct: 14085033 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 14084974

                                                                            
Query: 267      tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326
                  | ||||||| ||||| ||||||||||| ||||||||||||||   ||||||| ||| |
Sbjct: 14084973 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 14084914

                                                         
Query: 327      tccttggccgcggcgatgccttggtccggagagagcagccc 367
                ||||| ||  ||||||| || || ||||| |||||||||||
Sbjct: 14084913 tccttcgcgccggcgatcccctgctccggcgagagcagccc 14084873



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                            
Query: 273      gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
                ||||||||||||||||||||||| || |||||||||||   ||||||| ||| |||||| 
Sbjct: 14097419 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 14097360

                                                   
Query: 333      gccgcggcgatgccttggtccggagagagcagccc 367
                ||  ||||||| || || |||||  ||||||||||
Sbjct: 14097359 gctccggcgatcccctgctccggccagagcagccc 14097325
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>ref|NM_196498.1| Oryza sativa (japonica cultivar-group) putative class III chitinase
           (OSJNBa0032I20.10), mRNA
          Length = 861

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 127/155 (81%)
 Strand = Plus / Minus

                                                                       
Query: 213 tggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctctgcttg 272
           |||||||||||||||||||| ||| ||||||| ||    |||||||||  |||   | ||
Sbjct: 857 tggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctgaccatg 798

                                                                       
Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
           ||||| ||||| ||||||||||| ||||||||||||||   ||||||| ||| |||||| 
Sbjct: 797 gagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaactccttc 738

                                              
Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367
           ||  ||||||| || || ||||| |||||||||||
Sbjct: 737 gcgccggcgatcccctgctccggcgagagcagccc 703
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>ref|NM_196501.1| Oryza sativa (japonica cultivar-group) putative class III chitinase
           (OSJNBa0032I20.12), mRNA
          Length = 867

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                       
Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
           ||||||||||||||||||||||| || |||||||||||   ||||||| ||| |||||| 
Sbjct: 803 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 744

                                              
Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367
           ||  ||||||| || || |||||  ||||||||||
Sbjct: 743 gctccggcgatcccctgctccggccagagcagccc 709
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>dbj|AK119555.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E12, full
           insert sequence
          Length = 1089

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                       
Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
           ||||||||||||||||||||||| || |||||||||||   ||||||| ||| |||||| 
Sbjct: 827 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 768

                                              
Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367
           ||  ||||||| || || |||||  ||||||||||
Sbjct: 767 gctccggcgatcccctgctccggccagagcagccc 733
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>dbj|AK104292.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F06, full
           insert sequence
          Length = 1108

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                       
Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
           ||||||||||||||||||||||| || |||||||||||   ||||||| ||| |||||| 
Sbjct: 822 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 763

                                              
Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367
           ||  ||||||| || || |||||  ||||||||||
Sbjct: 762 gctccggcgatcccctgctccggccagagcagccc 728
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>dbj|AK104222.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E05, full
           insert sequence
          Length = 1069

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                       
Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
           ||||||||||||||||||||||| || |||||||||||   ||||||| ||| |||||| 
Sbjct: 827 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 768

                                              
Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367
           ||  ||||||| || || |||||  ||||||||||
Sbjct: 767 gctccggcgatcccctgctccggccagagcagccc 733
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>dbj|AK099101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025I19, full
           insert sequence
          Length = 1068

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                       
Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
           ||||||||||||||||||||||| || |||||||||||   ||||||| ||| |||||| 
Sbjct: 826 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 767

                                              
Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367
           ||  ||||||| || || |||||  ||||||||||
Sbjct: 766 gctccggcgatcccctgctccggccagagcagccc 732
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>dbj|AK060033.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H08, full
           insert sequence
          Length = 1134

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                       
Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332
           ||||||||||||||||||||||| || |||||||||||   ||||||| ||| |||||| 
Sbjct: 827 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 768

                                              
Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367
           ||  ||||||| || || |||||  ||||||||||
Sbjct: 767 gctccggcgatcccctgctccggccagagcagccc 733
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 320    cagcagctccttggccgcggcgatg 344
              ||||||||||||||||||| |||||
Sbjct: 223939 cagcagctccttggccgcgccgatg 223963
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>gb|AE005788.1| Caulobacter crescentus CB15 section 114 of 359 of the complete genome
          Length = 13332

