ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart53e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476744.1| Oryza sativa (japonica cultivar-group), mRNA 98 2e-17
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 98 2e-17
3dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic D... 98 2e-17
4dbj|AK121818.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 2e-17
5dbj|AK060318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 2e-17
6gb|AY104706.1| Zea mays PCO076122 mRNA sequence 74 4e-10
7dbj|D10057.1|BLYIDS2 Hordeum vulgare ids-2 mRNA, complete cds 64 3e-07
8dbj|D15051.1|BLYIDS2NK Hordeum vulgare gene for ids2, complete cds 64 3e-07
9gb|AE014075.1| Escherichia coli CFT073, complete genome 46 0.080
10gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 44 0.32
11gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 44 0.32
12dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 44 0.32
13emb|BX323587.5| Zebrafish DNA sequence from clone CH211-100L3, c... 44 0.32
14gb|AC012101.7| Homo sapiens chromosome 18, clone RP11-396D4, com... 44 0.32
15gb|AF455359.1| Spiroplasma citri GII3 cell shape-determining gen... 44 0.32
16gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, comp... 44 0.32
17gb|AC022723.9| Homo sapiens chromosome 18, clone RP11-237L16, co... 44 0.32
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
19gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 44 0.32
20dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 44 0.32
21emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in... 44 0.32
22gb|AF069757.1|AF069757 Dictyostelium discoideum spermidine synth... 44 0.32
23gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 44 0.32
24gb|U36841.1|ECU36841 Escherichia coli K-12 genome, approximately... 44 0.32
25gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome... 44 0.32
26gb|CP000036.1| Shigella boydii Sb227, complete genome 44 0.32
27gb|CP000038.1| Shigella sonnei Ss046, complete genome 44 0.32
28gb|BT016779.1| Zea mays clone Contig612 mRNA sequence 42 1.3
29gb|AC148408.2| X. tropicalis BAC clone ISB1-15D4 containing sox1... 42 1.3
30gb|AC185247.2| Pan troglodytes BAC clone CH251-7D5 from chromoso... 42 1.3
31emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in ... 42 1.3
32gb|AY437837.1| Helicoverpa armigera large subunit ribosomal RNA ... 42 1.3
33gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, comp... 42 1.3
34gb|AC183286.3| Pan troglodytes BAC clone CH251-56I13 from chromo... 42 1.3
35emb|BX908384.15| Zebrafish DNA sequence from clone DKEY-38K3 in ... 42 1.3
36emb|BX649403.4| Zebrafish DNA sequence from clone CH211-153M11 i... 42 1.3
37gb|AC182642.2| Pan troglodytes BAC clone CH251-216C21 from chrom... 42 1.3
38gb|AC125393.6| Pan troglodytes clone rp43-22m15, complete sequence 42 1.3
39gb|AC182470.3| Pan troglodytes BAC clone CH251-440F19 from chrom... 42 1.3
40gb|AC145543.3| Homo sapiens chromosome UNKNOWN clone RP11-1278L2... 42 1.3
41gb|AC138701.3| Homo sapiens chromosome 15, clone RP11-79C23, com... 42 1.3
42gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome ... 42 1.3
43emb|BX546504.9| Mouse DNA sequence from clone RP23-78N22 on chro... 42 1.3
44dbj|AP006217.1| Homo sapiens genomic DNA, chromosome 18, clone:C... 42 1.3
45gb|AC140407.5| Mus musculus BAC clone RP23-142K9 from chromosome... 42 1.3
46gb|U63834.1|HSU63834 Human KIT protein and alternatively spliced... 40 5.0
47gb|AE017263.1| Mesoplasma florum L1 complete genome 40 5.0
48gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, comp... 40 5.0
49gb|AC145787.2| Xenopus tropicalis clone CH216-117C14, complete s... 40 5.0
50gb|AC149517.2| Xenopus tropicalis clone CH216-47I1, complete seq... 40 5.0
51gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, comp... 40 5.0
52gb|AF254983.3| Homo sapiens chromosome 21 clone RP11-589M2 map p... 40 5.0
53gb|AC134251.3| Mus musculus BAC clone RP23-430D14 from chromosom... 40 5.0
54gb|AC127277.2| Mus musculus BAC clone RP24-221P14 from chromosom... 40 5.0
55gb|AC104692.1| Homo sapiens BAC clone RP11-208G20 from 7, comple... 40 5.0
56gb|AC117600.9| Mus musculus chromosome 1, clone RP23-449C20, com... 40 5.0
57ref|XM_670297.1| Plasmodium berghei strain ANKA hypothetical pro... 40 5.0
58emb|AL121823.12|HSBB212L9 Human DNA sequence from clone RP13-212... 40 5.0
59emb|AL589701.9| Mouse DNA sequence from clone RP23-202F3 on chro... 40 5.0
60emb|AL163201.2|HS21C001 Homo sapiens chromosome 21 segment HS21C001 40 5.0
61gb|AC147836.2| Xenopus tropicalis clone CH216-26D18, complete se... 40 5.0
62gb|AC147740.3| Xenopus tropicalis BAc clone ISB1-90K22 containin... 40 5.0
63gb|AC006206.3| Homo sapiens 12 BAC RPCI11-319E16 (Roswell Park C... 40 5.0
64gb|AC120338.4| Homo sapiens X BAC RP11-791N19 (Roswell Park Canc... 40 5.0
65gb|AC024568.6| Homo sapiens chromosome 5 clone CTD-2179L22, comp... 40 5.0
66gb|AC093917.3| Homo sapiens BAC clone RP11-800K23 from 4, comple... 40 5.0
67gb|AC093303.2| Homo sapiens chromosome 5 clone RP11-61K20, compl... 40 5.0
68gb|AC008493.5| Homo sapiens chromosome 5 clone CTC-427G18, compl... 40 5.0
69emb|BX470242.10| Zebrafish DNA sequence from clone CH211-195I24 ... 40 5.0
70gb|AC013480.12| Homo sapiens BAC clone RP11-564O16 from 2, compl... 40 5.0
71gb|AC124243.3| Homo sapiens chromosome 8, clone CTD-3077F2, comp... 40 5.0
72gb|AC112197.3| Homo sapiens chromosome 5 clone RP11-442I12, comp... 40 5.0
73emb|BX088594.5| Zebrafish DNA sequence from clone RP71-1G17 in l... 40 5.0
74gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 ... 40 5.0
75gb|AC006226.4|AC006226 Homo sapiens chromosome 4 clone C0011C13 ... 40 5.0
76dbj|AP006246.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 5.0
77emb|BX537681.1|HSM806610 Homo sapiens mRNA; cDNA DKFZp686I21208 ... 40 5.0
78gb|AC133180.3| Mus musculus BAC clone RP24-137D2 from chromosome... 40 5.0
79emb|BX005022.7| Zebrafish DNA sequence from clone DKEY-6N21 in l... 40 5.0
80gb|AC163040.5| Mus musculus BAC clone RP23-71C23 from chromosome... 40 5.0
81gb|AC147899.2| Xenopus tropicalis clone CH216-53A2, complete seq... 40 5.0
82emb|AL591582.32| Mouse DNA sequence from clone RP23-403P3 on chr... 40 5.0
83gb|AC124074.2| Homo sapiens chromosome 8, clone RP11-781O9, comp... 40 5.0
84dbj|AB020862.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 5.0 
>ref|XM_476744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1298

