ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart53e05 |
|---|---|
| Clone Library Name | barley_pub |
>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (LeOPR1) Length = 376 Score = 112 bits (279), Expect = 3e-25 Identities = 47/66 (71%), Positives = 60/66 (90%) Frame = -2 Query: 382 GGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYT 203 GGYDR++GN+ + + ADLVAYGR+F++NPDLPKRF L+APLNKY+R+TFYT DPI+GYT Sbjct: 308 GGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYT 367 Query: 202 DYPFLD 185 DYPFL+ Sbjct: 368 DYPFLE 373
>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (AtOPR1) (FS-AT-I) Length = 372 Score = 110 bits (276), Expect = 6e-25 Identities = 48/68 (70%), Positives = 58/68 (85%) Frame = -2 Query: 382 GGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYT 203 GG+ R++GN+ V+ G DLVAYGR FLANPDLPKRF +DAPLNKYDR TFYT DP++GYT Sbjct: 304 GGFTREDGNEAVSKGRTDLVAYGRWFLANPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYT 363 Query: 202 DYPFLDGS 179 DYPFL+ + Sbjct: 364 DYPFLEST 371
>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase 2) (AtOPR2) Length = 374 Score = 109 bits (272), Expect = 2e-24 Identities = 48/68 (70%), Positives = 58/68 (85%) Frame = -2 Query: 382 GGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYT 203 GG+ R++GN+ VA G DLVAYGR FLANPDLPKRF LDAPLNKY+R+TFYT DP++GYT Sbjct: 306 GGFTREDGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYT 365 Query: 202 DYPFLDGS 179 DYP L+ + Sbjct: 366 DYPSLEST 373
>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)| (LeOPR2) Length = 355 Score = 108 bits (270), Expect = 3e-24 Identities = 45/66 (68%), Positives = 58/66 (87%) Frame = -2 Query: 382 GGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYT 203 GGY + +G K + + YADL+++GR+FLANPDLPKRF ++APLNKY+R+TFYT DPIIGYT Sbjct: 287 GGYGKSDGEKAIDENYADLISFGRMFLANPDLPKRFEVNAPLNKYNRSTFYTNDPIIGYT 346 Query: 202 DYPFLD 185 DYPFL+ Sbjct: 347 DYPFLE 352
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 102 bits (254), Expect = 2e-22 Identities = 45/70 (64%), Positives = 57/70 (81%) Frame = -2 Query: 382 GGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYT 203 GGY R+ G + VA G ADLV+YGR+F++NPDL R L+APLNKY+R TFYTQDP++GYT Sbjct: 320 GGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDPVVGYT 379 Query: 202 DYPFLDGSNA 173 DYPFL G+ + Sbjct: 380 DYPFLQGNGS 389
>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (Delayed dehiscence 1) (AtOPR3) Length = 391 Score = 96.3 bits (238), Expect = 2e-20 Identities = 41/65 (63%), Positives = 53/65 (81%) Frame = -2 Query: 382 GGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYT 203 GG++++ G + V G ADLV+YGR+F+ANPDL RF +D LNKY+R TFYTQDP++GYT Sbjct: 321 GGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFYTQDPVVGYT 380 Query: 202 DYPFL 188 DYPFL Sbjct: 381 DYPFL 385
>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC| 1.3.1.-) Length = 324 Score = 75.5 bits (184), Expect = 3e-14 Identities = 34/44 (77%), Positives = 39/44 (88%) Frame = -2 Query: 382 GGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFGLDAPLNK 251 GGY R++GNK VA+G DLVAYGR+FLANPDLPKRF L+APLNK Sbjct: 281 GGYTREDGNKAVAEGRTDLVAYGRLFLANPDLPKRFELNAPLNK 324
>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 392 Score = 66.2 bits (160), Expect = 2e-11 Identities = 34/64 (53%), Positives = 43/64 (67%) Frame = -2 Query: 382 GGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYT 203 GG+DR ++ A+ LVA+GR FL+NPDLP R + PLNK+DR TFYT+ GY Sbjct: 319 GGHDRDSAIQM-AEQENTLVAFGRYFLSNPDLPFRLKYNLPLNKWDRATFYTKMSPKGYI 377 Query: 202 DYPF 191 DYPF Sbjct: 378 DYPF 381
