ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart52g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chr... 42 0.068
2gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome... 40 0.27
3gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, co... 40 0.27
4ref|XM_672351.1| Plasmodium berghei strain ANKA hypothetical pro... 40 0.27
5gb|AC163335.6| Mus musculus chromosome 7, clone RP24-149G13, com... 38 1.1
6emb|CT009638.5| Zebrafish DNA sequence from clone CH73-162A18 in... 38 1.1
7gb|AC074384.7| Homo sapiens BAC clone RP11-374N8 from 7, complet... 38 1.1
8emb|AL135939.12| Human DNA sequence from clone RP3-481F12 on chr... 38 1.1
9gb|AC151369.4| Aotus nancymaae clone CH258-279B4, complete sequence 36 4.2
10gb|AC164429.3| Mus musculus BAC clone RP24-127N11 from chromosom... 36 4.2
11ref|XM_419709.1| PREDICTED: Gallus gallus similar to dJ20N2.1.1 ... 36 4.2
12gb|AC117586.10| Mus musculus chromosome 3, clone RP23-166M8, com... 36 4.2
13gb|AC161356.6| Mus musculus chromosome 1, clone wi1-2612I11, com... 36 4.2
14gb|AC103355.9| Mus musculus chromosome 14, clone RP24-482C10, co... 36 4.2
15emb|CT009708.6| Mouse DNA sequence from clone RP23-82F10 on chro... 36 4.2
16gb|AC127355.4| Mus musculus BAC clone RP23-96F6 from chromosome ... 36 4.2
17gb|AC124500.5| Mus musculus BAC clone RP24-69C19 from chromosome... 36 4.2
18gb|AC148562.3| Callicebus moloch clone LB5-363C5, complete sequence 36 4.2
19gb|AC156613.9| Mus musculus chromosome 1, clone RP24-139P17, com... 36 4.2
20emb|BX571818.3| Human DNA sequence from clone RP11-38J22 on chro... 36 4.2
21emb|AL512782.6| Human DNA sequence from clone RP11-464I4 on chro... 36 4.2
22emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on ch... 36 4.2
23emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O... 36 4.2
24emb|AL096861.9|HSDJ824H1 Human DNA sequence from clone RP5-824H1... 36 4.2
25emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4,... 36 4.2
26emb|BX470184.9| Zebrafish DNA sequence from clone CH211-214H13 i... 36 4.2
27gb|AC120838.10| Pan troglodytes clone ch251-239a19, complete seq... 36 4.2
28gb|AC066593.4| Homo sapiens chromosome 3 clone RP11-344O5 map 3p... 36 4.2
29gb|AC079222.17| Mus musculus chromosome 1, clone RP22-292L24, co... 36 4.2
30gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, co... 36 4.2
31emb|BX930226.2| Gallus gallus finished cDNA, clone ChEST588d8 36 4.2
32emb|BX933249.2| Gallus gallus finished cDNA, clone ChEST513k3 36 4.2
33emb|CR352558.1| Gallus gallus finished cDNA, clone ChEST342f4 36 4.2
34dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 36 4.2
35gb|AC150259.4| Aedes aegypti, clone XX-10B1, complete sequence 36 4.2
36gb|AC163761.3| Pan troglodytes BAC clone CH251-214O19 from chrom... 36 4.2
37gb|AC092684.2| Homo sapiens BAC clone RP11-746G4 from 2, complet... 36 4.2
38emb|BX935688.1| Gallus gallus finished cDNA, clone ChEST755p12 36 4.2
39gb|AC068448.10| Homo sapiens chromosome 15, clone RP11-624A21, c... 36 4.2
40gb|AC116898.11| Mus musculus chromosome 7, clone RP24-531E8, com... 36 4.2
41emb|BX005004.12| Zebrafish DNA sequence from clone DKEY-11L18, c... 36 4.2
42emb|AL929555.20| Mouse DNA sequence from clone RP24-427F7 on chr... 36 4.2
43gb|AC005157.1|AC005157 Homo sapiens PAC clone RP5-1108A12 from 1... 36 4.2
44gb|U41625.1| Caenorhabditis elegans cosmid K03A1, complete sequence 36 4.2
45emb|CR933768.7| Zebrafish DNA sequence from clone CH211-176D22 i... 36 4.2
46emb|AL032657.1|CEY47H9C Caenorhabditis elegans YAC Y47H9C, compl... 36 4.2
47dbj|AP003558.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 36 4.2
48gb|AC145363.4| Dasypus novemcinctus clone VMRC5-356N21, complete... 36 4.2
49dbj|AP001984.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 36 4.2
50dbj|AP003394.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 36 4.2
51emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 i... 36 4.2
52emb|BX004845.5| Zebrafish DNA sequence from clone CH211-67O1, co... 36 4.2
53emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in ... 36 4.2
54gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 36 4.2
55gb|AC102227.17| Mus musculus chromosome 1, clone RP24-62C22, com... 36 4.2
56emb|AL670360.8| Mouse DNA sequence from clone RP23-3A4 on chromo... 36 4.2
57dbj|AP004249.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 36 4.2 
>emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chromosome 11, complete
             sequence
          Length = 114581