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 175/217 (80%)
 Strand = Plus / Minus

                                                                        
Query: 145  ttgaacgccttctccacgctctccctccgcgcgccgacggtcttgtacacgcgcatgaac 204
            ||||| |||||||| ||||| || |  |||||||||||||||||||| | ||||||||||
Sbjct: 1076 ttgaaggccttctcgacgctgtcgcggcgcgcgccgacggtcttgtagatgcgcatgaac 1017

                                                                        
Query: 205  tcgtcgaaagtgacagtgcggtagcgcggcgggttgccctcgcagacgagctcctccgcg 264
            |||  ||| ||||| ||||| ||  ||||| ||  ||| || | ||||||||||| ||| 
Sbjct: 1016 tcgcggaacgtgacggtgcgatactgcggctggccgccgtctccgacgagctccttcgcc 957

                                                                        
Query: 265  gggccgatggggatgtccgcggccggcatgatgaaggtcgccaccgaggttcgtgccagc 324
            || |||| | ||  ||||   | |||||| ||||| ||||||||||| || |  |||| |
Sbjct: 956  ggtccgacgaggcagtccatcggcggcatcatgaacgtcgccaccgacgtcctcgccacc 897

                                                 
Query: 325  gccgcgttggtcatcgcccggtgctcgatgctcttca 361
            |||| ||| |||||||||| |||||||||||||||||
Sbjct: 896  gccgagttcgtcatcgccctgtgctcgatgctcttca 860
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 175/217 (80%)
 Strand = Plus / Minus

                                                                           
Query: 145     ttgaacgccttctccacgctctccctccgcgcgccgacggtcttgtacacgcgcatgaac 204
               ||||| |||||||| ||||| || |  |||||||||||||||||||| | ||||||||||
Sbjct: 3733467 ttgaaggccttctcgacgctgtcgcggcgcgcgccgacggtcttgtagatgcgcatgaac 3733408

