ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart53c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRN... 218 1e-53
2gb|AY103674.1| Zea mays PCO104001 mRNA sequence 218 1e-53
3ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA 210 2e-51
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 210 2e-51
5dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D... 210 2e-51
6dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 2e-51
7gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-... 194 1e-46
8ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA 157 3e-35
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 157 3e-35
10gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genom... 157 3e-35
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
12dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
13dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
14emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribos... 88 2e-14
15gb|AY105798.1| Zea mays PCO089449 mRNA sequence 78 2e-11
16ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural consti... 74 4e-10
17gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like prote... 74 4e-10
18emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, B... 74 4e-10
19gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c... 74 4e-10
20gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c... 74 4e-10
21gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c... 74 4e-10
22emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
23emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
24emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
25emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
26emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal ... 74 4e-10
27gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, com... 70 6e-09
28emb|BX832475.1|CNS0A24D Arabidopsis thaliana Full-length cDNA Co... 68 2e-08
29emb|BX831797.1|CNS0A23Y Arabidopsis thaliana Full-length cDNA Co... 68 2e-08
30emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal pr... 66 9e-08
31gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clon... 64 3e-07
32gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence 54 3e-04
33gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA 54 3e-04
34gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, ... 52 0.001
35dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
36ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6... 44 0.32
37gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989)... 44 0.32
38gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S... 44 0.32
39gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S... 44 0.32
40emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ... 44 0.32
41emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, B... 44 0.32
42emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Co... 44 0.32
43emb|BX827692.1|CNS0A3WM Arabidopsis thaliana Full-length cDNA Co... 44 0.32
44gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6... 44 0.32
45dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone... 44 0.32
46gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence 42 1.3
47gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cance... 42 1.3
48gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete... 40 5.0
49gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosom... 40 5.0
50emb|AL356753.16| Human DNA sequence from clone RP11-481G8 on chr... 40 5.0
51emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1 40 5.0
52gb|DQ399013.1| Ictalurus punctatus clone SAE03 hypothetical prot... 40 5.0
53gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 5.0
54gb|AC158395.2| Mus musculus BAC clone RP23-282I1 from chromosome... 40 5.0
55emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on ch... 40 5.0
56gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 ... 40 5.0
57gb|AE016830.1| Enterococcus faecalis V583, complete genome 40 5.0
58gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.0
59gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complet... 40 5.0
60gb|AC004369.1|AC004369 Drosophila melanogaster DNA sequence (P1 ... 40 5.0 
>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds
          Length = 1023

 Score =  218 bits (110), Expect = 1e-53
 Identities = 161/178 (90%)
 Strand = Plus / Minus

                                                                       
Query: 201 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 260
           |||||||| ||| ||||| ||||| |||||||||||||||| ||||||||| ||||| ||
Sbjct: 803 agccttggcggcggcagaaagcttagacctcctcttggccaagctctcactgcggcggtc 744

                                                                       
Query: 261 cctctgctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 320
           |||||| ||  |||||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 743 cctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 684

                                                                     
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaag 378
           ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 683 cttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggagggtcaag 626
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>gb|AY103674.1| Zea mays PCO104001 mRNA sequence
          Length = 1198

 Score =  218 bits (110), Expect = 1e-53
 Identities = 161/178 (90%)
 Strand = Plus / Minus

                                                                       
Query: 201 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 260
           |||||||| ||| ||||| ||||| |||||||||||||||| ||||||||| ||||| ||
Sbjct: 931 agccttggcggcggcagaaagcttagacctcctcttggccaagctctcactgcggcggtc 872

                                                                       
Query: 261 cctctgctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 320
           |||||| ||  |||||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 871 cctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 812

                                                                     
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaag 378
           ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 811 cttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggagggtcaag 754
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>ref|NM_189879.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1077

 Score =  210 bits (106), Expect = 2e-51
 Identities = 157/174 (90%)
 Strand = Plus / Minus

                                                                       
Query: 201 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 260
           ||||||||  |||| ||| ||||| ||||||||||| |||| |||||| |||||||| ||
Sbjct: 826 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 767

                                                                       
Query: 261 cctctgctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 320
           |||||||||| | |||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 766 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 707

                                                                 
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggt 374
           |||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 706 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggt 653
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  210 bits (106), Expect = 2e-51
 Identities = 157/174 (90%)
 Strand = Plus / Minus

                                                                            
Query: 201      agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 260
                ||||||||  |||| ||| ||||| ||||||||||| |||| |||||| |||||||| ||
Sbjct: 25671571 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 25671512

