>gb|AY112452.1| Zea mays CL286_2 mRNA sequence
          Length = 1510

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                        
Query: 214  agctgtccgccatgagctcctcgagcgagaactcgtcctcctcgatgacctctccatcct 273
            |||||||  |||||||||| ||||| ||||| || |||||||| |||||||||||||| |
Sbjct: 1347 agctgtcgcccatgagctcgtcgagggagaattcatcctcctcaatgacctctccatctt 1288

                                                                        
Query: 274  tgccgtcccatggttccgactggaccaccgtcggggcgccctccagaggaaggttgccct 333
            |||||||||| || || |||  ||| || || || ||  | | |||||||||||| ||||
Sbjct: 1287 tgccgtcccacggctcggacgcgactactgtaggtgcatcgttcagaggaaggtttccct 1228

                                   
Query: 334  ttccgccgcgccctgcctccttc 356
            |||| || |||||||||||||||
Sbjct: 1227 ttccaccacgccctgcctccttc 1205

>gb|AY739290.1| Zea mays protein disulfide isomerase (PDIL2-3) mRNA, complete cds
          Length = 1531

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                        
Query: 214  agctgtccgccatgagctcctcgagcgagaactcgtcctcctcgatgacctctccatcct 273
            |||||||  |||||||||| ||||| ||||| || |||||||| |||||||||||||| |
Sbjct: 1347 agctgtcgcccatgagctcgtcgagggagaattcatcctcctcaatgacctctccatctt 1288

                                                                        
Query: 274  tgccgtcccatggttccgactggaccaccgtcggggcgccctccagaggaaggttgccct 333
            |||||||||| || || |||  ||| || || || ||  | | |||||||||||| ||||
Sbjct: 1287 tgccgtcccacggctcggacgcgactactgtaggtgcatcgttcagaggaaggtttccct 1228

                                   
Query: 334  ttccgccgcgccctgcctccttc 356
            |||| || |||||||||||||||
Sbjct: 1227 ttccaccacgccctgcctccttc 1205

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 116/140 (82%)
 Strand = Plus / Minus

                                                                            
Query: 217      tgtccgccatgagctcctcgagcgagaactcgtcctcctcgatgacctctccatccttgc 276
                |||| ||||| |||||||| || ||||| |||||||| || || ||||| ||||| ||||
Sbjct: 16881010 tgtcggccatcagctcctcaagggagaattcgtcctcttcaataacctcaccatctttgc 16880951

                                                                            
Query: 277      cgtcccatggttccgactggaccaccgtcggggcgccctccagaggaaggttgccctttc 336
                ||||||||||||| || ||||| | ||| ||||  || |||| |||||| || ||||| |
Sbjct: 16880950 cgtcccatggttcagattggactatcgttggggtaccgtccaaaggaagattacccttcc 16880891

                                    
Query: 337      cgccgcgccctgcctccttc 356
                | ||||||||||| ||||||
Sbjct: 16880890 caccgcgccctgcttccttc 16880871

>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0488D02
          Length = 154537

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 116/140 (82%)
 Strand = Plus / Minus

                                                                         
Query: 217   tgtccgccatgagctcctcgagcgagaactcgtcctcctcgatgacctctccatccttgc 276
             |||| ||||| |||||||| || ||||| |||||||| || || ||||| ||||| ||||
Sbjct: 10823 tgtcggccatcagctcctcaagggagaattcgtcctcttcaataacctcaccatctttgc 10764

                                                                         
Query: 277   cgtcccatggttccgactggaccaccgtcggggcgccctccagaggaaggttgccctttc 336
             ||||||||||||| || ||||| | ||| ||||  || |||| |||||| || ||||| |
Sbjct: 10763 cgtcccatggttcagattggactatcgttggggtaccgtccaaaggaagattacccttcc 10704

                                 
Query: 337   cgccgcgccctgcctccttc 356
             | ||||||||||| ||||||
Sbjct: 10703 caccgcgccctgcttccttc 10684

>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1163_C07
          Length = 107121

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 116/140 (82%)
 Strand = Plus / Minus

                                                                         
Query: 217   tgtccgccatgagctcctcgagcgagaactcgtcctcctcgatgacctctccatccttgc 276
             |||| ||||| |||||||| || ||||| |||||||| || || ||||| ||||| ||||
Sbjct: 78701 tgtcggccatcagctcctcaagggagaattcgtcctcttcaataacctcaccatctttgc 78642

                                                                         
Query: 277   cgtcccatggttccgactggaccaccgtcggggcgccctccagaggaaggttgccctttc 336
             ||||||||||||| || ||||| | ||| ||||  || |||| |||||| || ||||| |
Sbjct: 78641 cgtcccatggttcagattggactatcgttggggtaccgtccaaaggaagattacccttcc 78582

                                 
Query: 337   cgccgcgccctgcctccttc 356
             | ||||||||||| ||||||
Sbjct: 78581 caccgcgccctgcttccttc 78562

>dbj|AK072941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F04, full
            insert sequence
          Length = 1738

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 116/140 (82%)
 Strand = Plus / Minus