                                                                           
Query: 205     tcgtcgaaagtgacagtgcggtagcgcggcgggttgccctcgcagacgagctcctccgcg 264
               |||  ||| ||||| ||||| ||  ||||| ||  ||| || | ||||||||||| ||| 
Sbjct: 3733407 tcgcggaacgtgacggtgcgatactgcggctggccgccgtctccgacgagctccttcgcc 3733348

                                                                           
Query: 265     gggccgatggggatgtccgcggccggcatgatgaaggtcgccaccgaggttcgtgccagc 324
               || |||| | ||  ||||   | |||||| ||||| ||||||||||| || |  |||| |
Sbjct: 3733347 ggtccgacgaggcagtccatcggcggcatcatgaacgtcgccaccgacgtcctcgccacc 3733288

                                                    
Query: 325     gccgcgttggtcatcgcccggtgctcgatgctcttca 361
               |||| ||| |||||||||| |||||||||||||||||
Sbjct: 3733287 gccgagttcgtcatcgccctgtgctcgatgctcttca 3733251
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>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0050F10
          Length = 151986

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 175/217 (80%)
 Strand = Plus / Minus

                                                                         
Query: 145   ttgaacgccttctccacgctctccctccgcgcgccgacggtcttgtacacgcgcatgaac 204
             ||||| |||||||| ||||| || |  |||||||||||||||||||| | ||||||||||
Sbjct: 77818 ttgaaggccttctcgacgctgtcgcggcgcgcgccgacggtcttgtagatgcgcatgaac 77759

                                                                         
Query: 205   tcgtcgaaagtgacagtgcggtagcgcggcgggttgccctcgcagacgagctcctccgcg 264
             |||  ||| ||||| ||||| ||  ||||| ||  ||| || | ||||||||||| ||| 
Sbjct: 77758 tcgcggaacgtgacggtgcgatactgcggctggccgccgtctccgacgagctccttcgcc 77699

                                                                         
Query: 265   gggccgatggggatgtccgcggccggcatgatgaaggtcgccaccgaggttcgtgccagc 324
             || |||| | ||  ||||   | |||||| ||||| ||||||||||| || |  |||| |
Sbjct: 77698 ggtccgacgaggcagtccatcggcggcatcatgaacgtcgccaccgacgtcctcgccacc 77639

                                                  
Query: 325   gccgcgttggtcatcgcccggtgctcgatgctcttca 361
             |||| ||| |||||||||| |||||||||||||||||
Sbjct: 77638 gccgagttcgtcatcgccctgtgctcgatgctcttca 77602
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>dbj|AK121818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099A15, full
            insert sequence
          Length = 1301

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 175/217 (80%)
 Strand = Plus / Minus

                                                                        
Query: 145  ttgaacgccttctccacgctctccctccgcgcgccgacggtcttgtacacgcgcatgaac 204
            ||||| |||||||| ||||| || |  |||||||||||||||||||| | ||||||||||
Sbjct: 1079 ttgaaggccttctcgacgctgtcgcggcgcgcgccgacggtcttgtagatgcgcatgaac 1020

                                                                        
Query: 205  tcgtcgaaagtgacagtgcggtagcgcggcgggttgccctcgcagacgagctcctccgcg 264
            |||  ||| ||||| ||||| ||  ||||| ||  ||| || | ||||||||||| ||| 
Sbjct: 1019 tcgcggaacgtgacggtgcgatactgcggctggccgccgtctccgacgagctccttcgcc 960

                                                                        
Query: 265  gggccgatggggatgtccgcggccggcatgatgaaggtcgccaccgaggttcgtgccagc 324
            || |||| | ||  ||||   | |||||| ||||| ||||||||||| || |  |||| |
Sbjct: 959  ggtccgacgaggcagtccatcggcggcatcatgaacgtcgccaccgacgtcctcgccacc 900

                                                 
Query: 325  gccgcgttggtcatcgcccggtgctcgatgctcttca 361
            |||| ||| |||||||||| |||||||||||||||||
Sbjct: 899  gccgagttcgtcatcgccctgtgctcgatgctcttca 863
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>dbj|AK060318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F03, full
            insert sequence
          Length = 1298

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 175/217 (80%)
 Strand = Plus / Minus

                                                                        
Query: 145  ttgaacgccttctccacgctctccctccgcgcgccgacggtcttgtacacgcgcatgaac 204
            ||||| |||||||| ||||| || |  |||||||||||||||||||| | ||||||||||
Sbjct: 1076 ttgaaggccttctcgacgctgtcgcggcgcgcgccgacggtcttgtagatgcgcatgaac 1017

