Clone Name | rbart53d03 |
---|---|
Clone Library Name | barley_pub |
>gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA, complete cds Length = 897 Score = 228 bits (115), Expect = 1e-56 Identities = 152/164 (92%), Gaps = 9/164 (5%) Strand = Plus / Minus Query: 226 gataccaaatctagccaatgtatgcatatgattccaaatgatga-------tgagttcag 278 ||||||||||| |||||||| |||||| ||||||||||||||| | ||||||| Sbjct: 895 gataccaaatcaagccaatgcatgcat--gattccaaatgatgagttcggttcagttcag 838 Query: 279 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 778 Query: 339 atgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 atgaccttgtcggccaccagcgtcttgccggactcgttggtgat 734
>gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, complete cds Length = 810 Score = 206 bits (104), Expect = 4e-50 Identities = 104/104 (100%) Strand = Plus / Minus Query: 279 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 751 Query: 339 atgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 atgaccttgtcggccaccagcgtcttgccggactcgttggtgat 707
>gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, complete cds Length = 834 Score = 204 bits (103), Expect = 2e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 272 agttcagcagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagtt 331 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 823 agttcagcagcttcagctgtactggacgatggaacggtagaaggtgctgggcgcccagtt 764 Query: 332 ggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 763 ggccgggatgaccttgtcggccaccagcgacttgccggactcgttggtgat 713
>gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds Length = 948 Score = 133 bits (67), Expect = 5e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 882 ttcagctgtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatga 823 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 |||||| ||| || ||||||||||||||||||||| Sbjct: 822 ccttgttggcgacgagcgtcttgccggactcgttg 788
>gb|AY111405.1| Zea mays CL5426_1 mRNA sequence Length = 528 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 290 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 349 |||||||| |||||| |||||| ||||| |||| ||||||||||||||||||||| || Sbjct: 263 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 322 Query: 350 ggccaccagcgtcttgccggactcgttggtgat 382 ||||||||||||||||||||||||||||||||| Sbjct: 323 ggccaccagcgtcttgccggactcgttggtgat 355
>emb|AJ295942.1|FPR295942 Festuca pratensis mRNA for beta expansin B3 (expB3 gene) Length = 1219 Score = 119 bits (60), Expect = 7e-24 Identities = 93/104 (89%) Strand = Plus / Minus Query: 279 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 338 |||| ||||||| |||||||||||||||||||| ||| |||||| ||||| ||||||||| Sbjct: 911 cagcctcagctgaactggacgatggagcggtaggaggcgctgggggcccaattggccggg 852 Query: 339 atgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 |||| ||||||||| || ||| ||||||||||||||||||||| Sbjct: 851 atgatcttgtcggcgacgagctgcttgccggactcgttggtgat 808 Score = 54.0 bits (27), Expect = 3e-04 Identities = 43/48 (89%), Gaps = 4/48 (8%) Strand = Plus / Minus Query: 119 tattcaagacacacatgca----cgacgacgcctacatgacacccgac 162 |||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1072 tattgaagacacacatgcaggatcgacgacgcctacatgacacccgac 1025 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 acacacaaacagtaataacttatgat 40 |||||||||| ||||||||||||||| Sbjct: 1186 acacacaaactgtaataacttatgat 1161
>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4 (OSJNBa0010C11.2), mRNA Length = 1340 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 969 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 910 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 | |||| ||| || ||||||||||||||||||||| Sbjct: 909 cgttgttggcgacgagcgtcttgccggactcgttg 875
>gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete cds Length = 1249 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 925 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 866 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 | |||| ||| || ||||||||||||||||||||| Sbjct: 865 cgttgttggcgacgagcgtcttgccggactcgttg 831
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 16771 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 16712 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 | |||| ||| || ||||||||||||||||||||| Sbjct: 16711 cgttgttggcgacgagcgtcttgccggactcgttg 16677 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 287 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 346 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 4068 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 4127 Query: 347 gtcggccaccagcgtcttgccggactcgttggtgat 382 | ||| || ||| ||||||||||||||||||||| Sbjct: 4128 gctggcgacgagctgcttgccggactcgttggtgat 4163
