>PDIA6_PONPY (Q5R6T1) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)|
          Length = 440

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = -2

Query: 346 GRGGKGNLPLEGAPTVVQSEPWDGKDGEVIEEDEFSLEELMADSFAPNDEL 194
           GRG    +     PT+V+ EPWDG+DGE+  ED+  L ++  D     DEL
Sbjct: 391 GRGSTAPVGGGAFPTIVEREPWDGRDGELPVEDDIDLSDVELDDLG-KDEL 440

>PDIA6_HUMAN (Q15084) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)|
           (Protein disulfide isomerase P5) (Thioredoxin
           domain-containing protein 7)
          Length = 440

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = -2

Query: 346 GRGGKGNLPLEGAPTVVQSEPWDGKDGEVIEEDEFSLEELMADSFAPNDEL 194
           GRG    +     PT+V+ EPWDG+DGE+  ED+  L ++  D     DEL
Sbjct: 391 GRGSTAPVGGGAFPTIVEREPWDGRDGELPVEDDIDLSDVELDDLG-KDEL 440

>PDIA6_MOUSE (Q922R8) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)|
           (Thioredoxin domain-containing protein 7)
          Length = 440

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 21/51 (41%), Positives = 27/51 (52%)
 Frame = -2

Query: 346 GRGGKGNLPLEGAPTVVQSEPWDGKDGEVIEEDEFSLEELMADSFAPNDEL 194
           GRG    +     PT+   EPWDGKDGE+  ED+  L ++  D     DEL
Sbjct: 391 GRGSTAPVGGGSFPTITPREPWDGKDGELPVEDDIDLSDVELDDL-EKDEL 440

>PDIA6_RAT (Q63081) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)|
           (Protein disulfide isomerase P5) (Calcium-binding
           protein 1) (CaBP1) (Thioredoxin domain-containing
           protein 7)
          Length = 440

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -2

Query: 346 GRGGKGNLPLEGAPTVVQSEPWDGKDGEVIEEDEFSLEELMADSFAPNDEL 194
           GRG    +     P +   EPWDGKDGE+  ED+  L ++  D     DEL
Sbjct: 391 GRGSTAPVGGGSFPNITPREPWDGKDGELPVEDDIDLSDVELDDL-EKDEL 440

>PDIA6_CAEEL (Q11067) Probable protein disulfide-isomerase A6 precursor (EC|
           5.3.4.1)
          Length = 440

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -2

Query: 346 GRGGKGNLPLEGAPTVVQSEPWDGKDGEVIEEDEFSLEELMAD 218
           G+G   +L  +G P + ++E WDGKDG +  ED+  L ++  D
Sbjct: 394 GKGRTSSLRGDGFPKIQKTEKWDGKDGALPAEDDIDLSDIDLD 436

>PDIA6_MESAU (P38660) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)|
           (Protein disulfide isomerase P5)
          Length = 439

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -2

Query: 355 KEAGRGGKGNLPLEGA--PTVVQSEPWDGKDGEVIEEDEFSLEELMADSFAPNDEL 194
           +E   G     P+ G   P +   EPWDG+DGE+  ED+  L ++  D     DEL
Sbjct: 385 RELSFGRASTAPVGGGSFPAITAREPWDGRDGELPVEDDIDLSDVELDDL-EKDEL 439

>PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment)|
          Length = 174

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 289 PTGPPSGRPPEEGCPFRRALPP 354
           P G P GRPP++G P +   PP
Sbjct: 100 PPGKPEGRPPQQGGPGKPERPP 121

>PO2F1_XENLA (P16143) POU domain, class 2, transcription factor 1|
           (Octamer-binding transcription factor 1) (Oct-1) (OTF-1)
           (NF-A1) (XOct1)
          Length = 760

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
 Frame = +2

Query: 32  GHPHTLHT-----RAFSHNANIEIKKRHSKKCPVQIVQCTHQNK*SISVPLNATMVRESQ 196
           GH H +       +A +H+ N++ K +     P+Q+VQ + Q     ++P    MV   Q
Sbjct: 66  GHLHQVQLAGTSLQAAAHSLNVQTKFKEEPGEPMQVVQPSQQPSLQAAIPQTQLMVAGGQ 125

Query: 197 L 199
           +
Sbjct: 126 I 126

>IRF6_HUMAN (O14896) Interferon regulatory factor 6 (IRF-6)|
          Length = 467

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 307 PTVVQSEPWDGKDGEVIEEDE 245
           P    S PWD KD +V EEDE
Sbjct: 126 PGSTGSAPWDEKDNDVDEEDE 146

>NPD_AERPE (Q9YB13) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein|
           SIR2 homolog)
          Length = 247