 Score = 42.1 bits (21), Expect = 0.068
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     cagaaaactcacttttttaac 26
             |||||||||||||||||||||
Sbjct: 25467 cagaaaactcacttttttaac 25447
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>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence
          Length = 176868

 Score = 40.1 bits (20), Expect = 0.27
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     agaaaactcacttttttaac 26
             ||||||||||||||||||||
Sbjct: 36980 agaaaactcacttttttaac 36999
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>gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, complete sequence
          Length = 168641

 Score = 40.1 bits (20), Expect = 0.27
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     agaaaactcacttttttaac 26
             ||||||||||||||||||||
Sbjct: 49680 agaaaactcacttttttaac 49661
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>ref|XM_672351.1| Plasmodium berghei strain ANKA hypothetical protein (PB102533.00.0)
            partial mRNA
          Length = 2103

 Score = 40.1 bits (20), Expect = 0.27
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    gttacagaaaactcactttt 21
            ||||||||||||||||||||
Sbjct: 1898 gttacagaaaactcactttt 1879
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>gb|AC163335.6| Mus musculus chromosome 7, clone RP24-149G13, complete sequence
          Length = 164660

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    aaactcacttttttaacat 28
             |||||||||||||||||||
Sbjct: 82973 aaactcacttttttaacat 82991
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>emb|CT009638.5| Zebrafish DNA sequence from clone CH73-162A18 in linkage group 6,
             complete sequence
          Length = 101890

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 7     agaaaactcacttttttaacatc 29
             |||||||||||||||| ||||||
Sbjct: 83209 agaaaactcactttttcaacatc 83231
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>gb|AC074384.7| Homo sapiens BAC clone RP11-374N8 from 7, complete sequence
          Length = 92118

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     acagaaaactcactttttt 23
             |||||||||||||||||||
Sbjct: 53730 acagaaaactcactttttt 53712
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>emb|AL135939.12| Human DNA sequence from clone RP3-481F12 on chromosome 20 Contains the
             SPO11 gene for SPO11 meiotic protein covalently bound to
             DSB (S. cerevisiae)-like protein, the 5' end of the RAE1
             gene for an mRNA export protein, an MTND1 (NADH
             dehydrogenase subunit 1) pseudogene, a RPL39 (ribosomal
             protein L39) pseudogene and a CpG island, complete
             sequence
          Length = 66033

 Score = 38.2 bits (19), Expect = 1.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     gttacagaaaactcacttt 20
             |||||||||||||||||||
Sbjct: 19913 gttacagaaaactcacttt 19895
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>gb|AC151369.4| Aotus nancymaae clone CH258-279B4, complete sequence
          Length = 196485

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     gttacagaaaactcactt 19
             ||||||||||||||||||
Sbjct: 41448 gttacagaaaactcactt 41431
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>gb|AC164429.3| Mus musculus BAC clone RP24-127N11 from chromosome 14, complete
             sequence
          Length = 169281