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 21341758 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 21341699 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 | |||| ||| || ||||||||||||||||||||| Sbjct: 21341698 cgttgttggcgacgagcgtcttgccggactcgttg 21341664 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 21311303 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 21311362 Query: 346 tgtcggccaccagcgtcttgccgga 370 ||| ||| || |||||||||||||| Sbjct: 21311363 tgttggcgacgagcgtcttgccgga 21311387 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 287 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 346 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 21329054 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 21329113 Query: 347 gtcggccaccagcgtcttgccggactcgttggtgat 382 | ||| || ||| ||||||||||||||||||||| Sbjct: 21329114 gctggcgacgagctgcttgccggactcgttggtgat 21329149 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ccagttggccgggatgacct 345 |||||||||||||||||||| Sbjct: 21317205 ccagttggccgggatgacct 21317224
>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full insert sequence Length = 1290 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 982 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 923 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 | |||| ||| || ||||||||||||||||||||| Sbjct: 922 cgttgttggcgacgagcgtcttgccggactcgttg 888
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full insert sequence Length = 1266 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 975 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 916 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 | |||| ||| || ||||||||||||||||||||| Sbjct: 915 cgttgttggcgacgagcgtcttgccggactcgttg 881
>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full insert sequence Length = 1883 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 1559 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 1500 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 | |||| ||| || ||||||||||||||||||||| Sbjct: 1499 cgttgttggcgacgagcgtcttgccggactcgttg 1465
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full insert sequence Length = 1475 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 1163 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 1104 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 | |||| ||| || ||||||||||||||||||||| Sbjct: 1103 cgttgttggcgacgagcgtcttgccggactcgttg 1069
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full insert sequence Length = 1293 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 981 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 922 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 | |||| ||| || ||||||||||||||||||||| Sbjct: 921 cgttgttggcgacgagcgtcttgccggactcgttg 887
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 283 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 342 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 21353021 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 21352962 Query: 343 ccttgtcggccaccagcgtcttgccggactcgttg 377 | |||| ||| || ||||||||||||||||||||| Sbjct: 21352961 cgttgttggcgacgagcgtcttgccggactcgttg 21352927 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 21322567 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 21322626 Query: 346 tgtcggccaccagcgtcttgccgga 370 ||| ||| || |||||||||||||| Sbjct: 21322627 tgttggcgacgagcgtcttgccgga 21322651 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 287 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 346 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 21340318 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 21340377 Query: 347 gtcggccaccagcgtcttgccggactcgttggtgat 382 | ||| || ||| ||||||||||||||||||||| Sbjct: 21340378 gctggcgacgagctgcttgccggactcgttggtgat 21340413 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ccagttggccgggatgacct 345 |||||||||||||||||||| Sbjct: 21328469 ccagttggccgggatgacct 21328488
>gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence Length = 832 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||| | Sbjct: 303 agctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgt 244 Query: 346 tgtcggccaccagcgtcttgccggactcgttg 377 ||| ||| || ||||||||||||||||||||| Sbjct: 243 tgttggcgacgagcgtcttgccggactcgttg 212
>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds Length = 1479 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||| | Sbjct: 939 agctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgt 880 Query: 346 tgtcggccaccagcgtcttgccggactcgttg 377 ||| ||| || ||||||||||||||||||||| Sbjct: 879 tgttggcgacgagcgtcttgccggactcgttg 848
>gb|BT019137.1| Zea mays clone Contig781.F mRNA sequence Length = 1044 Score = 103 bits (52), Expect = 4e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||| | Sbjct: 564 agctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgt 505 Query: 346 tgtcggccaccagcgtcttgccggactcgttg 377 ||| ||| || ||||||||| ||||||||||| Sbjct: 504 tgttggcgacgagcgtcttggcggactcgttg 473