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 11/34 (32%)
 Frame = -1

Query: 86  SQC*HCGRKL-W----------CARCGGVLAPEI 18
           ++C  CG KL W          C RCGGVL P++
Sbjct: 126 ARCTRCGSKLEWREKPSNLPPSCPRCGGVLRPDV 159

>RS3_HALSA (P15009) 30S ribosomal protein S3P (HS4) (HHAS3)|
          Length = 302

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = -2

Query: 295 QSEPWDGKDGEVIEEDEFSLEEL--MADSFAPNDE 197
           +SEP D +D EVIE D+   EEL  +AD+    DE
Sbjct: 238 ESEPADFEDEEVIETDDDVEEELDELADAVEGEDE 272

>DPYL4_HUMAN (O14531) Dihydropyrimidinase-related protein 4 (DRP-4) (Collapsin|
           response mediator protein 3) (CRMP-3) (UNC33-like
           phosphoprotein 4) (ULIP4 protein)
          Length = 572

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 283 MVPTGPPSGRPPEEGCPFRRALPP 354
           MVP  P SG P    CP + ++PP
Sbjct: 507 MVPAKPGSGAPARASCPGKISVPP 530

>ECO1_KLULA (Q6CW60) N-acetyltransferase ECO1 (EC 2.3.1.-) (Establishment of|
           cohesion protein 1)
          Length = 271

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 109 VSRPNCTV-YTSEQVKHQCSSKRYHGSRITTRRWAQS 216
           V  P C++ Y++         KRYH   +  +RW+QS
Sbjct: 26  VKCPKCSITYSTNSPSDLVQHKRYHDLHLNGKRWSQS 62

>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)|
          Length = 1285

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -2

Query: 289 EPWDGKDGEVIEEDEFSLEELMADSFAPNDEL*FS--NHGSV 170
           EPWD   GE+   +E  LE  +++ + PND   ++  N+G V
Sbjct: 342 EPWDA--GELTASEELELENDVSNGWDPNDMFRYNEENYGVV 381

>MA2B2_PONPY (Q5RDJ3) Epididymis-specific alpha-mannosidase precursor (EC|
            3.2.1.24) (Mannosidase alpha class 2B member 2)
          Length = 1009

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 350  GRARRKGQPSSGGRPDGGPVGTM 282
            G  RR+G  +S  RP GGP+ T+
Sbjct: 972  GSGRRRGDTTSPSRPPGGPIITV 994

>HTPG_BURPS (Q63W07) Chaperone protein htpG (Heat shock protein htpG) (High|
           temperature protein G)
          Length = 632

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 307 PTVVQSEPWDGKDGEVIEEDE 245
           P +++ E WD + GE++E+DE
Sbjct: 206 PILMKKEEWDQEKGEMVEKDE 226

>HTPG_BURMA (Q62ID1) Chaperone protein htpG (Heat shock protein htpG) (High|
           temperature protein G)
          Length = 632

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 307 PTVVQSEPWDGKDGEVIEEDE 245
           P +++ E WD + GE++E+DE
Sbjct: 206 PILMKKEEWDQEKGEMVEKDE 226

>PUR7_FUSNN (Q8REV1) Phosphoribosylaminoimidazole-succinocarboxamide synthase|
           (EC 6.3.2.6) (SAICAR synthetase)
          Length = 237

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 352 EAGRGGKGNLPLEGAPTVVQSEPWDGKDGEVIEEDEF 242
           E G+  KG + L    T      WD K GE +++D F
Sbjct: 179 EFGKNSKGEILLADEITPDTCRLWDKKTGEKLDKDRF 215

>CB029_HUMAN (Q9UKZ1) Protein C2orf29|
          Length = 510

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = -1

Query: 353 GGRARRKGQPSSGGRPDGGPVGTMXXXXXXXXXXXRVLARGAHGG 219
           GGR    G P SG    GGP G M            +++  A GG
Sbjct: 39  GGRGGASG-PGSGSGGPGGPAGRMSLTPKELSSLLSIISEEAGGG 82

>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)|
          Length = 415

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 289 PTGPPSGRPPEEGCPFRRALPP 354
           P  PP+ RPP    P R+A PP
Sbjct: 268 PGAPPAARPPASPSPQRQAGPP 289

>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)|
          Length = 704

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 289 PTGPPSGRPPEEGCPFRRALPP 354
           P  PP+ RPP    P R+A PP
Sbjct: 538 PGAPPAARPPASPSPQRQAGPP 559

>SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)|
          Length = 705

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 289 PTGPPSGRPPEEGCPFRRALPP 354
           P  PP+ RPP    P R+A PP
Sbjct: 540 PGAPPAARPPASPSPQRQAGPP 561


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,425,034
Number of Sequences: 219361
Number of extensions: 985083
Number of successful extensions: 3573
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3566
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)