                                                                        
Query: 205  tcgtcgaaagtgacagtgcggtagcgcggcgggttgccctcgcagacgagctcctccgcg 264
            |||  ||| ||||| ||||| ||  ||||| ||  ||| || | ||||||||||| ||| 
Sbjct: 1016 tcgcggaacgtgacggtgcgatactgcggctggccgccgtctccgacgagctccttcgcc 957

                                                                        
Query: 265  gggccgatggggatgtccgcggccggcatgatgaaggtcgccaccgaggttcgtgccagc 324
            || |||| | ||  ||||   | |||||| ||||| ||||||||||| || |  |||| |
Sbjct: 956  ggtccgacgaggcagtccatcggcggcatcatgaacgtcgccaccgacgtcctcgccacc 897

                                                 
Query: 325  gccgcgttggtcatcgcccggtgctcgatgctcttca 361
            |||| ||| |||||||||| |||||||||||||||||
Sbjct: 896  gccgagttcgtcatcgccctgtgctcgatgctcttca 860
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>gb|AY104706.1| Zea mays PCO076122 mRNA sequence
          Length = 1382

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 142/177 (80%)
 Strand = Plus / Minus

                                                                        
Query: 195  gcgcatgaactcgtcgaaagtgacagtgcggtagcgcggcgggttgccctcgcagacgag 254
            |||| |||| ||| |||| ||||  |||||||||| |||||||||| | |||| || || 
Sbjct: 1064 gcgcttgaagtcggcgaaggtgagggtgcggtagcacggcgggttgtcgtcgctgaggaa 1005

                                                                        
Query: 255  ctcctccgcggggccgatggggatgtccgcggccggcatgatgaaggtcgccaccgaggt 314
            |||  | |||||||||||| ||  ||||| ||  ||||||||||| || |||||||  ||
Sbjct: 1004 ctcggcggcggggccgatgaggcagtccgtggtgggcatgatgaacgtggccaccgttgt 945

                                                                     
Query: 315  tcgtgccagcgccgcgttggtcatcgcccggtgctcgatgctcttcaaaaacccgtt 371
             || ||||   ||  |||||||||| |||||||||||||||||||||| | ||||||
Sbjct: 944  ccgcgccactcccaggttggtcatcacccggtgctcgatgctcttcaagatcccgtt 888
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>dbj|D10057.1|BLYIDS2 Hordeum vulgare ids-2 mRNA, complete cds
          Length = 1235

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 220 gtgcggtagcgcggcgggttgccctcgcagacgagctcctccgcggggccga 271
           ||||||||||| ||||||||| |||||| ||||| ||||||||| |||||||
Sbjct: 927 gtgcggtagcgtggcgggttgtcctcgctgacgaactcctccgcagggccga 876
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>dbj|D15051.1|BLYIDS2NK Hordeum vulgare gene for ids2, complete cds
          Length = 3411

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 220  gtgcggtagcgcggcgggttgccctcgcagacgagctcctccgcggggccga 271
            ||||||||||| ||||||||| |||||| ||||| ||||||||| |||||||
Sbjct: 2976 gtgcggtagcgtggcgggttgtcctcgctgacgaactcctccgcagggccga 2925
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 3       aaaataaaaatatacttttttat 25
               |||||||||||||||||||||||
Sbjct: 3523522 aaaataaaaatatacttttttat 3523500
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 320     ccagcgccgcgttggtcatcgc 341
               ||||||||||||||||||||||
Sbjct: 2675771 ccagcgccgcgttggtcatcgc 2675792
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 320     ccagcgccgcgttggtcatcgc 341
               ||||||||||||||||||||||
Sbjct: 2688922 ccagcgccgcgttggtcatcgc 2688943
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 320     ccagcgccgcgttggtcatcgc 341
               ||||||||||||||||||||||
Sbjct: 2689556 ccagcgccgcgttggtcatcgc 2689577
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>emb|BX323587.5| Zebrafish DNA sequence from clone CH211-100L3, complete sequence
          Length = 90800

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2     gaaaataaaaatatactttttt 23
             ||||||||||||||||||||||
Sbjct: 70779 gaaaataaaaatatactttttt 70800
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>gb|AC012101.7| Homo sapiens chromosome 18, clone RP11-396D4, complete sequence
          Length = 168965

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 3      aaaataaaaatatactttttta 24
              ||||||||||||||||||||||
Sbjct: 168002 aaaataaaaatatactttttta 167981
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>gb|AF455359.1| Spiroplasma citri GII3 cell shape-determining gene cluster, complete
            sequence
          Length = 6942

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 7    taaaaatatacttttttatgaa 28
            ||||||||||||||||||||||
Sbjct: 2140 taaaaatatacttttttatgaa 2119
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>gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, complete sequence
          Length = 176873