                                                                            
Query: 261      cctctgctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 320
                |||||||||| | |||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 25671511 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 25671452

                                                                      
Query: 321      cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggt 374
                |||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 25671451 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggt 25671398
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>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0594D10
          Length = 143200

 Score =  210 bits (106), Expect = 2e-51
 Identities = 157/174 (90%)
 Strand = Plus / Minus

                                                                          
Query: 201    agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 260
              ||||||||  |||| ||| ||||| ||||||||||| |||| |||||| |||||||| ||
Sbjct: 125544 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 125485

                                                                          
Query: 261    cctctgctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 320
              |||||||||| | |||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 125484 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 125425

                                                                    
Query: 321    cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggt 374
              |||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 125424 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggt 125371
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>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full
           insert sequence
          Length = 1078

 Score =  210 bits (106), Expect = 2e-51
 Identities = 157/174 (90%)
 Strand = Plus / Minus

                                                                       
Query: 201 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 260
           ||||||||  |||| ||| ||||| ||||||||||| |||| |||||| |||||||| ||
Sbjct: 827 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 768

                                                                       
Query: 261 cctctgctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 320
           |||||||||| | |||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 767 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 708

                                                                 
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggt 374
           |||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 707 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggt 654
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>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds
          Length = 1039

 Score =  194 bits (98), Expect = 1e-46
 Identities = 158/178 (88%)
 Strand = Plus / Minus

                                                                       
Query: 201 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 260
           |||||||| ||| ||||| ||||| |||||||||||||||| |||||| |||||||| ||
Sbjct: 804 agccttggcggcggcagaaagcttggacctcctcttggccaagctctcgctccggcggtc 745

                                                                       
Query: 261 cctctgctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 320
            ||||| ||| |||||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 744 tctctgttccttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 685

                                                                     
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaag 378
           ||| |  ||||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 684 cttagttatcctcttcttcttgtcagcgattctagcacgcttcctctggagggtcaag 627
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>ref|XM_470801.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 983

 Score =  157 bits (79), Expect = 3e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                       
Query: 206 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 265
           ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| |||||||
Sbjct: 771 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 712

                                                                       
Query: 266 gctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 325
           ||||| | |||||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 711 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 652

                                                      
Query: 326 cgatcctcttcttcttgtcggcaattctggcacgcttcctctg 368
           | || || | |||||| | ||| ||||| || | |||||||||
Sbjct: 651 caattctttgcttcttctgggcgattctcgccctcttcctctg 609
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  157 bits (79), Expect = 3e-35
 Identities = 142/163 (87%)
 Strand = Plus / Plus

                                                                            
Query: 206      tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 265
                ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| |||||||
Sbjct: 15460637 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15460696

                                                                            
Query: 266      gctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 325
                ||||| | |||||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 15460697 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 15460756

                                                           
Query: 326      cgatcctcttcttcttgtcggcaattctggcacgcttcctctg 368
                | || || | |||||| | ||| ||||| || | |||||||||
Sbjct: 15460757 caattctttgcttcttctgggcgattctcgccctcttcctctg 15460799
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>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
             sequence
          Length = 164705

 Score =  157 bits (79), Expect = 3e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                         
Query: 206   tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 265
             ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| |||||||
Sbjct: 40889 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 40830

                                                                         
Query: 266   gctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 325
             ||||| | |||||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 40829 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 40770

                                                        
Query: 326   cgatcctcttcttcttgtcggcaattctggcacgcttcctctg 368
             | || || | |||||| | ||| ||||| || | |||||||||
Sbjct: 40769 caattctttgcttcttctgggcgattctcgccctcttcctctg 40727
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  157 bits (79), Expect = 3e-35
 Identities = 142/163 (87%)
 Strand = Plus / Plus

                                                                            
Query: 206      tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 265
                ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| |||||||
Sbjct: 15455171 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15455230

                                                                            
Query: 266      gctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 325
                ||||| | |||||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 15455231 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 15455290

                                                           
Query: 326      cgatcctcttcttcttgtcggcaattctggcacgcttcctctg 368
                | || || | |||||| | ||| ||||| || | |||||||||
Sbjct: 15455291 caattctttgcttcttctgggcgattctcgccctcttcctctg 15455333
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>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full
           insert sequence
          Length = 1018

 Score =  157 bits (79), Expect = 3e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                       
Query: 206 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 265
           ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| |||||||
Sbjct: 769 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 710

                                                                       
Query: 266 gctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 325
           ||||| | |||||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 709 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 650