>gb|AF332175.1|AF332175 Zea mays beta-expansin 2 (expB2) mRNA, partial cds Length = 907 Score = 103 bits (52), Expect = 4e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| | Sbjct: 526 agctgtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgacgt 467 Query: 346 tgtcggccaccagcgtcttgccggactcgttg 377 | ||| || ||||||||||||||||||||| Sbjct: 466 tcctggcgacgagcgtcttgccggactcgttg 435
>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds Length = 1013 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 284 tcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgac 343 ||||||| ||||||||| |||||||||| |||| ||||| |||||||||||||||||| Sbjct: 859 tcagctgaactggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgac 800 Query: 344 cttgtcggccaccagcgtcttgccggactcgttggtgat 382 |||| |||||||||| |||||||||| ||| ||||||| Sbjct: 799 attgttggccaccagcttcttgccggagtcgctggtgat 761
>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds Length = 1056 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 284 tcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgac 343 ||||||| ||||||||| |||||||||| |||| ||||| |||||||||||||||||| Sbjct: 891 tcagctgaactggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgac 832 Query: 344 cttgtcggccaccagcgtcttgccggactcgttggtgat 382 |||| |||||||||| |||||||||| ||| ||||||| Sbjct: 831 attgttggccaccagcttcttgccggagtcgctggtgat 793
>gb|AF332180.1|AF332180 Zea mays beta-expansin 7 (expB7) mRNA, complete cds Length = 1173 Score = 99.6 bits (50), Expect = 6e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 291 tactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcg 350 ||||||||||| || |||||| ||||| ||||| |||||||||| |||||||| | ||| Sbjct: 867 tactggacgatagaacggtagtaggtgttgggcacccagttggcggggatgacatggtca 808 Query: 351 gccaccagcgtcttgccggactcgtt 376 |||||||||||||||||||||||||| Sbjct: 807 gccaccagcgtcttgccggactcgtt 782
>gb|AF332178.1|AF332178 Zea mays beta-expansin 5 (expB5) mRNA, partial cds Length = 650 Score = 87.7 bits (44), Expect = 2e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 290 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 349 |||||| | ||||||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 529 gtactgaatgatggagcggtagtaggtgttgggcgcccagttggcagggatgacccgagt 470 Query: 350 ggccaccagcgtcttgccggactcgttggtga 381 |||||||||| || |||||||||||||||||| Sbjct: 469 ggccaccagcttcctgccggactcgttggtga 438
>gb|AF332176.1|AF332176 Zea mays beta-expansin 3 (expB3) mRNA, partial cds Length = 788 Score = 83.8 bits (42), Expect = 4e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 292 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 351 ||||||||||||||| ||||| | || |||| ||||| ||||| ||||||| ||| | Sbjct: 644 actggacgatggagctgtagacgttgtcgggctgccagtctgccggaatgacctggtccg 585 Query: 352 ccaccagcgtcttgccggactcgttggtga 381 |||||||||||||||||||||||||||||| Sbjct: 584 ccaccagcgtcttgccggactcgttggtga 555
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 292 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 351 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 169422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 169363 Query: 352 ccaccagcgtcttgccggactcgttggtgat 382 | | || ||||||||||||||||||||||| Sbjct: 169362 cgatgagggtcttgccggactcgttggtgat 169332 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 290 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 349 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 157666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 157725 Query: 350 ggccaccagcgtcttgccgga 370 ||||||| |||||||||||| Sbjct: 157726 tgccaccaacgtcttgccgga 157746
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 292 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 351 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 6489 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 6430 Query: 352 ccaccagcgtcttgccggactcgttggtgat 382 | | || ||||||||||||||||||||||| Sbjct: 6429 cgatgagggtcttgccggactcgttggtgat 6399
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 292 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 351 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 103422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 103363 Query: 352 ccaccagcgtcttgccggactcgttggtgat 382 | | || ||||||||||||||||||||||| Sbjct: 103362 cgatgagggtcttgccggactcgttggtgat 103332 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 290 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 349 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 91666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 91725 Query: 350 ggccaccagcgtcttgccgga 370 ||||||| |||||||||||| Sbjct: 91726 tgccaccaacgtcttgccgga 91746