>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 382 Score = 59.3 bits (142), Expect = 2e-09 Identities = 32/64 (50%), Positives = 40/64 (62%) Frame = -2 Query: 382 GGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYT 203 GGYD + + A+ LVA+GR F+ANPDL R PLNK+DR++FY GYT Sbjct: 312 GGYDPETAVQA-ANERGVLVAFGRNFIANPDLVFRIKHHIPLNKWDRSSFYLPKTEKGYT 370 Query: 202 DYPF 191 DYPF Sbjct: 371 DYPF 374
>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)| Length = 399 Score = 57.4 bits (137), Expect = 8e-09 Identities = 27/45 (60%), Positives = 31/45 (68%) Frame = -2 Query: 328 LVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYTDYP 194 L+ YGR F++NPDL R PLNKYDR+TFYT GYTDYP Sbjct: 343 LIGYGRFFISNPDLVYRLEEGLPLNKYDRSTFYTMS-AEGYTDYP 386
>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 399 Score = 54.3 bits (129), Expect = 7e-08 Identities = 26/45 (57%), Positives = 30/45 (66%) Frame = -2 Query: 328 LVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYTDYP 194 L+ YGR F++NPDL R PLNKYDR+TFY Q GY DYP Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFY-QMSAHGYIDYP 386
>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)| Length = 399 Score = 53.5 bits (127), Expect = 1e-07 Identities = 25/45 (55%), Positives = 29/45 (64%) Frame = -2 Query: 328 LVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYTDYP 194 L+ YGR F++NPDL R PLNKYDR+TFY GY DYP Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYKMS-AEGYIDYP 386
>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 398 Score = 50.8 bits (120), Expect = 8e-07 Identities = 24/45 (53%), Positives = 29/45 (64%) Frame = -2 Query: 328 LVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYTDYP 194 L+ YGR F+ANPDL +R PLN+YDR +FY GY DYP Sbjct: 343 LIGYGRAFIANPDLVERLEKGLPLNQYDRPSFYKMS-AEGYIDYP 386
>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide| reducing enzyme) Length = 365 Score = 46.6 bits (109), Expect = 1e-05 Identities = 26/65 (40%), Positives = 34/65 (52%) Frame = -2 Query: 382 GGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFYTQDPIIGYT 203 G Y ++ ++ G D VA+GR ++ANPDL R A LN +FY GYT Sbjct: 302 GAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAESFY-GGGAEGYT 360 Query: 202 DYPFL 188 DYP L Sbjct: 361 DYPTL 365
>EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1)| (Estrogen-binding protein) (EBP) Length = 406 Score = 38.5 bits (88), Expect = 0.004 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = -2 Query: 376 YDRKEGNKVVADGYAD--LVAYGRIFLANPDLPKRFGLDAPLNKYDRNTFY 230 YD E ++ D D ++ + R F +NPDL ++ L PLN Y+R FY Sbjct: 333 YDAPEFKTLINDLKNDRSIIGFSRFFTSNPDLVEKLKLGKPLNYYNREEFY 383
>NADO_THEBR (P32382) NADH oxidase (EC 1.-.-.-)| Length = 651 Score = 32.7 bits (73), Expect = 0.22 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = -2 Query: 355 KVVADGYADLVAYGRIFLANPDLPKR 278 K++A+G AD VA GR +A+P+ PK+ Sbjct: 307 KIIAEGRADFVAVGRGLIADPEWPKK 332
>Y435_BUCAI (P57510) Hypothetical protein BU435| Length = 319 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = +3 Query: 45 YISKLFVEMIHYTCPCIYIPEKKLLQLYKPSKSLTIV 155 ++S LFV++ + +CP I+ K +L KPS+ +V Sbjct: 128 FLSSLFVKIPNQSCPVIHEDNKTILWYEKPSERFLLV 164
>MAD1_YEAST (P40957) Spindle assembly checkpoint component MAD1 (Mitotic arrest| deficient protein 1) Length = 749 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +2 Query: 176 VRAIKERIVCVANDRILCVEGVAVVLVQRSVEPKSLRQIWISK 304 ++++KER ND+ C+E + L + +E ++LRQ + SK Sbjct: 124 LKSLKERSANSMNDKDKCIEELRTTLQNKDLEMETLRQQYDSK 166