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 3      aaaataaaaatatactttttta 24
              ||||||||||||||||||||||
Sbjct: 126792 aaaataaaaatatactttttta 126813
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>gb|AC022723.9| Homo sapiens chromosome 18, clone RP11-237L16, complete sequence
          Length = 121014

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 3     aaaataaaaatatactttttta 24
             ||||||||||||||||||||||
Sbjct: 61070 aaaataaaaatatactttttta 61049
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 1        agaaaataaaaatatacttttttatg 26
                |||||||||||||| |||||||||||
Sbjct: 29514108 agaaaataaaaatacacttttttatg 29514133
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 320     ccagcgccgcgttggtcatcgc 341
               ||||||||||||||||||||||
Sbjct: 2669358 ccagcgccgcgttggtcatcgc 2669379
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 7       taaaaatatacttttttatgaa 28
               ||||||||||||||||||||||
Sbjct: 1658876 taaaaatatacttttttatgaa 1658897
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>emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in linkage group 25,
              complete sequence
          Length = 236784

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 2      gaaaataaaaatatactttttt 23
              ||||||||||||||||||||||
Sbjct: 226219 gaaaataaaaatatactttttt 226198
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>gb|AF069757.1|AF069757 Dictyostelium discoideum spermidine synthase gene, complete cds
          Length = 3280

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 3   aaaataaaaatatactttttta 24
           ||||||||||||||||||||||
Sbjct: 755 aaaataaaaatatactttttta 776
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 320     ccagcgccgcgttggtcatcgc 341
               ||||||||||||||||||||||
Sbjct: 2544771 ccagcgccgcgttggtcatcgc 2544792
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>gb|U36841.1|ECU36841 Escherichia coli K-12 genome, approximately 55 minutes
          Length = 15706

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 320  ccagcgccgcgttggtcatcgc 341
            ||||||||||||||||||||||
Sbjct: 2144 ccagcgccgcgttggtcatcgc 2165
to top
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0086G17, complete sequence
          Length = 134631

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1     agaaaataaaaatatacttttttatg 26
             |||||||||||||| |||||||||||
Sbjct: 98378 agaaaataaaaatacacttttttatg 98403
to top
>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 320     ccagcgccgcgttggtcatcgc 341
               ||||||||||||||||||||||
Sbjct: 2587977 ccagcgccgcgttggtcatcgc 2587998
to top
>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 320     ccagcgccgcgttggtcatcgc 341
               ||||||||||||||||||||||
Sbjct: 2794874 ccagcgccgcgttggtcatcgc 2794895
to top
>gb|BT016779.1| Zea mays clone Contig612 mRNA sequence
          Length = 1486

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                        
Query: 289  ggcatgatgaaggtcgccaccgaggttcgtgccagcgccgcgttggtcatcgcccggtgc 348
            ||||||||||| || |||||||  || || ||||||| || | |||||| | | ||||||
Sbjct: 1048 ggcatgatgaatgtggccaccgccgtccgcgccagcgtcgagctggtcaccacgcggtgc 989

                         
Query: 349  tcgatgctcttca 361
            || ||||||||||
Sbjct: 988  tcaatgctcttca 976
to top
>gb|AC148408.2| X. tropicalis BAC clone ISB1-15D4 containing sox17 alpha and beta
             genes, complete sequence
          Length = 97631

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     aaataaaaatatactttttta 24
             |||||||||||||||||||||
Sbjct: 11368 aaataaaaatatactttttta 11348
to top
>gb|AC185247.2| Pan troglodytes BAC clone CH251-7D5 from chromosome 15, complete sequence
          Length = 175295

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      aaataaaaatatactttttta 24
              |||||||||||||||||||||
Sbjct: 167863 aaataaaaatatactttttta 167843
to top
>emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in linkage group 7, complete
              sequence
          Length = 196531

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 7      taaaaatatacttttttatga 27
              |||||||||||||||||||||
Sbjct: 103830 taaaaatatacttttttatga 103810
to top
>gb|AY437837.1| Helicoverpa armigera large subunit ribosomal RNA gene, partial
          sequence; mitochondrial
          Length = 398

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  aaaataaaaatatactttttt 23
          |||||||||||||||||||||
Sbjct: 74 aaaataaaaatatactttttt 54
to top
>gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, complete sequence
          Length = 241627

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      aaataaaaatatactttttta 24
              |||||||||||||||||||||
Sbjct: 216127 aaataaaaatatactttttta 216107
to top
>gb|AC183286.3| Pan troglodytes BAC clone CH251-56I13 from chromosome 15, complete
             sequence
          Length = 164317

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     aaataaaaatatactttttta 24
             |||||||||||||||||||||
Sbjct: 90487 aaataaaaatatactttttta 90467
to top
>emb|BX908384.15| Zebrafish DNA sequence from clone DKEY-38K3 in linkage group 13,
             complete sequence
          Length = 213699

