Clone Name | rbart53d01 |
---|---|
Clone Library Name | barley_pub |
>gb|BC089149.1| Xenopus laevis cDNA clone MGC:85067 IMAGE:6327400, complete cds Length = 3064 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 ttctggaagcctacacgaaga 62 ||||||||||||||||||||| Sbjct: 1622 ttctggaagcctacacgaaga 1642
>gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete sequence Length = 176395 Score = 40.1 bits (20), Expect = 0.92 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gaccaaaccaagttctggaa 49 |||||||||||||||||||| Sbjct: 102983 gaccaaaccaagttctggaa 102964
>gb|AC102792.7| Mus musculus chromosome 7, clone RP23-370I17, complete sequence Length = 215999 Score = 40.1 bits (20), Expect = 0.92 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aaaggctttccctgaccaaa 36 |||||||||||||||||||| Sbjct: 83966 aaaggctttccctgaccaaa 83985
>gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42 of 118 of the complete sequence Length = 220679 Score = 40.1 bits (20), Expect = 0.92 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gaccaaaccaagttctggaa 49 |||||||||||||||||||| Sbjct: 202720 gaccaaaccaagttctggaa 202739
>gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete sequence Length = 189116 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 tagatacatctcaaaggctttcc 27 ||||||||||||||||| ||||| Sbjct: 13617 tagatacatctcaaaggatttcc 13595
>gb|AC009736.10| Drosophila melanogaster clone BACR10A04, complete sequence Length = 165489 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 tagatacatctcaaaggctttcc 27 ||||||||||||||||| ||||| Sbjct: 90512 tagatacatctcaaaggatttcc 90490
>emb|Z83001.1|HSG0453 Human DNA sequence from clone XX-G0453 on chromosome 11, complete sequence Length = 32246 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 aaaggctttccctgaccaa 35 ||||||||||||||||||| Sbjct: 27521 aaaggctttccctgaccaa 27503
>emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chromosome 1 Contains a novel gene, the 5' end of the CAMTA1 gene for calmodulin binding transcription activator 1, a ribosomal protein L37 (RPL37) pseudogene and a CpG island, complete sequence Length = 204394 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 ctttccctgaccaaaccaa 40 ||||||||||||||||||| Sbjct: 66824 ctttccctgaccaaaccaa 66806
>emb|AL355309.27| Human DNA sequence from clone RP11-332E4 on chromosome Xq26.3-27.3 Contains a ribosomal protein L28 (RPL28) pseudogene, complete sequence Length = 94784 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 aggctttccctgaccaaac 37 ||||||||||||||||||| Sbjct: 54404 aggctttccctgaccaaac 54422
>emb|AL035459.6|HS81G23 Human DNA sequence from clone RP1-81G23 on chromosome 20q12 Contains part of the PTPRT gene for protein tyrosine phosphatase receptor type T, ESTs, STS and GSSs, complete sequence Length = 50348 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 45 tggaagcctacacgaagag 63 ||||||||||||||||||| Sbjct: 436 tggaagcctacacgaagag 418
>emb|AL731722.19| Mouse DNA sequence from clone RP23-57M16 on chromosome 4, complete sequence Length = 84483 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 caaaggctttccctgacca 34 ||||||||||||||||||| Sbjct: 58893 caaaggctttccctgacca 58911
>gb|AC113192.3| Homo sapiens chromosome 11, clone RP11-646J21, complete sequence Length = 148308 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 caaaggctttccctgacca 34 ||||||||||||||||||| Sbjct: 14412 caaaggctttccctgacca 14394
>gb|AC132216.7| Homo sapiens chromosome 11, clone RP13-786C16, complete sequence Length = 174373 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 caaaggctttccctgacca 34 ||||||||||||||||||| Sbjct: 15932 caaaggctttccctgacca 15950
>gb|AE003722.4| Drosophila melanogaster chromosome 3R, section 60 of 118 of the complete sequence Length = 221164 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 tagatacatctcaaaggctttcc 27 ||||||||||||||||| ||||| Sbjct: 157750 tagatacatctcaaaggatttcc 157728 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 525,209 Number of Sequences: 3902068 Number of extensions: 525209 Number of successful extensions: 33252 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 33224 Number of HSP's gapped (non-prelim): 28 length of query: 86 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 65 effective length of database: 17,151,101,840 effective search space: 1114821619600 effective search space used: 1114821619600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)