Clone Name | rbart53c01 |
---|---|
Clone Library Name | barley_pub |
>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 112 bits (279), Expect = 3e-25 Identities = 51/68 (75%), Positives = 61/68 (89%) Frame = -1 Query: 381 VLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVADVEALAKE 202 VLFGDNDPA++KPKFGTYW+K+GKV+G FLEGG+ DEN+AIAKVARA+P V DV LA+E Sbjct: 366 VLFGDNDPASSKPKFGTYWIKEGKVVGAFLEGGTPDENKAIAKVARAKPAVEDVNQLAEE 425 Query: 201 GLDFATKI 178 GL FA+KI Sbjct: 426 GLSFASKI 433
>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic| isoform 1 (EC 1.6.5.4) (MDAR 1) Length = 441 Score = 107 bits (267), Expect = 7e-24 Identities = 49/67 (73%), Positives = 59/67 (88%) Frame = -1 Query: 381 VLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVADVEALAKE 202 VLFGDNDP + KPKFGTYWVKDGKV+GVFLEGG+ +E++AIAKVARAQP V ++ L++E Sbjct: 369 VLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGGTQEEHKAIAKVARAQPSVESLDVLSEE 428 Query: 201 GLDFATK 181 GL FATK Sbjct: 429 GLSFATK 435
>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic| isoform 4 (EC 1.6.5.4) (MDAR 4) Length = 435 Score = 103 bits (256), Expect = 1e-22 Identities = 47/68 (69%), Positives = 56/68 (82%) Frame = -1 Query: 381 VLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVADVEALAKE 202 VLFGDNDP + KPKFG+YW+K+ KV+G FLEGGS +EN AIAK+ARAQP V +E L+KE Sbjct: 368 VLFGDNDPESPKPKFGSYWIKERKVVGAFLEGGSPEENNAIAKLARAQPSVESLEVLSKE 427 Query: 201 GLDFATKI 178 GL FAT I Sbjct: 428 GLSFATNI 435
>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC| 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) Length = 434 Score = 94.4 bits (233), Expect = 6e-20 Identities = 43/68 (63%), Positives = 53/68 (77%) Frame = -1 Query: 381 VLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVADVEALAKE 202 VLFGDN P +A KFG+YW+KDGKV+G FLE GS +EN+AIAKVAR QP V + L KE Sbjct: 367 VLFGDNSPDSATHKFGSYWIKDGKVVGAFLESGSPEENKAIAKVARIQPSVESSDLLLKE 426 Query: 201 GLDFATKI 178 G+ FA+K+ Sbjct: 427 GISFASKV 434
>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 92.0 bits (227), Expect = 3e-19 Identities = 43/68 (63%), Positives = 55/68 (80%) Frame = -1 Query: 381 VLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVADVEALAKE 202 VLFGD DP +A KFG YW+KDGK++G FLE GS +EN+AIAKVA+ QPP A ++ LA+E Sbjct: 367 VLFGDADPNSATHKFGQYWIKDGKIVGAFLESGSPEENKAIAKVAKVQPP-ATLDQLAQE 425 Query: 201 GLDFATKI 178 G+ FA+KI Sbjct: 426 GISFASKI 433
>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic| isoform 3 (EC 1.6.5.4) (MDAR 3) Length = 434 Score = 92.0 bits (227), Expect = 3e-19 Identities = 39/68 (57%), Positives = 54/68 (79%) Frame = -1 Query: 381 VLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVADVEALAKE 202 VLFGD++P+ KP+FG YWV+ GKV+G F+EGGS DEN+A+AKVA+A+P ++ L K+ Sbjct: 367 VLFGDSNPSNPKPRFGAYWVQGGKVVGAFMEGGSGDENKALAKVAKARPSAESLDELVKQ 426 Query: 201 GLDFATKI 178 G+ FA KI Sbjct: 427 GISFAAKI 434
>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic| isoform 2 (EC 1.6.5.4) (MDAR 2) Length = 488 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%) Frame = -1 Query: 339 FGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVA-DVEALAKEGLDFA 187 FG YWVK G ++G FLEGG+ +E + I+K + +P V D+E L +EGL FA Sbjct: 374 FGAYWVKKGHLVGSFLEGGTKEEYETISKATQLKPAVTIDLEELEREGLGFA 425
>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)| (MDAR fruit) (Ascorbate free radical reductase fruit) (AFR reductase fruit) (Fragments) Length = 166 Score = 53.5 bits (127), Expect = 1e-07 Identities = 32/59 (54%), Positives = 37/59 (62%) Frame = -1 Query: 381 VLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVADVEALAK 205 VLF DN FGTYW+K V+GVFLEGG+ DE KVAR QPPV ++ LAK Sbjct: 123 VLFPDN--------FGTYWIK---VVGVFLEGGTPDE----YKVARVQPPVESLDQLAK 166
>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC| 1.6.5.4) (MDAR) Length = 493 Score = 47.4 bits (111), Expect = 9e-06 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 5/71 (7%) Frame = -1 Query: 375 FGDNDPAAAK-----PKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVADVEAL 211 FGDN + PK T+W++ G++ GV +E GS +E Q + K+AR+QP V + Sbjct: 416 FGDNVGETVEVGNFDPKIATFWIESGRLKGVLVESGSPEEFQLLPKLARSQPLVDKAKLA 475 Query: 210 AKEGLDFATKI 178 + ++ A +I Sbjct: 476 SASSVEEALEI 486
