Clone Name | rbart53d10 |
---|---|
Clone Library Name | barley_pub |
>SYL_PORGI (Q7MW49) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 925 Score = 30.4 bits (67), Expect = 1.3 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -3 Query: 188 EYLGLTRANYALRDAVFSRPR 126 ++LG + NY LRDA+FSR R Sbjct: 465 KHLGCVKVNYRLRDAIFSRQR 485
>Z585B_PONPY (Q5RB30) Zinc finger protein 585B| Length = 769 Score = 30.4 bits (67), Expect = 1.3 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +2 Query: 86 WMHLDLQEKN*FRDEVLKTRRH 151 W HLDL ++N +RD +L+T H Sbjct: 41 WQHLDLSQRNLYRDVMLETYSH 62
>Z585B_HUMAN (Q52M93) Zinc finger protein 585B (zinc finger protein 41-like| protein) Length = 769 Score = 30.0 bits (66), Expect = 1.7 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +2 Query: 86 WMHLDLQEKN*FRDEVLKTRRH 151 W HLDL ++N +RD +L+T H Sbjct: 41 WRHLDLSQRNLYRDVMLETYSH 62
>SYL_BACTN (Q8A329) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 944 Score = 28.9 bits (63), Expect = 3.7 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 182 LGLTRANYALRDAVFSRPR 126 LG + NY LRDA+FSR R Sbjct: 470 LGRVKVNYRLRDAIFSRQR 488
>SYL_CLOTE (Q898V2) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 812 Score = 27.7 bits (60), Expect = 8.3 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -3 Query: 230 LESDQQR--VFKPLTAEYLGLTRANYALRDAVFSRPR 126 LES + R V + L E LG+ + NY LRD + SR R Sbjct: 383 LESSKGRSAVVEKLEKENLGVKKINYRLRDWLVSRQR 419
>SYL_BACFR (Q64MG4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 943 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -3 Query: 197 LTAEYLGLTRANYALRDAVFSRPR 126 + A LG + N+ LRDA+FSR R Sbjct: 464 IKATGLGRVKVNFRLRDAIFSRQR 487 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,864,004 Number of Sequences: 219361 Number of extensions: 471966 Number of successful extensions: 1137 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1137 length of database: 80,573,946 effective HSP length: 53 effective length of database: 68,947,813 effective search space used: 1654747512 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)