                                                      
Query: 326 cgatcctcttcttcttgtcggcaattctggcacgcttcctctg 368
           | || || | |||||| | ||| ||||| || | |||||||||
Sbjct: 649 caattctttgcttcttctgggcgattctcgccctcttcctctg 607
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>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full
           insert sequence
          Length = 990

 Score =  157 bits (79), Expect = 3e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                       
Query: 206 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 265
           ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| |||||||
Sbjct: 768 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 709

                                                                       
Query: 266 gctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 325
           ||||| | |||||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 708 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 649

                                                      
Query: 326 cgatcctcttcttcttgtcggcaattctggcacgcttcctctg 368
           | || || | |||||| | ||| ||||| || | |||||||||
Sbjct: 648 caattctttgcttcttctgggcgattctcgccctcttcctctg 606
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>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene)
          Length = 959

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 137/168 (81%)
 Strand = Plus / Minus

                                                                       
Query: 211 gcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctctgctcc 270
           |||||||| ||| | |||||| |||| |||| ||||||||| || || ||||||||||||
Sbjct: 750 gcagcagagagcctggacctcttctttgccaagctctcactgcgtcggtccctctgctcc 691

                                                                       
Query: 271 atcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatc 330
            | ||||||   ||||| ||||||||||| |||||||| || || ||   |||||| |  
Sbjct: 690 ttgagcctcgaggcaaggagcttctggtattctgcagcttcagatttggccttggcaact 631

                                                           
Query: 331 ctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaag 378
           ||||||||||| || ||||||||||| |||||||| || | |||||||
Sbjct: 630 ctcttcttcttctctgcaattctggctcgcttcctttgcaaggtcaag 583
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>gb|AY105798.1| Zea mays PCO089449 mRNA sequence
          Length = 777

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 71/81 (87%), Gaps = 3/81 (3%)
 Strand = Plus / Minus

                                                                       
Query: 262 ctctgctccatcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttc 321
           ||||| ||| |||||||||| ||||| ||||| |||||||| |||||||| |||||||| 
Sbjct: 725 ctctgttccttcagcctctgagcaagaagcttttggtactcggcagcctcagacttctt- 667

                                
Query: 322 ttggcgatcctcttcttcttg 342
             |||||||||||||||||||
Sbjct: 666 --ggcgatcctcttcttcttg 648
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>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome
           AT5G10360 (EMB3010) mRNA, complete cds
          Length = 1095

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||| |||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 700 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 644
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>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete
           cds
          Length = 1032

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                       
Query: 289 agcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggca 348
           |||||||| || || ||||| ||||||||   |||||| || ||||||||||||||||||
Sbjct: 698 agcttctgataatcagcagcttctgacttagccttggcaattctcttcttcttgtcggca 639

                                        
Query: 349 attctggcacgcttcctctggagggtcaa 377
           ||||| || | |||||||||||| |||||
Sbjct: 638 attcttgctctcttcctctggagagtcaa 610
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>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project)
          Length = 113053

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                       
Query: 321    cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
              ||||||||| |||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 105992 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 105936
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>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 750

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||| |||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 615 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 559
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>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 993

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||| |||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 700 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 644
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>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 993

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||| |||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 700 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 644
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>emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH74ZH01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 689

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||| |||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 361 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 305
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>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 969

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||| |||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 683 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 627
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>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB52ZB07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 981

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||| |||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 681 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 625
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>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS15ZE05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 947

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||| |||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 681 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 625
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>emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal protein S6, partial
          Length = 920

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 118/145 (81%)
 Strand = Plus / Minus

                                                                       
Query: 233 tcttggccatgctctcactccggcgatccctctgctccatcagcctctgtgcaagcagct 292
           |||| |||| ||||||||| ||||| |||||||||||| |||  ||   |||||| || |
Sbjct: 593 tctttgccaagctctcacttcggcgttccctctgctccttcaatctggatgcaaggagtt 534

                                                                       
Query: 293 tctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggcaattc 352
           | || |||||||| |||||||| ||   |||||| || ||||||||||| || |||||||
Sbjct: 533 tttgatactctgctgcctctgattttgccttggcaattctcttcttcttatctgcaattc 474

                                    
Query: 353 tggcacgcttcctctggagggtcaa 377
           | || |||||||| ||||| |||||
Sbjct: 473 ttgctcgcttcctttggagtgtcaa 449
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>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds
          Length = 1020

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 116/143 (81%)
 Strand = Plus / Minus