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 292 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 351 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 169422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 169363 Query: 352 ccaccagcgtcttgccggactcgttggtgat 382 | | || ||||||||||||||||||||||| Sbjct: 169362 cgatgagggtcttgccggactcgttggtgat 169332 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 290 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 349 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 157666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 157725 Query: 350 ggccaccagcgtcttgccgga 370 ||||||| |||||||||||| Sbjct: 157726 tgccaccaacgtcttgccgga 157746
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 292 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 351 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 93244 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 93303 Query: 352 ccaccagcgtcttgccggactcgttggtgat 382 | | || ||||||||||||||||||||||| Sbjct: 93304 cgatgagggtcttgccggactcgttggtgat 93334 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 290 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 349 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 105000 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 104941 Query: 350 ggccaccagcgtcttgccgga 370 ||||||| |||||||||||| Sbjct: 104940 tgccaccaacgtcttgccgga 104920
>dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G02, full insert sequence Length = 1027 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 292 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 351 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 834 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 775 Query: 352 ccaccagcgtcttgccggactcgttggtgat 382 | | || ||||||||||||||||||||||| Sbjct: 774 cgatgagggtcttgccggactcgttggtgat 744
>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6 (OSJNBb0014I11.3), mRNA Length = 1240 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 922 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 863 Query: 346 tgtcggccaccagcgtcttgccgga 370 ||| ||| || |||||||||||||| Sbjct: 862 tgttggcgacgagcgtcttgccgga 838
>gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete cds Length = 1210 Score = 73.8 bits (37), Expect = 4e-10 Identities = 77/91 (84%) Strand = Plus / Minus Query: 292 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 351 ||||||||||||||| ||| | |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 1026 actggacgatggagctgtaracggtgttgggctgccagtcggcggggatgacctgatcgg 967 Query: 352 ccaccagcgtcttgccggactcgttggtgat 382 | | || ||||||||||||||||||||||| Sbjct: 966 cgatgagggtcttgccggactcgttggtgat 936
>gb|AF261274.1| Oryza sativa beta-expansin (EXPB6) mRNA, complete cds Length = 1250 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 915 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 856 Query: 346 tgtcggccaccagcgtcttgccgga 370 ||| ||| || |||||||||||||| Sbjct: 855 tgttggcgacgagcgtcttgccgga 831
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 23056 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 22997 Query: 346 tgtcggccaccagcgtcttgccgga 370 ||| ||| || |||||||||||||| Sbjct: 22996 tgttggcgacgagcgtcttgccgga 22972 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 287 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 346 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 5305 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 5246 Query: 347 gtcggccaccagcgtcttgccggactcgttggtgat 382 | ||| || ||| ||||||||||||||||||||| Sbjct: 5245 gctggcgacgagctgcttgccggactcgttggtgat 5210 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccagttggccgggatgacct 345 |||||||||||||||||||| Sbjct: 17154 ccagttggccgggatgacct 17135
>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full insert sequence Length = 1257 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 935 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 876 Query: 346 tgtcggccaccagcgtcttgccgga 370 ||| ||| || |||||||||||||| Sbjct: 875 tgttggcgacgagcgtcttgccgga 851
>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full insert sequence Length = 1257 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 935 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 876 Query: 346 tgtcggccaccagcgtcttgccgga 370 ||| ||| || |||||||||||||| Sbjct: 875 tgttggcgacgagcgtcttgccgga 851
>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full insert sequence Length = 1263 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 941 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 882 Query: 346 tgtcggccaccagcgtcttgccgga 370 ||| ||| || |||||||||||||| Sbjct: 881 tgttggcgacgagcgtcttgccgga 857