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     cagaaaactcactttttt 23
             ||||||||||||||||||
Sbjct: 53633 cagaaaactcactttttt 53616
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>ref|XM_419709.1| PREDICTED: Gallus gallus similar to dJ20N2.1.1 (novel protein
           similar to yeast and bacterial cytosine deaminase,
           variant 1) (LOC421670), mRNA
          Length = 729

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 20  ttttaacatctccactgc 37
           ||||||||||||||||||
Sbjct: 535 ttttaacatctccactgc 518
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>gb|AC117586.10| Mus musculus chromosome 3, clone RP23-166M8, complete sequence
          Length = 215166

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 13    ctcacttttttaacatct 30
             ||||||||||||||||||
Sbjct: 97340 ctcacttttttaacatct 97357
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>gb|AC161356.6| Mus musculus chromosome 1, clone wi1-2612I11, complete sequence
          Length = 38492

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     gaaaactcacttttttaa 25
             ||||||||||||||||||
Sbjct: 36802 gaaaactcacttttttaa 36819
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>gb|AC103355.9| Mus musculus chromosome 14, clone RP24-482C10, complete sequence
          Length = 192348

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 6      cagaaaactcactttttt 23
              ||||||||||||||||||
Sbjct: 145674 cagaaaactcactttttt 145657
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>emb|CT009708.6| Mouse DNA sequence from clone RP23-82F10 on chromosome 9, complete
             sequence
          Length = 247670

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 1     ggttacagaaaactcact 18
             ||||||||||||||||||
Sbjct: 76291 ggttacagaaaactcact 76274
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>gb|AC127355.4| Mus musculus BAC clone RP23-96F6 from chromosome 7, complete sequence
          Length = 150343

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 3      ttacagaaaactcacttt 20
              ||||||||||||||||||
Sbjct: 142647 ttacagaaaactcacttt 142630
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>gb|AC124500.5| Mus musculus BAC clone RP24-69C19 from chromosome 6, complete sequence
          Length = 190224

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 22    ttaacatctccactgcat 39
             ||||||||||||||||||
Sbjct: 75635 ttaacatctccactgcat 75618
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>gb|AC148562.3| Callicebus moloch clone LB5-363C5, complete sequence
          Length = 217859

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 2      gttacagaaaactcactt 19
              ||||||||||||||||||
Sbjct: 117027 gttacagaaaactcactt 117010
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>gb|AC156613.9| Mus musculus chromosome 1, clone RP24-139P17, complete sequence
          Length = 132714

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 8      gaaaactcacttttttaa 25
              ||||||||||||||||||
Sbjct: 132630 gaaaactcacttttttaa 132647
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>emb|BX571818.3| Human DNA sequence from clone RP11-38J22 on chromosome 1 Contains a
             novel gene, a ribosomal protein L22 (RPL22) pseudogene, a
             novel gene, the AVPR1B gene for arginine vasopressin
             receptor 1B, two novel genes, the CTSE gene for cathepsin
             E and two CpG islands, complete sequence
          Length = 170924

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 5     acagaaaactcacttttt 22
             ||||||||||||||||||
Sbjct: 43489 acagaaaactcacttttt 43506
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>emb|AL512782.6| Human DNA sequence from clone RP11-464I4 on chromosome 13, complete
             sequence
          Length = 186266

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 10    aaactcacttttttaaca 27
             ||||||||||||||||||
Sbjct: 97302 aaactcacttttttaaca 97285
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>emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on chromosome 10 Contains the
              3' end of a novel gene (FLJ13031) (FLJ40349), the ITGB1
              gene for integrin beta 1 (fibronectin receptor beta
              polypeptide antigen CD29 includes MDF2 MSK12), an adenylate
              kinase 3 like 1 (AK3L1) pseudogene, a novel gene, the 5'
              end of a novel gene, a NADH dehydrogenase subunit 4L (ND4L)
              pseudogene, a pseudogene similar to part of integrin beta 2
              (antigen CD18 (p95) lymphocyte function-associated antigen
              1; macrophage antigen 1 (mac-1) beta subunit) (ITGB2) and a
              CpG island, complete sequence
          Length = 197973