                                                                       
Query: 220 agcttcgacctcctcttggccatgctctcactccggcgatccctctgctccatcagcctc 279
           ||||| || |||||||| ||||  |||||||| ||||| || ||||||||| ||| ||| 
Sbjct: 778 agcttggatctcctcttagccaaactctcactgcggcggtctctctgctccttcaacctg 719

                                                                       
Query: 280 tgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttc 339
              ||||| || |||||||||||||| ||||| || ||   |||||| ||||||||||||
Sbjct: 718 gaggcaaggagtttctggtactctgctgcctcagattttgccttggcaatcctcttcttc 659

                                  
Query: 340 ttgtcggcaattctggcacgctt 362
           || || |||||||| || |||||
Sbjct: 658 ttatcagcaattcttgcccgctt 636
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>emb|BX832475.1|CNS0A24D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH75ZG03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 645

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggt 374
           ||||||||| |||||||||||||| |||||||| || | |||||||||||||||
Sbjct: 351 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggt 298
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>emb|BX831797.1|CNS0A23Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH2ZH10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 692

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggt 374
           ||||||||| |||||||||||||| |||||||| || | |||||||||||||||
Sbjct: 363 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggt 310
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>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6
          Length = 957

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           |||||| || |||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 615 cttggctattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 559
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>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete
             sequence
          Length = 106476

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 122/152 (80%)
 Strand = Plus / Plus

                                                                         
Query: 226   gacctcctcttggccatgctctcactccggcgatccctctgctccatcagcctctgtgca 285
             |||||| |||||||||  |||||||| |||||||| | ||||||| | |||||    || 
Sbjct: 89251 gacctcttcttggccaaactctcactacggcgatcacgctgctccttaagcctggaggcg 89310

                                                                         
Query: 286   agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 345
             || |||||||||||||| || || || |  ||   ||| || ||||||||||||||||||
Sbjct: 89311 agaagcttctggtactcagccgcatcagcgttagccttagcaatcctcttcttcttgtcg 89370

                                             
Query: 346   gcaattctggcacgcttcctctggagggtcaa 377
             |||||||| || | ||||||||| || |||||
Sbjct: 89371 gcaattctagctctcttcctctgaagagtcaa 89402
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>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence
          Length = 1067

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 342
           ||||| |||||||| || || || |||||||||||   |||||| || ||||||||||||
Sbjct: 716 gcaagaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttg 657

                      
Query: 343 tcggcaattct 353
           || ||||||||
Sbjct: 656 tcagcaattct 646
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>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA
          Length = 1056

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 342
           ||||| |||||||| || || || |||||||||||   |||||| || ||||||||||||
Sbjct: 700 gcaagaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttg 641

                      
Query: 343 tcggcaattct 353
           || ||||||||
Sbjct: 640 tcagcaattct 630
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>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds
          Length = 980

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 328 atcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||||||||||| || ||||| || | ||||||||| ||||||||
Sbjct: 665 atcctcttcttcttgtcagcgattctagctctcttcctctgaagggtcaa 616
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>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full
           insert sequence
          Length = 1049

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 264 ctgctccatcagcctctgtgcaagcagcttctggtactctgcagcctctg 313
           ||||||| ||||||||||  | |||||||| ||||||||||| |||||||
Sbjct: 731 ctgctccttcagcctctggacgagcagcttgtggtactctgctgcctctg 682
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>ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6); structural
           constituent of ribosome AT4G31700 (RPS6) mRNA, complete
           cds
          Length = 993

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 332 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||||||| |||||||| || | ||||||||| || |||||
Sbjct: 615 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaa 570
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>gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989) putative
           ribosomal protein S6 (At4g31700) mRNA, complete cds
          Length = 962

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 332 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||||||| |||||||| || | ||||||||| || |||||
Sbjct: 617 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaa 572
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>gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700)
           mRNA, complete cds
          Length = 784

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 332 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||||||| |||||||| || | ||||||||| || |||||
Sbjct: 604 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaa 559
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>gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700)
           mRNA, complete cds
          Length = 989

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 332 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||||||| |||||||| || | ||||||||| || |||||
Sbjct: 611 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaa 566
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>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                            
Query: 332    tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
              ||||||||||||| |||||||| || | ||||||||| || |||||
Sbjct: 112399 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaa 112444
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>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII
             project)
          Length = 90902

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 332   tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
             ||||||||||||| |||||||| || | ||||||||| || |||||
Sbjct: 40872 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaa 40827
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>emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZD05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 938

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 332 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||||||| |||||||| || | ||||||||| || |||||
Sbjct: 600 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaa 555
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>emb|BX827692.1|CNS0A3WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH10ZH02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 580