>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full insert sequence Length = 1259 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 286 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 345 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 935 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 876 Query: 346 tgtcggccaccagcgtcttgccgga 370 ||| ||| || |||||||||||||| Sbjct: 875 tgttggcgacgagcgtcttgccgga 851
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3 (OSJNBb0014I11.1), mRNA Length = 904 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 287 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 346 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 898 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 839 Query: 347 gtcggccaccagcgtcttgccggactcgttggtgat 382 | ||| || ||| ||||||||||||||||||||| Sbjct: 838 gctggcgacgagctgcttgccggactcgttggtgat 803
>gb|AF261271.1| Oryza sativa beta-expansin (EXPB3) mRNA, complete cds Length = 1319 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 287 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 346 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 897 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 838 Query: 347 gtcggccaccagcgtcttgccggactcgttggtgat 382 | ||| || ||| ||||||||||||||||||||| Sbjct: 837 gctggcgacgagctgcttgccggactcgttggtgat 802
>dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F11, full insert sequence Length = 1031 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 287 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 346 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 653 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 594 Query: 347 gtcggccaccagcgtcttgccggactcgttggtgat 382 | ||| || ||| ||||||||||||||||||||| Sbjct: 593 gctggcgacgagctgcttgccggactcgttggtgat 558
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full insert sequence Length = 1313 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 287 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 346 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 909 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 850 Query: 347 gtcggccaccagcgtcttgccggactcgttggtgat 382 | ||| || ||| ||||||||||||||||||||| Sbjct: 849 gctggcgacgagctgcttgccggactcgttggtgat 814
>gb|DQ428284.1| Sorghum propinquum locus PRC0324 genomic sequence Length = 477 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428283.1| Sorghum bicolor voucher PI585454 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428282.1| Sorghum bicolor voucher PI267539 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428281.1| Sorghum bicolor voucher PI267408 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428280.1| Sorghum bicolor voucher PI221607 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428279.1| Sorghum bicolor voucher PI152702 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428278.1| Sorghum bicolor voucher NSL92371 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428277.1| Sorghum bicolor voucher NSL87902 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428276.1| Sorghum bicolor voucher NSL87666 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428275.1| Sorghum bicolor voucher NSL77217 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428274.1| Sorghum bicolor voucher NSL77034 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428273.1| Sorghum bicolor voucher NSL56174 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428272.1| Sorghum bicolor voucher NSL56003 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428271.1| Sorghum bicolor voucher NSL55243 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428270.1| Sorghum bicolor voucher NSL51365 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428269.1| Sorghum bicolor voucher NSL51030 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428268.1| Sorghum bicolor voucher NSL50875 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428267.1| Sorghum bicolor voucher BTx623 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full insert sequence Length = 1794 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttg 377 ||||| |||||||||||| |||| ||| || ||||||||||||||||||||| Sbjct: 938 ccagtaggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 887
>emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansin B2 (expB2 gene) Length = 1194 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 292 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 351 ||||||||| |||||||||| |||| ||||| ||||||||||||||||| |||| || Sbjct: 884 actggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgatgttgttgg 825 Query: 352 ccaccagcgtcttgccggactcgttggtgat 382 | || ||| ||||||||| ||| ||||||| Sbjct: 824 cgacgagctgcttgccggagtcgctggtgat 794