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 276  ctgtccgccgaccagatgaagaacc 300
            ||||||||||||||||| |||||||
Sbjct: 8705 ctgtccgccgaccagatcaagaacc 8729
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>ref|XM_480513.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2127

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 281 cgccgaccagatgaagaacc 300
           ||||||||||||||||||||
Sbjct: 156 cgccgaccagatgaagaacc 137
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>ref|XM_530166.1| PREDICTED: Pan troglodytes LOC457198 (LOC457198), mRNA
          Length = 970

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 cagcagctccttggccgcgg 339
           ||||||||||||||||||||
Sbjct: 665 cagcagctccttggccgcgg 646
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 292     tgaagaaccccggcagcttg 311
               ||||||||||||||||||||
Sbjct: 3442684 tgaagaaccccggcagcttg 3442665
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    gccgcagcagctccttggcc 335
              ||||||||||||||||||||
Sbjct: 808210 gccgcagcagctccttggcc 808229
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>emb|Z98747.1|HS37J18 Human DNA sequence from clone RP1-37J18 on chromosome 1p36.2-36.3
             Contains two novel genes, complete sequence
          Length = 131427

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   agagagcagccccagctcct 375
             ||||||||||||||||||||
Sbjct: 99605 agagagcagccccagctcct 99586
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>emb|AL391244.11| Human DNA sequence from clone RP4-758J18 on chromosome 1p36.31-36.33
             Contains the 5' end of a novel gene, the CCNL2 gene for
             cyclin L2, the MRPL20 gene for mitochondrial ribosomal
             protein L20, nine novel genes and three CpG islands,
             complete sequence
          Length = 67923

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   cagcagctccttggccgcgg 339
             ||||||||||||||||||||
Sbjct: 18129 cagcagctccttggccgcgg 18110
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>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     ttcatttcattcctgaacca 35
              ||||||||||||||||||||
Sbjct: 164970 ttcatttcattcctgaacca 164989
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>gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179613

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     ttcatttcattcctgaacca 35
              ||||||||||||||||||||
Sbjct: 118500 ttcatttcattcctgaacca 118519
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 320    cagcagctccttggccgcggcgat 343
              |||| |||||||||||||||||||
Sbjct: 539986 cagctgctccttggccgcggcgat 540009
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>gb|BC102258.1| Bos taurus similar to putative breast adenocarcinoma marker, mRNA
           (cDNA clone MGC:127087 IMAGE:7943199), complete cds
          Length = 935

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 gttctgccgcagcagctcct 330
           ||||||||||||||||||||
Sbjct: 225 gttctgccgcagcagctcct 206
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 281     cgccgaccagatgaagaacc 300
               ||||||||||||||||||||
Sbjct: 5537576 cgccgaccagatgaagaacc 5537557
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>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0035F08
          Length = 167446

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   cgccgaccagatgaagaacc 300
             ||||||||||||||||||||
Sbjct: 63804 cgccgaccagatgaagaacc 63785
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>dbj|AK110033.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-A12, full
            insert sequence
          Length = 3789

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 316  gccgcagcagctccttggcc 335
            ||||||||||||||||||||
Sbjct: 2492 gccgcagcagctccttggcc 2473
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>gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78 of 83 of the complete
              sequence
          Length = 365612

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     ttcatttcattcctgaacca 35
              ||||||||||||||||||||
Sbjct: 297862 ttcatttcattcctgaacca 297881
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>ref|NM_001034550.1| Bos taurus similar to putative breast adenocarcinoma marker
           (MGC127087), mRNA
          Length = 935

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 gttctgccgcagcagctcct 330
           ||||||||||||||||||||
Sbjct: 225 gttctgccgcagcagctcct 206


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,752,075
Number of Sequences: 3902068
Number of extensions: 2752075
Number of successful extensions: 63698
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63511
Number of HSP's gapped (non-prelim): 187
length of query: 385
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 363
effective length of database: 17,147,199,772
effective search space: 6224433517236
effective search space used: 6224433517236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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