>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein
          Length = 1225

 Score = 58.0 bits (29), Expect = 8e-07
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 3    caaacttggaagacaaattggaattccac 31
            |||||||||||||||||||||||||||||
Sbjct: 1075 caaacttggaagacaaattggaattccac 1047

>gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, complete sequence
          Length = 163936

 Score = 40.1 bits (20), Expect = 0.18
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      ttggaagacaaattggaatt 27
              ||||||||||||||||||||
Sbjct: 159892 ttggaagacaaattggaatt 159873

>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence
          Length = 166503

 Score = 40.1 bits (20), Expect = 0.18
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     ttggaagacaaattggaatt 27
             ||||||||||||||||||||
Sbjct: 50150 ttggaagacaaattggaatt 50131

>gb|AC119279.8| Mus musculus chromosome 8, clone RP24-460J16, complete sequence
          Length = 139356

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    ggaagacaaattggaattc 28
             |||||||||||||||||||
Sbjct: 51083 ggaagacaaattggaattc 51101

>gb|AC169994.1| Rhesus Macaque  BAC CH250-169F18 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 169688

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 4      aaacttggaagacaaattggaat 26
              |||||||||||||||| ||||||
Sbjct: 136247 aaacttggaagacaaagtggaat 136269

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 3       caaacttggaagacaaattggaa 25
               ||||||||| |||||||||||||
Sbjct: 1169280 caaacttggcagacaaattggaa 1169258

>gb|AE014830.1| Plasmodium falciparum 3D7 chromosome 10 section 2 of 7 of the complete
             sequence
          Length = 250029

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     ttggaagacaaattggaa 25
             ||||||||||||||||||
Sbjct: 89186 ttggaagacaaattggaa 89203



 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     ttggaagacaaattggaa 25
             ||||||||||||||||||
Sbjct: 89138 ttggaagacaaattggaa 89155



 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     ttggaagacaaattggaa 25
             ||||||||||||||||||
Sbjct: 89126 ttggaagacaaattggaa 89143



 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     ttggaagacaaattggaa 25
             ||||||||||||||||||
Sbjct: 89114 ttggaagacaaattggaa 89131

>gb|AC024073.7| Homo sapiens chromosome 10 clone RP11-394D15, complete sequence
          Length = 172892

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 5      aacttggaagacaaattggaat 26
              ||||||||||||||| ||||||
Sbjct: 155914 aacttggaagacaaaatggaat 155893

>gb|AC105130.8| Homo sapiens chromosome 8, clone RP11-357L10, complete sequence
          Length = 188410

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    ggaagacaaattggaatt 27
             ||||||||||||||||||
Sbjct: 60596 ggaagacaaattggaatt 60613

>gb|AC013737.5| Homo sapiens chromosome 10 clone RP11-313B15, complete sequence
          Length = 203259

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 5     aacttggaagacaaattggaat 26
             ||||||||||||||| ||||||
Sbjct: 45264 aacttggaagacaaaatggaat 45243

>gb|AC157531.2| Pan troglodytes BAC clone CH251-277G13 from chromosome unknown, complete
              sequence
          Length = 183251

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 5      aacttggaagacaaattggaat 26
              ||||||||||||||| ||||||
Sbjct: 100114 aacttggaagacaaaatggaat 100135

>gb|AC097377.3| Homo sapiens BAC clone RP11-83F13 from 2, complete sequence
          Length = 158923

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 13    agacaaattggaattcca 30
             ||||||||||||||||||
Sbjct: 79429 agacaaattggaattcca 79412

>emb|AL670169.9| Mouse DNA sequence from clone RP23-198C2 on chromosome X, complete
             sequence
          Length = 151698

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     ccaaacttggaagacaaa 19
             ||||||||||||||||||
Sbjct: 31931 ccaaacttggaagacaaa 31914


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 344,793
Number of Sequences: 3902068
Number of extensions: 344793
Number of successful extensions: 78038
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78007
Number of HSP's gapped (non-prelim): 31
length of query: 33
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 13
effective length of database: 17,155,003,908
effective search space: 223015050804
effective search space used: 223015050804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)