>ISPH_CLOTE (Q895G2) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 635 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +3 Query: 30 GITWEYISKLF---VEMIHYTCPCIYIPEKKLLQLYKPSKSLTIVEQMNY 170 G+T E I KL + +I TCP + +KK + YK S+ IV N+ Sbjct: 78 GVTLETIQKLKEKKLNIIDATCPYVSNIQKKAQKYYKEGYSILIVGDKNH 127
>G3P_AERPE (Q9YFS9) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)| (GAPDH) (NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase) Length = 343 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = +2 Query: 194 RIVCVANDRILCVEGVAVVLVQRSVEPKSLRQIWISKKDPSVSNKISIAVGHHFVAFLSI 373 R++C N R VE V VLV+R +PK +++ D V N ++ HH V ++ Sbjct: 149 RLICTLN-REFGVESVRAVLVRRGADPKEVKK---GPIDSIVLNPPTLP-SHHAVDVRTV 203 Query: 374 IP 379 +P Sbjct: 204 LP 205
>DCNL2_MOUSE (Q8BZJ7) DCN1-like protein 2 (Defective in cullin neddylation| protein 2-like protein 2) (DCUN1 domain-containing protein 2) Length = 258 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 254 VQRSVEPKSLRQIWISKKDPSVSNKISIAVGHHFVAFLSIIPS 382 ++ SV+ K L Q++ KDP NKI I F LS+ P+ Sbjct: 56 MKSSVDQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPA 98
>DLTC_LACRH (P55153) D-alanine--poly(phosphoribitol) ligase subunit 2 (EC| 6.1.1.13) (D-alanyl carrier protein) (DCP) Length = 81 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/27 (40%), Positives = 20/27 (74%) Frame = -2 Query: 292 DLPKRFGLDAPLNKYDRNTFYTQDPII 212 +L +FG+DAP++++DR + T + II Sbjct: 48 ELQSQFGVDAPVSEFDRKEWDTPNKII 74
>Y31K_SSV1 (P20203) Hypothetical 31.5 kDa protein (ORF B-277)| Length = 277 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 10/60 (16%) Frame = +2 Query: 233 EGVAVVLVQRS----------VEPKSLRQIWISKKDPSVSNKISIAVGHHFVAFLSIIPS 382 +G++++ ++R+ +E K LR+ W+ +P + ++ G FVA ++P+ Sbjct: 108 DGLSILFLRRAKLIENQGYLMLEVKKLRKAWVLTAEPILLERLKFPFGKKFVAVHFVLPN 167
>XIST_MOUSE (P27571) X inactive-specific transcript protein (Fragment)| Length = 298 Score = 28.1 bits (61), Expect = 5.4 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 13/87 (14%) Frame = -3 Query: 222 ILSLATQTILSLMARTLNSSSAQL*LMICLVYIIVII----FSPV---------CICTGM 82 +LS + +SL + S+ + L + +C +Y++ I F+P C+ + Sbjct: 112 VLSCRALSFVSLSLVPVWSALSSLAMALCFIYLVAISLSFSFTPAFRDSLWVTCCMHPSL 171 Query: 81 CSVSFPQTIYLCTPM*CQYVKIFFKLI 1 V P + LC+ CQ + +FF L+ Sbjct: 172 FLVLTP--LVLCSSSLCQSISVFFLLL 196
>KCNA2_XENLA (P22739) Potassium voltage-gated channel subfamily A member 2| (Voltage-gated potassium channel subunit Kv1.2) (xSHA2) Length = 499 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/30 (43%), Positives = 22/30 (73%) Frame = -3 Query: 195 LSLMARTLNSSSAQL*LMICLVYIIVIIFS 106 L ++ +TLN+S +L L+I ++I VI+FS Sbjct: 314 LQILGQTLNASMRELGLLIFFLFIGVILFS 343
>DCNL1_MOUSE (Q9QZ73) DCN1-like protein 1 (Defective in cullin neddylation| protein 1-like protein 1) (DCUN1 domain-containing protein 1) (Testis-specific protein 3) Length = 259 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 254 VQRSVEPKSLRQIWISKKDPSVSNKISIAVGHHFVAFLSIIPS 382 V+ S++ K L Q++ KDP NKI I F L++ P+ Sbjct: 56 VKGSLDRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPA 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,518,621 Number of Sequences: 219361 Number of extensions: 1136410 Number of successful extensions: 2720 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2663 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2718 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