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     aaaataaaaatatactttttt 23
             |||||||||||||||||||||
Sbjct: 48122 aaaataaaaatatactttttt 48102
to top
>emb|BX649403.4| Zebrafish DNA sequence from clone CH211-153M11 in linkage group 13,
             complete sequence
          Length = 170097

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     aaaataaaaatatactttttt 23
             |||||||||||||||||||||
Sbjct: 74409 aaaataaaaatatactttttt 74429
to top
>gb|AC182642.2| Pan troglodytes BAC clone CH251-216C21 from chromosome 21, complete
             sequence
          Length = 187371

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     aaataaaaatatactttttta 24
             |||||||||||||||||||||
Sbjct: 40342 aaataaaaatatactttttta 40362
to top
>gb|AC125393.6| Pan troglodytes clone rp43-22m15, complete sequence
          Length = 187256

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      aaataaaaatatactttttta 24
              |||||||||||||||||||||
Sbjct: 125517 aaataaaaatatactttttta 125497
to top
>gb|AC182470.3| Pan troglodytes BAC clone CH251-440F19 from chromosome 2, complete
             sequence
          Length = 163061

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     aaataaaaatatactttttta 24
             |||||||||||||||||||||
Sbjct: 52460 aaataaaaatatactttttta 52480
to top
>gb|AC145543.3| Homo sapiens chromosome UNKNOWN clone RP11-1278L23, complete sequence
          Length = 221027

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      aaataaaaatatactttttta 24
              |||||||||||||||||||||
Sbjct: 192751 aaataaaaatatactttttta 192771
to top
>gb|AC138701.3| Homo sapiens chromosome 15, clone RP11-79C23, complete sequence
          Length = 145239

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     aaataaaaatatactttttta 24
             |||||||||||||||||||||
Sbjct: 94098 aaataaaaatatactttttta 94078
to top
>gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome unknown, complete
             sequence
          Length = 239189

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    gaaagtatgcattattatttc 84
             |||||||||||||||||||||
Sbjct: 53303 gaaagtatgcattattatttc 53283
to top
>emb|BX546504.9| Mouse DNA sequence from clone RP23-78N22 on chromosome X, complete
            sequence
          Length = 107447

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 64   gaaagtatgcattattatttc 84
            |||||||||||||||||||||
Sbjct: 4440 gaaagtatgcattattatttc 4420
to top
>dbj|AP006217.1| Homo sapiens genomic DNA, chromosome 18, clone:CMF18-52N8, complete
             sequence
          Length = 36071

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     aaataaaaatatactttttta 24
             |||||||||||||||||||||
Sbjct: 24524 aaataaaaatatactttttta 24504
to top
>gb|AC140407.5| Mus musculus BAC clone RP23-142K9 from chromosome unknown, complete
              sequence
          Length = 193404

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 64     gaaagtatgcattattatttc 84
              |||||||||||||||||||||
Sbjct: 193177 gaaagtatgcattattatttc 193157
to top
>gb|U63834.1|HSU63834 Human KIT protein and alternatively spliced KIT protein (KIT) gene,
             complete cds
          Length = 89603

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aaataaaaatatactttttt 23
             ||||||||||||||||||||
Sbjct: 20043 aaataaaaatatactttttt 20024
to top
>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      agaaaataaaaatatactttttta 24
              |||||||| |||||||||||||||
Sbjct: 368483 agaaaatataaatatactttttta 368506
to top
>gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, complete sequence
          Length = 188992

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 67    agtatgcattattatttcccagcagcta 94
             |||| |||||||||||| ||||||||||
Sbjct: 47326 agtaagcattattatttgccagcagcta 47299
to top
>gb|AC145787.2| Xenopus tropicalis clone CH216-117C14, complete sequence
          Length = 150045

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      aataaaaatatactttttta 24
              ||||||||||||||||||||
Sbjct: 144699 aataaaaatatactttttta 144680
to top
>gb|AC149517.2| Xenopus tropicalis clone CH216-47I1, complete sequence
          Length = 65693

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aataaaaatatactttttta 24
             ||||||||||||||||||||
Sbjct: 31682 aataaaaatatactttttta 31663
to top
>gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, complete sequence
          Length = 178925

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 67    agtatgcattattatttcccagcagcta 94
             |||| |||||||||||| ||||||||||
Sbjct: 24138 agtaagcattattatttgccagcagcta 24111
to top
>gb|AF254983.3| Homo sapiens chromosome 21 clone RP11-589M2 map p11-q21.1, complete
              sequence
          Length = 190711