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 332 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||||||| |||||||| || | ||||||||| || |||||
Sbjct: 222 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaa 177
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>gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6 (rps6) mRNA, complete cds
          Length = 945

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 332 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           ||||||||||||| |||||||| || | ||||||||| || |||||
Sbjct: 604 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaa 559
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>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114,
             complete sequence
          Length = 94533

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                         
Query: 244   ctctcactccggcgatccctctgctccatcagcctctgtgcaagcagcttctggtactct 303
             ||||| || ||||| |||||||||||| ||| |||    ||||| || |||||||| |||
Sbjct: 19580 ctctcgctacggcgttccctctgctccttcaacctggaggcaagtagtttctggtattct 19521

                                                               
Query: 304   gcagcctctgacttcttcttggcgatcctcttcttcttgtcggcaattct 353
             || |||||||| ||    ||||| || ||||||||||| || ||||||||
Sbjct: 19520 gctgcctctgattttgctttggcaattctcttcttcttatctgcaattct 19471
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>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence
          Length = 1065

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 321 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaa 377
           |||||| || |||||||||||||| || ||||| || | ||||||||| || |||||
Sbjct: 686 cttggcaattctcttcttcttgtcagcgattcttgctctcttcctctgaagagtcaa 630
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>gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168186

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    caaatttgtccattcagtaac 33
             |||||||||||||||||||||
Sbjct: 25889 caaatttgtccattcagtaac 25869
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>gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete sequence
          Length = 168540

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   cttcttggcgatcctcttct 337
             ||||||||||||||||||||
Sbjct: 18677 cttcttggcgatcctcttct 18658
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>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence
          Length = 223991

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   cctcttggccatgctctcac 250
             ||||||||||||||||||||
Sbjct: 82373 cctcttggccatgctctcac 82354
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>emb|AL356753.16| Human DNA sequence from clone RP11-481G8 on chromosome 10 Contains the
              5'end of a novel gene containing FLJ40930, gene FLJ35875,
              the RAI17 gene for retinoic acid induced 17, a novel gene
              and two CpG islands, complete sequence
          Length = 183460

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    ccctctgctccatcagcctc 279
              ||||||||||||||||||||
Sbjct: 133136 ccctctgctccatcagcctc 133155
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>emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1
          Length = 347582

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    tgcaaatttgtccattcagt 30
             ||||||||||||||||||||
Sbjct: 60916 tgcaaatttgtccattcagt 60935
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>gb|DQ399013.1| Ictalurus punctatus clone SAE03 hypothetical protein mRNA, partial
           cds
          Length = 539

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 aagcagagacagccggagcc 204
           ||||||||||||||||||||
Sbjct: 89  aagcagagacagccggagcc 108
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     tcggcaattctggcacgctt 362
               ||||||||||||||||||||
Sbjct: 4123462 tcggcaattctggcacgctt 4123443
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>gb|AC158395.2| Mus musculus BAC clone RP23-282I1 from chromosome 14, complete sequence
          Length = 220498

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    tgctccatcagcctctgtgc 284
              ||||||||||||||||||||
Sbjct: 213636 tgctccatcagcctctgtgc 213617
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>emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on chromosome 14, complete
              sequence
          Length = 170436

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    tgctccatcagcctctgtgc 284
              ||||||||||||||||||||
Sbjct: 130665 tgctccatcagcctctgtgc 130684
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>gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 of 83 of the complete
              sequence
          Length = 303641

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    cttcttggcgatcctcttct 337
              ||||||||||||||||||||
Sbjct: 202386 cttcttggcgatcctcttct 202367
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 17      tttgtccattcagtaacaaa 36
               ||||||||||||||||||||
Sbjct: 1268193 tttgtccattcagtaacaaa 1268174
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 324     ggcgatcctcttcttcttgtcggc 347
               ||||||| ||||||||||||||||
Sbjct: 3860237 ggcgatcgtcttcttcttgtcggc 3860260
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>gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complete sequence
          Length = 165737

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   cctcttggccatgctctcac 250
             ||||||||||||||||||||
Sbjct: 14193 cctcttggccatgctctcac 14212
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>gb|AC004369.1|AC004369 Drosophila melanogaster DNA sequence (P1 DS07066 (D70)), complete
             sequence
          Length = 77798

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   cttcttggcgatcctcttct 337
             ||||||||||||||||||||
Sbjct: 64172 cttcttggcgatcctcttct 64191


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,729,539
Number of Sequences: 3902068
Number of extensions: 3729539
Number of successful extensions: 76288
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 76087
Number of HSP's gapped (non-prelim): 199
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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