ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart53e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DHB8_HUMAN (Q92506) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.... 30 1.9
2DHB8_CANFA (Q5TJF5) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.... 30 1.9
3DHB8_PIG (Q9XT00) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62... 28 5.6
4GCSP_YEAST (P49095) Glycine dehydrogenase [decarboxylating], mit... 28 7.4
5CREL1_BOVIN (Q5EA46) Cysteine-rich with EGF-like domain protein ... 28 7.4
6CATV_NPVAH (Q80LP4) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cys... 28 7.4
7YIW0_YEAST (P40584) Hypothetical 13.0 kDa protein in HYR1 3'region 27 9.6
8CREL1_RAT (Q4V7F2) Cysteine-rich with EGF-like domain protein 1 ... 27 9.6
9CREL1_MOUSE (Q91XD7) Cysteine-rich with EGF-like domain protein ... 27 9.6
10ACCA_CYACA (O19903) Acetyl-coenzyme A carboxylase carboxyl trans... 27 9.6

>DHB8_HUMAN (Q92506) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62)|
           (17-beta-HSD 8) (17-beta-hydroxysteroid dehydrogenase 8)
           (Protein Ke6) (Ke-6)
          Length = 261

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 34  CAIYVQRLLGYRINEDEQWSKIVSSNLKGLPT*LTHAVLCAPTHGCRGCAENMIS 198
           CA   Q      ++ED+ W K+++ NLKG       A     ++GCRG   N+ S
Sbjct: 103 CAGITQDEFLLHMSEDD-WDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISS 156



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>DHB8_CANFA (Q5TJF5) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62)|
           (17-beta-HSD 8) (17-beta-hydroxysteroid dehydrogenase 8)
          Length = 259

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 67  RINEDEQWSKIVSSNLKGLPT*LTHAVLCAPTHGCRGCAENMIS 198
           R++ED+ W ++++ NLKG+      A     + GCRG   N+ S
Sbjct: 112 RMSEDD-WDRVIAVNLKGIFLVTQAAAQALVSSGCRGSIINISS 154



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>DHB8_PIG (Q9XT00) Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62)|
           (17-beta-HSD 8) (17-beta-hydroxysteroid dehydrogenase 8)
           (Ke6 protein) (Ke-6)
          Length = 259

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 67  RINEDEQWSKIVSSNLKGLPT*LTHAVLCAPTHGCRGCAENMIS 198
           R++ED+ W K+++ NLKG+      A     + GC G   N+ S
Sbjct: 112 RMSEDD-WDKVIAVNLKGIFLVTQAAAQALVSSGCPGSIINISS 154



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>GCSP_YEAST (P49095) Glycine dehydrogenase [decarboxylating], mitochondrial|
           precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine
           cleavage system P-protein)
          Length = 1034

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 261 CSRLVRCSSGFLTLAKETSLE*NHVFSATAATVGWSTQHS 142
           C   VR S+ +++LA+  S     +   TAAT   STQ+S
Sbjct: 11  CRATVRSSTNYVSLARTRSFHSQSILLKTAATDITSTQYS 50



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>CREL1_BOVIN (Q5EA46) Cysteine-rich with EGF-like domain protein 1 precursor|
          Length = 420

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +3

Query: 186 KHDFIPDLFPWLRSKNLSCSARDESSGYSCLHPPIG 293
           K    PDLF WL S +L       + G SCL  P G
Sbjct: 123 KQQEAPDLFQWLCSDSLKLCCPSGTFGPSCLPCPGG 158



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>CATV_NPVAH (Q80LP4) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine|
           proteinase) (CP)
          Length = 337

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +3

Query: 105 LESKGAPYMINTCCAVCSNPRLPRLR*KHDFIPDLFPWLRSKNLSCSARDESSGYSC-LH 281
           L SK    M+ +    C+   L      HD +P  F W R  N   S +D+ +  SC  H
Sbjct: 95  LTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDW-RVNNKMTSVKDQGACGSCWAH 153

Query: 282 PPIGNTSSKY 311
             +G   + Y
Sbjct: 154 AAVGTLETLY 163



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>YIW0_YEAST (P40584) Hypothetical 13.0 kDa protein in HYR1 3'region|
          Length = 110

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +3

Query: 144 CAVCSNP--RLPRLR*KHDFIPDLFPWLRSKNLSCSARDESSGYSCLHP 284
           CA C N   R+PR   K   +P  FP+   KN+     D  +   CL P
Sbjct: 31  CAECGNANYRVPRCLIKPFSVPVTFPFSVKKNIRILDLDPRTEAYCLSP 79



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>CREL1_RAT (Q4V7F2) Cysteine-rich with EGF-like domain protein 1 precursor|
          Length = 420

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 201 PDLFPWLRSKNLSCSARDESSGYSCLHPPIG 293
           PDLF WL S +L       + G SCL  P G
Sbjct: 128 PDLFQWLCSDSLKLCCPSGTFGPSCLPCPGG 158



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>CREL1_MOUSE (Q91XD7) Cysteine-rich with EGF-like domain protein 1 precursor|
          Length = 420

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 201 PDLFPWLRSKNLSCSARDESSGYSCLHPPIG 293
           PDLF WL S +L       + G SCL  P G
Sbjct: 128 PDLFQWLCSDSLKLCCPSGTFGPSCLPCPGG 158



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>ACCA_CYACA (O19903) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 324

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 7/38 (18%)
 Frame = -2

Query: 316 LRYLDEVLPIG-G*RHEYPLLSSRAL------QLRFFD 224
           L+ +DE++P   G  H+YPLL  R L      QL FFD
Sbjct: 263 LKIIDEIIPEPFGVAHDYPLLMVRILKNKIRDQLDFFD 300


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,502,675
Number of Sequences: 219361
Number of extensions: 858288
Number of successful extensions: 1894
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1894
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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