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 67     agtatgcattattatttcccagcagcta 94
              |||| |||||||||||| ||||||||||
Sbjct: 110751 agtaagcattattatttgccagcagcta 110778
to top
>gb|AC134251.3| Mus musculus BAC clone RP23-430D14 from chromosome 3, complete sequence
          Length = 189471

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aaataaaaatatactttttt 23
             ||||||||||||||||||||
Sbjct: 28682 aaataaaaatatactttttt 28701
to top
>gb|AC127277.2| Mus musculus BAC clone RP24-221P14 from chromosome 3, complete
            sequence
          Length = 159339

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    aaataaaaatatactttttt 23
            ||||||||||||||||||||
Sbjct: 1523 aaataaaaatatactttttt 1504
to top
>gb|AC104692.1| Homo sapiens BAC clone RP11-208G20 from 7, complete sequence
          Length = 148606

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 67    agtatgcattattatttcccagcagcta 94
             |||| |||||||||||| ||||||||||
Sbjct: 41953 agtaagcattattatttgccagcagcta 41980
to top
>gb|AC117600.9| Mus musculus chromosome 1, clone RP23-449C20, complete sequence
          Length = 195848

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     agaaaataaaaatatactttttta 24
             |||||||||| |||||||||||||
Sbjct: 73220 agaaaataaatatatactttttta 73197
to top
>ref|XM_670297.1| Plasmodium berghei strain ANKA hypothetical protein (PB000071.03.0)
           partial mRNA
          Length = 2976

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   agaaaataaaaatatactttttta 24
           ||||||||||| ||||||||||||
Sbjct: 963 agaaaataaaattatactttttta 986
to top
>emb|AL121823.12|HSBB212L9 Human DNA sequence from clone RP13-212L9 on chromosome X Contains a
             novel gene, complete sequence
          Length = 185156

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaaataaaaatatacttttt 22
             ||||||||||||||||||||
Sbjct: 79062 aaaataaaaatatacttttt 79081
to top
>emb|AL589701.9| Mouse DNA sequence from clone RP23-202F3 on chromosome 13 Contains a
              novel gene and the 3' end of a novel gene (1190005B03Rik),
              complete sequence
          Length = 219200

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      aaaataaaaatatacttttt 22
              ||||||||||||||||||||
Sbjct: 209625 aaaataaaaatatacttttt 209606
to top
>emb|AL163201.2|HS21C001 Homo sapiens chromosome 21 segment HS21C001
          Length = 281116

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 67     agtatgcattattatttcccagcagcta 94
              |||| |||||||||||| ||||||||||
Sbjct: 159327 agtaagcattattatttgccagcagcta 159354
to top
>gb|AC147836.2| Xenopus tropicalis clone CH216-26D18, complete sequence
          Length = 157688

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ataaaaatatacttttttat 25
             ||||||||||||||||||||
Sbjct: 13244 ataaaaatatacttttttat 13225
to top
>gb|AC147740.3| Xenopus tropicalis BAc clone ISB1-90K22 containing btg1 gene, complete
             cds, complete sequence
          Length = 51057

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ataaaaatatacttttttat 25
             ||||||||||||||||||||
Sbjct: 19885 ataaaaatatacttttttat 19866
to top
>gb|AC006206.3| Homo sapiens 12 BAC RPCI11-319E16 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 180388

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 5      aataaaaatatacttttttatgaa 28
              |||||||||||| |||||||||||
Sbjct: 111020 aataaaaatatagttttttatgaa 110997
to top
>gb|AC120338.4| Homo sapiens X BAC RP11-791N19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 109001

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gaaaataaaaatatactttt 21
             ||||||||||||||||||||
Sbjct: 96138 gaaaataaaaatatactttt 96119
to top
>gb|AC024568.6| Homo sapiens chromosome 5 clone CTD-2179L22, complete sequence
          Length = 128501

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ataaaaatatacttttttat 25
             ||||||||||||||||||||
Sbjct: 23659 ataaaaatatacttttttat 23640
to top
>gb|AC093917.3| Homo sapiens BAC clone RP11-800K23 from 4, complete sequence
          Length = 207691

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gaaaataaaaatatactttt 21
             ||||||||||||||||||||
Sbjct: 95103 gaaaataaaaatatactttt 95084
to top
>gb|AC093303.2| Homo sapiens chromosome 5 clone RP11-61K20, complete sequence
          Length = 163590

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    actgacatccaaatcaaata 122
              ||||||||||||||||||||
Sbjct: 126921 actgacatccaaatcaaata 126940
to top
>gb|AC008493.5| Homo sapiens chromosome 5 clone CTC-427G18, complete sequence
          Length = 107137

