>gb|M36650.1|BLYGAPDH Barley glyceraldehyde-3-phosphate dehydrogenase mRNA, 3' end
          Length = 1141

 Score =  351 bits (177), Expect = 6e-94
 Identities = 217/230 (94%), Gaps = 2/230 (0%)
 Strand = Plus / Minus

                                                                        
Query: 5    gaaaataactcatgatttagttcaagcaagtacataataccaccaaaatgtgagccgcta 64
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 gaaaataactcatgatttagttcaagcaagtacataataccaccaaaatgtgagccgcta 1065

                                                                        
Query: 65   agctcaaccaaccatcaggatacatccaataaaagggnnnnnnnagttgccataattcca 124
            ||||||||||||||||||||| ||||||||||||||        ||||||||||||||||
Sbjct: 1064 agctcaaccaaccatcaggat-catccaataaaaggttttttttagttgccataattcca 1006

                                                                        
Query: 125  tacaaaaatttattctcggaagagggtgtacactcttctcttctctggggcaaaccacac 184
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1005 tacaaaaatttattctcggaagaggttgtacactcttctcttctctggggcaaaccacac 946

                                                              
Query: 185  tcccctggatcttcatgctttggctcatttacttggggctgtgcatgtgg 234
            | ||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 945  t-ccctgtatcttcatgctttggctcatttacttggtgctgtgcatgtgg 897

>ref|XM_506852.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1791_B03.34 mRNA
          Length = 1460

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 59/69 (85%), Gaps = 4/69 (5%)
 Strand = Plus / Minus

                                                                        
Query: 129  aaaatttattctcggaagagggtgtacactcttctcttctctggggcaaaccac-actcc 187
            ||||||||||||||||||||| |  |   ||| ||||||||||||||||| ||| |||||
Sbjct: 1323 aaaatttattctcggaagaggcttca---tctactcttctctggggcaaaacacaactcc 1267

                     
Query: 188  cctggatct 196
            |||| ||||
Sbjct: 1266 cctgtatct 1258

>ref|XM_466582.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1456

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 59/69 (85%), Gaps = 4/69 (5%)
 Strand = Plus / Minus

                                                                        
Query: 129  aaaatttattctcggaagagggtgtacactcttctcttctctggggcaaaccac-actcc 187
            ||||||||||||||||||||| |  |   ||| ||||||||||||||||| ||| |||||
Sbjct: 1339 aaaatttattctcggaagaggcttca---tctactcttctctggggcaaaacacaactcc 1283

                     
Query: 188  cctggatct 196
            |||| ||||
Sbjct: 1282 cctgtatct 1274

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 59/69 (85%), Gaps = 4/69 (5%)
 Strand = Plus / Minus

                                                                            
Query: 129      aaaatttattctcggaagagggtgtacactcttctcttctctggggcaaaccac-actcc 187
                ||||||||||||||||||||| |  |   ||| ||||||||||||||||| ||| |||||
Sbjct: 23549735 aaaatttattctcggaagaggcttca---tctactcttctctggggcaaaacacaactcc 23549679

                         
Query: 188      cctggatct 196
                |||| ||||
Sbjct: 23549678 cctgtatct 23549670

>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1791_B03
          Length = 166214

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 59/69 (85%), Gaps = 4/69 (5%)
 Strand = Plus / Minus

                                                                          
Query: 129    aaaatttattctcggaagagggtgtacactcttctcttctctggggcaaaccac-actcc 187
              ||||||||||||||||||||| |  |   ||| ||||||||||||||||| ||| |||||
Sbjct: 115418 aaaatttattctcggaagaggcttca---tctactcttctctggggcaaaacacaactcc 115362

                       
Query: 188    cctggatct 196
              |||| ||||
Sbjct: 115361 cctgtatct 115353

>dbj|AK099086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009G10, full
            insert sequence
          Length = 1460

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 59/69 (85%), Gaps = 4/69 (5%)
 Strand = Plus / Minus

                                                                        
Query: 129  aaaatttattctcggaagagggtgtacactcttctcttctctggggcaaaccac-actcc 187
            ||||||||||||||||||||| |  |   ||| ||||||||||||||||| ||| |||||
Sbjct: 1323 aaaatttattctcggaagaggcttca---tctactcttctctggggcaaaacacaactcc 1267

                     
Query: 188  cctggatct 196
            |||| ||||
Sbjct: 1266 cctgtatct 1258

>dbj|AK062215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A09, full
            insert sequence
          Length = 1455

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 59/69 (85%), Gaps = 4/69 (5%)
 Strand = Plus / Minus

                                                                        
Query: 129  aaaatttattctcggaagagggtgtacactcttctcttctctggggcaaaccac-actcc 187
            ||||||||||||||||||||| |  |   ||| ||||||||||||||||| ||| |||||
Sbjct: 1338 aaaatttattctcggaagaggcttca---tctactcttctctggggcaaaacacaactcc 1282

                     
Query: 188  cctggatct 196
            |||| ||||
Sbjct: 1281 cctgtatct 1273

>gb|AF251217.1|AF251217 Triticum aestivum cytosolic glyceraldehyde-3-phosphate
           dehydrogenase GAPDH mRNA, partial cds
          Length = 717