>ALG14_ASPFU (Q4WNB5) UDP-N-acetylglucosamine transferase subunit alg14 (EC| 2.4.1.-) (Asparagine linked glycosylation protein 14) Length = 228 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -1 Query: 372 GDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQ 238 GDN AA +F T W+K + G ++ E+ A+ V RA+ Sbjct: 25 GDNFSAARAVEFETEWLKQSPKLSFPANGSNSTESYAVVTVPRAR 69
>K6PP_MOUSE (Q9WUA3) 6-phosphofructokinase type C (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme C) (PFK-C) Length = 784 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -1 Query: 369 DNDPAAAKPKFGTYWVKDGKVIGVFLEGGSAD-ENQAIAKVAR 244 D+ ++A PK+ + DGK IGV GG A N A+ V R Sbjct: 5 DSSSSSAYPKYLEHLSGDGKAIGVLTSGGDAQGMNAAVRAVVR 47
>6PGL_PSEAE (Q9X2N2) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)| Length = 238 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = -1 Query: 294 LEGGSADENQAIAKVARAQPPVADVEALAKEGLDFA 187 L A++ QA+ V+ + PVA +EAL++E LD++ Sbjct: 35 LRSALAEQGQALLVVSGGRSPVAFLEALSEEPLDWS 70
>CP061_MOUSE (Q8K199) C16orf61 protein homolog| Length = 79 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 8/46 (17%) Frame = +1 Query: 13 LNLLKSCHS--------GHSNTIKLQKEKKKSNHVSELGTRKHRQG 126 +NLLK CH GH N + + K N SE TR G Sbjct: 18 INLLKECHKNHNILKFFGHCNDLDREMRKCLKNEYSERRTRSREHG 63
>PRP4B_MOUSE (Q61136) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)| (PRP4 pre-mRNA-processing factor 4 homolog) (Pre-mRNA protein kinase) Length = 1007 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +1 Query: 34 HSGHSNTIKLQKEK-KKSNHVSELGTRKHRQGRDKHKIYTRR*IIEES 174 HS H + K KK H SE K + + KHK + R+ +IE S Sbjct: 41 HSRHKKKKHKHRSKHKKHKHSSEEDRDKKHKHKHKHKKHKRKEVIEAS 88
>HTPG_RALSO (Q8Y0Q3) Chaperone protein htpG (Heat shock protein htpG) (High| temperature protein G) Length = 640 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = -1 Query: 369 DNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVAR 244 D+D AA K K+ T+W G+V+ L A++++ IAK+ R Sbjct: 370 DSDDAAEKDKYATFWQHFGQVLKEGLGEDFANKDR-IAKLLR 410
>PYRE_PHOPR (Q6LVN7) Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRT)| (OPRTase) Length = 213 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = -1 Query: 342 KFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVADVEALAKEGLDF 190 KFG + +K G+V F G + + +A++ R EAL G+D+ Sbjct: 19 KFGEFTLKSGRVSPYFFNAGLFNTGRDLARLGRFY-----AEALVDAGIDY 64
>NIP29_YEAST (P33419) Protein NIP29| Length = 253 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = +1 Query: 43 HSNTIKLQKEKKKSNHVSELGTRKHRQGRDK 135 H +K +E+ S++ SELG +KH + +++ Sbjct: 26 HEEALKKLREENFSSNTSELGNKKHYRAQER 56
>YIID_ECOLI (P0ADQ2) Hypothetical protein yiiD| Length = 329 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -1 Query: 378 LFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADE 271 +FGD P A GTY V K G + EGG+ +E Sbjct: 296 IFGDETPGAVFE--GTYIVLPAKPFGPYEEGGNEEE 329
>YIID_ECOL6 (P0ADQ3) Hypothetical protein yiiD| Length = 329 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -1 Query: 378 LFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADE 271 +FGD P A GTY V K G + EGG+ +E Sbjct: 296 IFGDETPGAVFE--GTYIVLPAKPFGPYEEGGNEEE 329
>YIID_ECO57 (P0ADQ4) Hypothetical protein yiiD| Length = 329 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -1 Query: 378 LFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADE 271 +FGD P A GTY V K G + EGG+ +E Sbjct: 296 IFGDETPGAVFE--GTYIVLPAKPFGPYEEGGNEEE 329 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,889,383 Number of Sequences: 219361 Number of extensions: 676268 Number of successful extensions: 2408 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2371 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2405 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)