Clone Name | rbart53a06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | emb|AL445932.12| Human DNA sequence from clone RP11-533L1 on chr... | 40 | 4.7 | 2 | emb|CT033797.5| Mouse DNA sequence from clone RP23-451J17 on chr... | 40 | 4.7 | 3 | emb|BX000479.11| Mouse DNA sequence from clone RP23-139I16 on ch... | 40 | 4.7 | 4 | emb|AL805921.7| Mouse DNA sequence from clone RP23-293N9 on chro... | 40 | 4.7 |
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>emb|AL445932.12| Human DNA sequence from clone RP11-533L1 on chromosome 6 Contains the 5' end of a novel gene, complete sequence Length = 163650 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 ctattttaacattaatttagcagt 166 ||||||||||||||||| |||||| Sbjct: 16208 ctattttaacattaattcagcagt 16185
>emb|CT033797.5| Mouse DNA sequence from clone RP23-451J17 on chromosome 17, complete sequence Length = 177126 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 tcaggctggcctccatcgcttggg 337 ||||||||||||||| |||||||| Sbjct: 90162 tcaggctggcctccaacgcttggg 90139
>emb|BX000479.11| Mouse DNA sequence from clone RP23-139I16 on chromosome X, complete sequence Length = 145084 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gatacaaacaagaggaacat 90 |||||||||||||||||||| Sbjct: 5690 gatacaaacaagaggaacat 5709
>emb|AL805921.7| Mouse DNA sequence from clone RP23-293N9 on chromosome 4, complete sequence Length = 162090 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 attttaacattaatttagca 164 |||||||||||||||||||| Sbjct: 138324 attttaacattaatttagca 138305 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,320,122 Number of Sequences: 3902068 Number of extensions: 2320122 Number of successful extensions: 43735 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43725 Number of HSP's gapped (non-prelim): 10 length of query: 354 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 332 effective length of database: 17,147,199,772 effective search space: 5692870324304 effective search space used: 5692870324304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)