>gb|AF332179.1|AF332179 Zea mays beta-expansin 6 (expB6) mRNA, complete cds Length = 1142 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 328 agttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 |||||||||||||||| || | |||||||||| | ||||||||||||||||||| Sbjct: 873 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgat 819
>gb|AY104151.1| Zea mays PCO112411 mRNA sequence Length = 1171 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 328 agttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 |||||||||||||||| || | |||||||||| | ||||||||||||||||||| Sbjct: 882 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgat 828
>gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA, complete cds Length = 898 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 326 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 370 |||||||||||||||||| | | ||||||||||||||||||||| Sbjct: 810 ccagttggccgggatgacttgtttggccaccagcgtcttgccgga 766
>dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069H18, full insert sequence Length = 1019 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 290 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 349 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 889 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 830 Query: 350 ggccaccagcgtcttgccgga 370 ||||||| |||||||||||| Sbjct: 829 tgccaccaacgtcttgccgga 809
>gb|AY692478.1| Triticum aestivum beta-expansin EXPB6 mRNA, partial cds Length = 671 Score = 56.0 bits (28), Expect = 9e-05 Identities = 50/58 (86%) Strand = Plus / Minus Query: 325 cccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 |||||| ||| |||||||||| ||||| | ||||||||||||||||||||||| || Sbjct: 327 cccagtcggcggggatgacctgttcggcggcgagcgtcttgccggactcgttggtkat 270
>emb|AJ890019.1| Triticum aestivum mRNA for expansin EXPB11 protein precursor (expb11 gene), cultivar Wyuna, from endosperm tissue Length = 1032 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 336 gggatgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 |||||||||| ||||| || || ||||||||||||||||||||||| Sbjct: 773 gggatgacctgttcggcgacaagtgtcttgccggactcgttggtgat 727
>gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, complete cds Length = 1034 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 332 ggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtga 381 |||||||||||||| |||||| || |||| | |||||||||||| ||||| Sbjct: 904 ggccgggatgacctggtcggcgacgagcgacctgccggactcgtcggtga 855
>gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds Length = 1078 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 333 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 ||||||||||| |||| |||||| |||||||| ||||| ||| ||||||| Sbjct: 794 gccgggatgacattgttggccacaagcgtcttcccggagtcgctggtgat 745
>gb|AF261276.2| Oryza sativa beta-expansin (EXPB8) mRNA, partial cds Length = 933 Score = 50.1 bits (25), Expect = 0.005 Identities = 67/81 (82%) Strand = Plus / Minus Query: 290 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 349 ||||||||||| ||| ||||| |||||| |||||| ||||||| |||||||| | | Sbjct: 807 gtactggacgaaggaacggtaaaaggtgttgggcgtccagttgagggggatgacgtcggg 748 Query: 350 ggccaccagcgtcttgccgga 370 ||||||| |||||||||||| Sbjct: 747 tgccaccaacgtcttgccgga 727
>gb|AY589582.1| Triticum aestivum beta-expansin TaEXPB5 mRNA, complete cds Length = 939 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Minus Query: 333 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 ||||||||| | |||| ||||||||||||||| |||| ||| ||||||| Sbjct: 811 gccgggatggcattgttggccaccagcgtctttccggtatcgctggtgat 762
>dbj|AB041625.1| Brassica rapa BcSL10 gene for SLG-like 10, partial cds Length = 3511 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 250 catatgattccaaatgatgatg 271 |||||||||||||||||||||| Sbjct: 108 catatgattccaaatgatgatg 129
>gb|AY543544.1| Triticum aestivum expansin EXPB10 mRNA, complete cds Length = 1132 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Minus Query: 333 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgat 382 ||||||||| | |||| ||||||||||||||| |||| ||| ||||||| Sbjct: 786 gccgggatggcattgttggccaccagcgtctttccggtatcgctggtgat 737
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 cggccaccagcgtcttgccgg 369 ||||||||||||||||||||| Sbjct: 1260020 cggccaccagcgtcttgccgg 1260040
>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence Length = 398525 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 263 atgatgatgagttcagcagcttcag 287 ||||||||||||| ||||||||||| Sbjct: 345505 atgatgatgagttaagcagcttcag 345481
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 cggccaccagcgtcttgccgg 369 ||||||||||||||||||||| Sbjct: 226686 cggccaccagcgtcttgccgg 226706
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 cggccaccagcgtcttgccgg 369 ||||||||||||||||||||| Sbjct: 274844 cggccaccagcgtcttgccgg 274864
