>ICAM1_RAT (Q00238) Intercellular adhesion molecule 1 precursor (ICAM-1)|
          Length = 545

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +2

Query: 44  PPKCEPLSSTNHQDTSNKRVFLVAI---IPYKNLFSEEGVHSSLLWGKPHSPGSSCFGSF 214
           PP  +   + N     +KR F  +    +  K+LF  + +   +L+G PH     C G++
Sbjct: 360 PPTSQIQFTLNASPEDHKRRFFCSAALEVDGKSLFKNQTLELHVLYG-PHLDKKDCLGNW 418

Query: 215 TW 220
           TW
Sbjct: 419 TW 420

>CLFA_STAAR (Q6GIK4) Clumping factor A precursor (Fibrinogen-binding protein A)|
            (Fibrinogen receptor A)
          Length = 1029

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = +2

Query: 26   SSKYIIPPKCEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKPHSPGS 196
            S+  ++PP   P S TN    SNK     +  P  +  SE+  ++SL+WG   S GS
Sbjct: 963  SNNNVVPPN-SPKSGTN---ASNKNEAKESKEPLPDTGSEDEANTSLIWGLLASLGS 1015

>UNG_SCHPO (O74834) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 322

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +2

Query: 29  SKYIIPPKCEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKPHSP 190
           S+ + PPK +  S ++H      +V L+   PY N+    G+  S+  G P  P
Sbjct: 112 SQRVFPPKEDIYSWSHHTPLHKTKVILLGQDPYHNIGQAHGLCFSVRPGIPCPP 165

>PTPRJ_HUMAN (Q12913) Receptor-type tyrosine-protein phosphatase eta precursor|
           (EC 3.1.3.48) (Protein-tyrosine phosphatase eta)
           (R-PTP-eta) (HPTP eta) (Protein-tyrosine phosphatase
           receptor type J) (Density-enhanced phosphatase 1)
           (DEP-1) (CD148 antigen)
          Length = 1337

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +2

Query: 26  SSKYIIPPKCEPLSSTNHQDTSNKRVFLVAIIP---YKNLFSEEGVHSSLLWGKPHS 187
           +S+Y+     E    +NH  T +K + L  +IP   Y    S E  H   +WG P+S
Sbjct: 566 ASEYVYHLVIESKHGSNHTSTYDKAITLQGLIPGTLYNITISPEVDH---VWGDPNS 619

>CNTP1_MOUSE (O54991) Contactin-associated protein 1 precursor (Caspr) (Caspr1)|
            (Neurexin 4) (Neurexin IV) (Paranodin) (NCP1) (MHDNIV)
          Length = 1385

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
 Frame = -2

Query: 233  HMHSPK*MS----QSMKIQGSVVCPREEKSVHPLPR----INFCMELWQLKKPFYWMYPD 78
            H  +P+ M+    ++M++QG +     E +   +PR    +   ++ W L   F + + D
Sbjct: 1225 HFRTPRPMTAELAEAMRVQGEL----SESNCGAMPRLVSEVQPELDPWYLPPDFPYYHDD 1280

Query: 77   GWLSLAAHILV 45
            GW+++    LV
Sbjct: 1281 GWIAILLGFLV 1291

>SUV92_HUMAN (Q9H5I1) Histone-lysine N-methyltransferase, H3 lysine-9 specific 2|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 2)
           (H3-K9-HMTase 2) (Suppressor of variegation 3-9 homolog
           2) (Su(var)3-9 homolog 2)
          Length = 410

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +2

Query: 29  SKYIIPPKCEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKPH--SPGSSC 202
           ++YI+    + ++    QD  N+R     +I  +N    EG  S   +   +  +PG S 
Sbjct: 124 AEYIVKKAKQRIALQRWQDELNRRKNHKGMIFVENTVDLEGPPSDFYYINEYKPAPGISL 183

Query: 203 FGSFTWGCAC 232
               T+GC+C
Sbjct: 184 VNEATFGCSC 193

>NU4M_DINSE (O79555) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 445

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 154 TLFSSLGQTTLPWI-FMLWLIYLG 222
           TLF  + QTT PW   MLW+  LG
Sbjct: 169 TLFMQMMQTTSPWTELMLWIACLG 192

>NO12B_MEDSA (Q40339) Early nodulin 12B precursor (N-12B)|
          Length = 113

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 234 PHAQPQVNEPKHEDP 190
           PH +P VN+P+H++P
Sbjct: 55  PHKEPPVNKPRHKEP 69


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,919,004
Number of Sequences: 219361
Number of extensions: 686391
Number of successful extensions: 1999
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 80,573,946
effective HSP length: 53
effective length of database: 68,947,813
effective search space used: 1654747512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)