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 208 ctcatttacttggggctgtgcatgtg 233
           ||||||||||||| ||||||||||||
Sbjct: 714 ctcatttacttggtgctgtgcatgtg 689

>ref|XM_614616.2| PREDICTED: Bos taurus similar to solute carrier family 25 member 24
            isoform 2, transcript variant 2 (LOC534742), mRNA
          Length = 3261

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 19   atttagttcaagcaagtacat 39
            |||||||||||||||||||||
Sbjct: 1695 atttagttcaagcaagtacat 1675

>ref|XM_864288.1| PREDICTED: Bos taurus similar to solute carrier family 25 member 24
            isoform 2, transcript variant 3 (LOC534742), mRNA
          Length = 3324

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 19   atttagttcaagcaagtacat 39
            |||||||||||||||||||||
Sbjct: 1758 atttagttcaagcaagtacat 1738

>emb|CR450741.5| Zebrafish DNA sequence from clone CH211-269F16 in linkage group 24,
              complete sequence
          Length = 157603

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 202    ctttggctcatttacttgggg 222
              |||||||||||||||||||||
Sbjct: 134299 ctttggctcatttacttgggg 134279

>gb|DQ083193.1| Oryza sativa (indica cultivar-group) clone 8S4Eb01 mRNA sequence
          Length = 206

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 129 aaaatttattctcggaagagg 149
           |||||||||||||||||||||
Sbjct: 38  aaaatttattctcggaagagg 18

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 157      ctcttctcttctctggggcaa 177
                |||||||||||||||||||||
Sbjct: 28719022 ctcttctcttctctggggcaa 28719042

>emb|BX537129.6| Zebrafish DNA sequence from clone CH211-236I20 in linkage group 18,
             complete sequence
          Length = 166655

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   ctttggctcatttacttgggg 222
             |||||||||||||||||||||
Sbjct: 11155 ctttggctcatttacttgggg 11175

>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0431H09
          Length = 166886

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 157    ctcttctcttctctggggcaa 177
              |||||||||||||||||||||
Sbjct: 102096 ctcttctcttctctggggcaa 102116

>gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete sequence
          Length = 161996

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    ataattccatacaaaaattt 135
              ||||||||||||||||||||
Sbjct: 114326 ataattccatacaaaaattt 114307

>gb|AC124364.4| Mus musculus BAC clone RP24-538E16 from chromosome 12, complete sequence
          Length = 177697

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    acactcttctcttctctggg 173
              ||||||||||||||||||||
Sbjct: 111397 acactcttctcttctctggg 111378

>gb|AC122519.4| Mus musculus BAC clone RP24-462C10 from chromosome 6, complete sequence
          Length = 138242

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   gtgtacactcttctcttctc 169
             ||||||||||||||||||||
Sbjct: 25760 gtgtacactcttctcttctc 25741

>gb|AC110378.4| Mus musculus BAC clone RP24-193H8 from 6, complete sequence
          Length = 166527

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    gtgtacactcttctcttctc 169
              ||||||||||||||||||||
Sbjct: 164747 gtgtacactcttctcttctc 164766

>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
              complete sequence
          Length = 179798

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    cataattccatacaaaaatt 134
              ||||||||||||||||||||
Sbjct: 151831 cataattccatacaaaaatt 151850

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 115      cataattccatacaaaaatt 134
                ||||||||||||||||||||
Sbjct: 30884310 cataattccatacaaaaatt 30884329

>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 14      tcatgatttagttcaagcaagtac 37
               |||||||||||| |||||||||||
Sbjct: 2817665 tcatgatttagtacaagcaagtac 2817688

>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete
             sequence
          Length = 134586

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   cataattccatacaaaaatt 134
             ||||||||||||||||||||
Sbjct: 60884 cataattccatacaaaaatt 60903

>gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89 of 118 of the complete
              sequence
          Length = 307443

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    ataattccatacaaaaattt 135
              ||||||||||||||||||||
Sbjct: 248319 ataattccatacaaaaattt 248338

>emb|BX284664.8| Zebrafish DNA sequence from clone DKEY-7I23 in linkage group 8,
             complete sequence
          Length = 228202

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   aattccatacaaaaatttat 137
             ||||||||||||||||||||
Sbjct: 28677 aattccatacaaaaatttat 28658

>emb|AL591973.1| Listeria monocytogenes strain EGD, complete genome, segment 1/12
          Length = 200050

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    caagcaagtacataatacca 46
             ||||||||||||||||||||
Sbjct: 17524 caagcaagtacataatacca 17505

>gb|AC136008.5| Mus musculus BAC clone RP24-68J1 from 6, complete sequence
          Length = 181220

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    gtgtacactcttctcttctc 169
              ||||||||||||||||||||
Sbjct: 169604 gtgtacactcttctcttctc 169585

>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    caagcaagtacataatacca 46
             ||||||||||||||||||||
Sbjct: 19606 caagcaagtacataatacca 19587


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,914,673
Number of Sequences: 3902068
Number of extensions: 2914673
Number of successful extensions: 134618
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134485
Number of HSP's gapped (non-prelim): 131
length of query: 234
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 212
effective length of database: 17,147,199,772
effective search space: 3635206351664
effective search space used: 3635206351664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)