                                                                        
Query: 217  tgtccgccatgagctcctcgagcgagaactcgtcctcctcgatgacctctccatccttgc 276
            |||| ||||| |||||||| || ||||| |||||||| || || ||||| ||||| ||||
Sbjct: 1543 tgtcggccatcagctcctcaagggagaattcgtcctcttcaataacctcaccatctttgc 1484

                                                                        
Query: 277  cgtcccatggttccgactggaccaccgtcggggcgccctccagaggaaggttgccctttc 336
            ||||||||||||| || ||||| | ||| ||||  || |||| |||||| || ||||| |
Sbjct: 1483 cgtcccatggttcagattggactatcgttggggtaccgtccaaaggaagattacccttcc 1424

                                
Query: 337  cgccgcgccctgcctccttc 356
            | ||||||||||| ||||||
Sbjct: 1423 caccgcgccctgcttccttc 1404

>dbj|AK062254.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G06, full
            insert sequence
          Length = 1642

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 110/133 (82%)
 Strand = Plus / Minus

                                                                        
Query: 217  tgtccgccatgagctcctcgagcgagaactcgtcctcctcgatgacctctccatccttgc 276
            |||| ||||| |||||||| || ||||| |||||||| || || ||||| ||||| ||||
Sbjct: 1399 tgtcggccatcagctcctcaagggagaattcgtcctcttcaataacctcaccatctttgc 1340

                                                                        
Query: 277  cgtcccatggttccgactggaccaccgtcggggcgccctccagaggaaggttgccctttc 336
            ||||||||||||| || ||||| | ||| ||||  || |||| |||||| || ||||| |
Sbjct: 1339 cgtcccatggttcagattggactatcgttggggtaccgtccaaaggaagattacccttcc 1280

                         
Query: 337  cgccgcgccctgc 349
            | |||||||||||
Sbjct: 1279 caccgcgccctgc 1267

>gb|AC011382.4| Homo sapiens chromosome 5 clone CTB-13H5, complete sequence
          Length = 86829

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 86    ataaagaaaaggcattccaaaaagtg 111
             |||||||| |||||||||||||||||
Sbjct: 50467 ataaagaataggcattccaaaaagtg 50492

>gb|AC023745.3| Drosophila melanogaster X BAC RP98-26N1 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179312

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      agctcaaaactggttttattt 22
              |||||||||||||||||||||
Sbjct: 143837 agctcaaaactggttttattt 143857

>gb|AC023693.4| Drosophila melanogaster X BAC RP98-17B23 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 164969

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     agctcaaaactggttttattt 22
             |||||||||||||||||||||
Sbjct: 48491 agctcaaaactggttttattt 48511

>emb|BX511005.6| Zebrafish DNA sequence from clone DKEY-72N1 in linkage group 5,
             complete sequence
          Length = 139111

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 119   caaattgtacagtgtacacat 139
             |||||||||||||||||||||
Sbjct: 59485 caaattgtacagtgtacacat 59505

>gb|AE004686.1| Pseudomonas aeruginosa PAO1, section 247 of 529 of the complete
            genome
          Length = 10905

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 252  tcctcgatgacctctccatcc 272
            |||||||||||||||||||||
Sbjct: 9036 tcctcgatgacctctccatcc 9016

>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence
          Length = 188691

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    taaagaaaaggcattccaaaa 107
             |||||||||||||||||||||
Sbjct: 24672 taaagaaaaggcattccaaaa 24692

>gb|AE003484.3| Drosophila melanogaster chromosome X, section 36 of 74 of the complete
              sequence
          Length = 314111

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      agctcaaaactggttttattt 22
              |||||||||||||||||||||
Sbjct: 198888 agctcaaaactggttttattt 198908

>ref|XM_483499.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1345

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  tgacctctccatccttgccg 278
            ||||||||||||||||||||
Sbjct: 1050 tgacctctccatccttgccg 1031

>gb|AC110913.13| Mus musculus chromosome 19, clone RP24-399E19, complete sequence
          Length = 208309

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 325   ggttgccctttccgccgcgccctgcctccttc 356
             ||||||||||||| || | |||||||||||||
Sbjct: 75976 ggttgccctttccccctctccctgcctccttc 76007

>gb|AC158606.14| Mus musculus 10 BAC RP24-456P10 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 162274

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ctaacattgagataaagaaa 94
             ||||||||||||||||||||
Sbjct: 38331 ctaacattgagataaagaaa 38312

>ref|XM_953631.1| Neurospora crassa OR74A hypothetical protein (NCU09658.1) partial
            mRNA
          Length = 3048

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  tcctcgatgacctctccatc 271
            ||||||||||||||||||||
Sbjct: 1370 tcctcgatgacctctccatc 1351

>ref|XM_330307.1| Neurospora crassa OR74A hypothetical protein (NCU09658.1) partial
            mRNA
          Length = 3048

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  tcctcgatgacctctccatc 271
            ||||||||||||||||||||
Sbjct: 1370 tcctcgatgacctctccatc 1351

>gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, complete sequence
          Length = 171061

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gagaactcgtcctcctcgat 259
              ||||||||||||||||||||
Sbjct: 170896 gagaactcgtcctcctcgat 170915

>gb|AC131669.3| Mus musculus BAC clone RP23-307E9 from chromosome 7, complete sequence
          Length = 189956

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     tgctaacattgagataaaga 92
              ||||||||||||||||||||
Sbjct: 127402 tgctaacattgagataaaga 127383

>gb|AC113198.15| Mus musculus chromosome 14, clone RP23-248E15, complete sequence
          Length = 236220

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     agataaagaaaaggcattcc 103
              ||||||||||||||||||||
Sbjct: 140406 agataaagaaaaggcattcc 140387

>gb|AC122250.4| Mus musculus BAC clone RP23-167A3 from chromosome 19, complete sequence
          Length = 202060

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     caaggacacccccacacctt 48
              ||||||||||||||||||||
Sbjct: 137450 caaggacacccccacacctt 137469

>emb|AJ224870.1|SCAJ4870 Streptomyces clavuligerus lexA, nrdR & nrdJ genes
          Length = 5940

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  ctcgtcctcctcgatgacct 264
            ||||||||||||||||||||
Sbjct: 5665 ctcgtcctcctcgatgacct 5646

>gb|AC162304.4| Mus musculus chromosome 7, clone RP23-350J16, complete sequence
          Length = 219899

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gagaactcgtcctcctcgat 259
             ||||||||||||||||||||
Sbjct: 33851 gagaactcgtcctcctcgat 33870

>gb|AC114407.24| Mus musculus chromosome 10, clone RP23-51G1, complete sequence
          Length = 143388

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   ctaacattgagataaagaaa 94
            ||||||||||||||||||||
Sbjct: 5674 ctaacattgagataaagaaa 5693

>emb|AL096814.26|HSDJ139D8 Human DNA sequence from clone RP1-139D8 on chromosome 6p12.1-21.1
              Contains genes for GUCA1A (guanylate cyclase activator 1A)
              and GUCA1B (guanylate cyclase activator 1B) both from
              retina, the 3' end of the TReP-132 gene for zinc finger
              transcription regulating protein, the MRPS10 gene for
              mitochondrial ribosomal protein S10, the 5' end the gene
              for a novel protein, the gene for a novel protein and two
              CpG Islands, complete sequence
          Length = 167078

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     cacccccacaccttgcacac 54
              ||||||||||||||||||||
Sbjct: 147301 cacccccacaccttgcacac 147320

>gb|AC080066.6| Homo sapiens BAC clone CTD-2321M19 from 7, complete sequence
          Length = 75793

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    aagaaaaggcattccaaaaa 108
             ||||||||||||||||||||
Sbjct: 16415 aagaaaaggcattccaaaaa 16396

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 259      tgacctctccatccttgccg 278
                ||||||||||||||||||||
Sbjct: 26540041 tgacctctccatccttgccg 26540060

>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702E04
          Length = 190948

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   tgacctctccatccttgccg 278
             ||||||||||||||||||||
Sbjct: 88908 tgacctctccatccttgccg 88927

>dbj|AP000388.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MRI12
          Length = 18212

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   aagaaaaggcattccaaaaa 108
            ||||||||||||||||||||
Sbjct: 9513 aagaaaaggcattccaaaaa 9494

>dbj|AK119370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-H09, full
            insert sequence
          Length = 2945

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 259  tgacctctccatccttgccg 278
            ||||||||||||||||||||
Sbjct: 1139 tgacctctccatccttgccg 1158

>dbj|AK073978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N21, full
            insert sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  tgacctctccatccttgccg 278
            ||||||||||||||||||||
Sbjct: 1050 tgacctctccatccttgccg 1031

>tpe|BN000648.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx119 gene for
            class III peroxidase 119 precursor, exons 1-3
          Length = 2477

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  tgacctctccatccttgccg 278
            ||||||||||||||||||||
Sbjct: 2448 tgacctctccatccttgccg 2429

>emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-932A10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 222275

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    cacccccacaccttgcacac 54
             ||||||||||||||||||||
Sbjct: 61935 cacccccacaccttgcacac 61916

>emb|BX005253.10| Mouse DNA sequence from clone RP23-300D2 on chromosome X, complete
             sequence
          Length = 135141

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    caccagagctttctcccaca 71
             ||||||||||||||||||||
Sbjct: 90871 caccagagctttctcccaca 90890

>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    ggaccaccgtcggggcgccc 314
              ||||||||||||||||||||
Sbjct: 157627 ggaccaccgtcggggcgccc 157646

>emb|AL135758.32| Mouse DNA sequence from clone RP21-117J5 on chromosome 5, complete
           sequence
          Length = 142667

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  caccagagctttctcccaca 71
           ||||||||||||||||||||
Sbjct: 690 caccagagctttctcccaca 709


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,830,226
Number of Sequences: 3902068
Number of extensions: 2830226
Number of successful extensions: 53618
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53513
Number of HSP's gapped (non-prelim): 105
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)