>gb|AC016766.6| Homo sapiens BAC clone RP11-558I6 from 2, complete sequence Length = 194374 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 tgattccaaatgatgatgagt 274 ||||||||||||||||||||| Sbjct: 177950 tgattccaaatgatgatgagt 177930
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ggccaccagcgtcttgccgg 369 |||||||||||||||||||| Sbjct: 2016483 ggccaccagcgtcttgccgg 2016464
>ref|NM_197699.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB2 (OSJNBb0014I11.2), mRNA Length = 1262 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccagttggccgggatgacct 345 |||||||||||||||||||| Sbjct: 813 ccagttggccgggatgacct 794
>gb|AY172516.1| Rhizobium etli transcription repair coupling factor (mfd) gene, partial cds; recombination and repair protein (recG) gene, complete cds; and unknown gene Length = 6176 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gccaccagcgtcttgccgga 370 |||||||||||||||||||| Sbjct: 4669 gccaccagcgtcttgccgga 4650
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 gccaccagcgtcttgccgga 370 |||||||||||||||||||| Sbjct: 2190610 gccaccagcgtcttgccgga 2190629
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 aaggtgctgggcgcccagttggcc 335 |||||||||| ||||||||||||| Sbjct: 2061004 aaggtgctggtcgcccagttggcc 2060981
>gb|AC157813.6| Mus musculus chromosome 1, clone RP24-70I14, complete sequence Length = 177317 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gcacacacaaacagtaataa 32 |||||||||||||||||||| Sbjct: 120092 gcacacacaaacagtaataa 120073
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 gtcggccaccagcgtcttgc 366 |||||||||||||||||||| Sbjct: 4141074 gtcggccaccagcgtcttgc 4141055
>gb|U95968.1|OSU95968 Oryza sativa beta-expansin (EXPB2) mRNA, complete cds Length = 999 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccagttggccgggatgacct 345 |||||||||||||||||||| Sbjct: 813 ccagttggccgggatgacct 794
>dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F04, full insert sequence Length = 1043 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccagttggccgggatgacct 345 |||||||||||||||||||| Sbjct: 812 ccagttggccgggatgacct 793
>emb|BX649380.7| Zebrafish DNA sequence from clone CH211-87P6 in linkage group 4, complete sequence Length = 172167 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 catatgattccaaatgatgatgagttca 277 |||||||||| ||||| ||||||||||| Sbjct: 166340 catatgattctaaatggtgatgagttca 166367
>dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C01, full insert sequence Length = 1259 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccagttggccgggatgacct 345 |||||||||||||||||||| Sbjct: 810 ccagttggccgggatgacct 791
>dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F11, full insert sequence Length = 1026 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccagttggccgggatgacct 345 |||||||||||||||||||| Sbjct: 803 ccagttggccgggatgacct 784
>gb|AC107766.14| Mus musculus chromosome 1, clone RP23-166L24, complete sequence Length = 182865 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcacacacaaacagtaataa 32 |||||||||||||||||||| Sbjct: 7061 gcacacacaaacagtaataa 7080
>gb|AF107020.1|AF107020 Actinomyces naeslundii strain LY7 type-1 fimbrial major subunit precursor (fimP) gene, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggccgggatgaccttgtcgg 351 |||||||||||||||||||| Sbjct: 485 ggccgggatgaccttgtcgg 466
>gb|AF107019.1|AF107019 Actinomyces naeslundii strain P-1-K type-1 fimbrial major subunit precursor (fimP) gene, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggccgggatgaccttgtcgg 351 |||||||||||||||||||| Sbjct: 485 ggccgggatgaccttgtcgg 466
>gb|AF106035.1|AF106035 Actinomyces naeslundii strain B-1-K type-1 fimbrial major subunit precursor (fimP) gene, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggccgggatgaccttgtcgg 351 |||||||||||||||||||| Sbjct: 485 ggccgggatgaccttgtcgg 466
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 gctgggcgcccagttggccgggat 340 ||||||||||||||| |||||||| Sbjct: 594398 gctgggcgcccagtttgccgggat 594375
>gb|M32067.1|ACYFIMBA A.viscosus fimbrial structural protein type 1 subunit gene, complete cds Length = 1850 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggccgggatgaccttgtcgg 351 |||||||||||||||||||| Sbjct: 588 ggccgggatgaccttgtcgg 569 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,170,968 Number of Sequences: 3902068 Number of extensions: 3170968 Number of successful extensions: 60319 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59837 Number of HSP's gapped (non-prelim): 456 length of query: 382 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 360 effective length of database: 17,147,199,772 effective search space: 6172991917920 effective search space used: 6172991917920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)