>ZO1_HUMAN (Q07157) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
           (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1748

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 204 HRPVSIEESTFERNERLVSGIPNPKTRRPCYCEL 103
           H P ++EE T ERNE+    +P PK   P Y ++
Sbjct: 362 HTPKTVEEVTVERNEKQTPSLPEPK---PVYAQV 392

>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
           (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1745

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 204 HRPVSIEESTFERNERLVSGIPNPKTRRPCYCEL 103
           H P ++EE T E+NE+    +P PK   P Y ++
Sbjct: 362 HPPKAVEEVTVEKNEKQTPTLPEPK---PVYAQV 392

>UNG_PRVKA (P52507) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 316

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 317 QQGVPGLRRPAAWAPVAQDVEQQQQEMRP 231
           ++GVPG   P  WA + + V Q+  E RP
Sbjct: 224 RRGVPGSHAPLGWARLVRAVVQRLCETRP 252

>UNG_PRVIF (P52506) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 315

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 317 QQGVPGLRRPAAWAPVAQDVEQQQQEMRP 231
           ++GVPG   P  WA + + V Q+  E RP
Sbjct: 223 RRGVPGSHAPLGWARLVRAVVQRLCETRP 251

>PRIA_MYCLE (Q9CCQ3) Putative primosomal protein N' (EC 3.6.1.-) (ATP-dependent|
           helicase priA) (Replication factor Y)
          Length = 651

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 292 RLSPGTPCCWRLRWCGRSPWRLQSA 366
           R +PGT CC    WCGR+   L+ A
Sbjct: 392 RATPGTVCC----WCGRADLTLRCA 412

>LGRC_BREPA (Q70LM5) Linear gramicidin synthetase subunit C [Includes:|
            ATP-dependent valine adenylase (ValA) (Valine activase);
            ATP-dependent D-valine adenylase (D-ValA) (D-valine
            activase); Valine racemase [ATP-hydrolyzing] (EC
            5.1.1.-); ATP-dependent tr
          Length = 7756

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -2

Query: 323  LQQQGVPGLRRPAAWAPVAQDVEQQQQEMRPF 228
            L ++ +PG++R AA+  VA+D  +Q  ++R +
Sbjct: 7122 LAREDMPGVKRLAAYVVVAEDDAEQADDLRGY 7153

>K1043_MOUSE (Q80XJ3) TPR repeat-containing protein KIAA1043|
          Length = 1691

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 137  LGMPETKRSFLSKVLSSMETGRW*PQRA*QETVSFLVVVVQHLERLEPKQQVA 295
            LG+P      L K++++ ETG     RA +  V  L  V+  L+  E +Q  A
Sbjct: 1060 LGLPNPALQALCKLITASETGEQLISRAVKNMVGMLHQVLVQLQACEKEQDFA 1112

>ATS19_HUMAN (Q8TE59) ADAMTS-19 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 19)
           (ADAM-TS 19) (ADAM-TS19)
          Length = 1207

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 129 FSGWECQKLSVH-SSQKYFLQW 191
           F  W+CQ  SV  SS K+ LQW
Sbjct: 692 FRDWQCQAYSVRTSSPKHILQW 713

>K1043_HUMAN (Q96AY4) TPR repeat-containing protein KIAA1043|
          Length = 1716

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 137  LGMPETKRSFLSKVLSSMETGRW*PQRA*QETVSFLVVVVQHLERLEPKQQVA 295
            LG+P      L K++++ ETG     RA +  V  L  V+  L+  E +Q +A
Sbjct: 1060 LGLPNPALQALCKLITASETGEQLISRAVKNMVGMLHQVLVQLQAGEKEQDLA 1112

>YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5|
          Length = 780

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 335 HHRSLQQQGVPGLRRPAAWAPVAQDVEQQQQEMR 234
           HH    Q G PG R  AA    AQ  +QQQQ+ +
Sbjct: 320 HHN---QMGPPGDRNVAAQRAAAQQQQQQQQQQQ 350

>DLL_DROME (P20009) Homeotic protein distal-less (Protein brista)|
          Length = 327

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 354 PPGRSPTPSQSPTTRCS 304
           PPG SPTPS +P +  S
Sbjct: 232 PPGHSPTPSSTPVSELS 248


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,408,825
Number of Sequences: 219361
Number of extensions: 937772
Number of successful extensions: 2750
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2746
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)