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ataaaaatatacttttttat 25
             ||||||||||||||||||||
Sbjct: 62793 ataaaaatatacttttttat 62812
to top
>emb|BX470242.10| Zebrafish DNA sequence from clone CH211-195I24 in linkage group 16,
             complete sequence
          Length = 114149

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ataaaaatatacttttttat 25
             ||||||||||||||||||||
Sbjct: 73334 ataaaaatatacttttttat 73353
to top
>gb|AC013480.12| Homo sapiens BAC clone RP11-564O16 from 2, complete sequence
          Length = 128466

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ataaaaatatacttttttat 25
             ||||||||||||||||||||
Sbjct: 52797 ataaaaatatacttttttat 52816
to top
>gb|AC124243.3| Homo sapiens chromosome 8, clone CTD-3077F2, complete sequence
          Length = 188240

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    agaaaataaaaatatacttt 20
            ||||||||||||||||||||
Sbjct: 2709 agaaaataaaaatatacttt 2728
to top
>gb|AC112197.3| Homo sapiens chromosome 5 clone RP11-442I12, complete sequence
          Length = 175775

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   ataaaaatatacttttttat 25
           ||||||||||||||||||||
Sbjct: 573 ataaaaatatacttttttat 592
to top
>emb|BX088594.5| Zebrafish DNA sequence from clone RP71-1G17 in linkage group 1,
             complete sequence
          Length = 144022

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aataaaaatatactttttta 24
             ||||||||||||||||||||
Sbjct: 37108 aataaaaatatactttttta 37089
to top
>gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 map 4p16, complete sequence
          Length = 185393

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      aaataaaaatatactttttt 23
              ||||||||||||||||||||
Sbjct: 157482 aaataaaaatatactttttt 157463
to top
>gb|AC006226.4|AC006226 Homo sapiens chromosome 4 clone C0011C13 map 4p16, complete sequence
          Length = 162349

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      agaaaataaaaatatacttt 20
              ||||||||||||||||||||
Sbjct: 127948 agaaaataaaaatatacttt 127929
to top
>dbj|AP006246.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-159M14, complete
             sequence
          Length = 178517

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     agaaaataaaaatatacttt 20
             ||||||||||||||||||||
Sbjct: 85572 agaaaataaaaatatacttt 85553
to top
>emb|BX537681.1|HSM806610 Homo sapiens mRNA; cDNA DKFZp686I21208 (from clone DKFZp686I21208)
          Length = 3618

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    agaaaataaaaatatacttt 20
            ||||||||||||||||||||
Sbjct: 2594 agaaaataaaaatatacttt 2613
to top
>gb|AC133180.3| Mus musculus BAC clone RP24-137D2 from chromosome 12, complete sequence
          Length = 123991

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    aagaaagtatgcattattatttcc 85
             ||||||| ||||||||||||||||
Sbjct: 90196 aagaaagaatgcattattatttcc 90219
to top
>emb|BX005022.7| Zebrafish DNA sequence from clone DKEY-6N21 in linkage group 7, complete
              sequence
          Length = 217582

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 1      agaaaataaaaatatacttttttatgaa 28
              |||| ||||||||||| |||||||||||
Sbjct: 170575 agaatataaaaatatagttttttatgaa 170602
to top
>gb|AC163040.5| Mus musculus BAC clone RP23-71C23 from chromosome 12, complete sequence
          Length = 235086

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    aagaaagtatgcattattatttcc 85
             ||||||| ||||||||||||||||
Sbjct: 42204 aagaaagaatgcattattatttcc 42181
to top
>gb|AC147899.2| Xenopus tropicalis clone CH216-53A2, complete sequence
          Length = 158405

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ataaaaatatacttttttat 25
             ||||||||||||||||||||
Sbjct: 95744 ataaaaatatacttttttat 95725
to top
>emb|AL591582.32| Mouse DNA sequence from clone RP23-403P3 on chromosome 12, complete
             sequence
          Length = 168814

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     aaaataaaaatatacttttt 22
             ||||||||||||||||||||
Sbjct: 80840 aaaataaaaatatacttttt 80821
to top
>gb|AC124074.2| Homo sapiens chromosome 8, clone RP11-781O9, complete sequence
          Length = 180673

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     agaaaataaaaatatacttt 20
             ||||||||||||||||||||
Sbjct: 22800 agaaaataaaaatatacttt 22819
to top
>dbj|AB020862.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 5/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     agaaaataaaaatatacttt 20
             ||||||||||||||||||||
Sbjct: 42527 agaaaataaaaatatacttt 42508


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,655,206
Number of Sequences: 3902068
Number of extensions: 3655206
Number of successful extensions: 79897
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79543
Number of HSP's gapped (non-prelim): 354
length of query: 372
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 350
effective length of database: 17,147,199,772
effective search space: 6001519920200
effective search space used: 6001519920200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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