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 6      cagaaaactcactttttt 23
              ||||||||||||||||||
Sbjct: 100492 cagaaaactcactttttt 100475
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>emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O4 on chromosome 20q11.1-12
             Contains the C20orf127 locus for a metallothionein protein
             pseudogene, the MMP24 gene for matrix metalloproteinase 24
             (membrane-inserted), a novel gene, the ITGB4BP gene for
             integrin beta 4 binding protein, the C20orf120 gene for
             chromosome 20 open reading frame 120, the C20orf128 gene
             for chromosome 20 open reading frame 128, the 3' end of
             the C20orf44 gene for chromosome 20 open reading frame 44
             and three CpG islands, complete sequence
          Length = 150481

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 3     ttacagaaaactcactttttta 24
             ||||| ||||||||||||||||
Sbjct: 28970 ttacaaaaaactcactttttta 28991
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>emb|AL096861.9|HSDJ824H1 Human DNA sequence from clone RP5-824H1 on chromosome Xq27.1-28,
             complete sequence
          Length = 129686

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                       
Query: 4     tacagaaaactcacttttttaacatc 29
             ||||||||||||||||| | ||||||
Sbjct: 31995 tacagaaaactcactttgtaaacatc 32020
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>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02,
              complete sequence
          Length = 153623

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 11     aactcacttttttaacat 28
              ||||||||||||||||||
Sbjct: 137209 aactcacttttttaacat 137192
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>emb|BX470184.9| Zebrafish DNA sequence from clone CH211-214H13 in linkage group 23,
              complete sequence
          Length = 205568

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 9      aaaactcacttttttaac 26
              ||||||||||||||||||
Sbjct: 172744 aaaactcacttttttaac 172727
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>gb|AC120838.10| Pan troglodytes clone ch251-239a19, complete sequence
          Length = 150256

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 10     aaactcacttttttaaca 27
              ||||||||||||||||||
Sbjct: 142116 aaactcacttttttaaca 142133
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>gb|AC066593.4| Homo sapiens chromosome 3 clone RP11-344O5 map 3p, complete sequence
          Length = 165873

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     tacagaaaactcactttt 21
             ||||||||||||||||||
Sbjct: 75616 tacagaaaactcactttt 75633
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>gb|AC079222.17| Mus musculus chromosome 1, clone RP22-292L24, complete sequence
          Length = 159700

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     gaaaactcacttttttaa 25
             ||||||||||||||||||
Sbjct: 65952 gaaaactcacttttttaa 65969
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>gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, complete sequence
          Length = 203493

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 10     aaactcacttttttaaca 27
              ||||||||||||||||||
Sbjct: 181727 aaactcacttttttaaca 181710
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>emb|BX930226.2| Gallus gallus finished cDNA, clone ChEST588d8
          Length = 694

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 20  ttttaacatctccactgc 37
           ||||||||||||||||||
Sbjct: 529 ttttaacatctccactgc 512
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>emb|BX933249.2| Gallus gallus finished cDNA, clone ChEST513k3
          Length = 716

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 20  ttttaacatctccactgc 37
           ||||||||||||||||||
Sbjct: 547 ttttaacatctccactgc 530
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>emb|CR352558.1| Gallus gallus finished cDNA, clone ChEST342f4
          Length = 708

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 20  ttttaacatctccactgc 37
           ||||||||||||||||||
Sbjct: 533 ttttaacatctccactgc 516
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 11       aactcacttttttaacat 28
                ||||||||||||||||||
Sbjct: 33786766 aactcacttttttaacat 33786749
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>gb|AC150259.4| Aedes aegypti, clone XX-10B1, complete sequence
          Length = 206579

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     cagaaaactcactttttt 23
             ||||||||||||||||||
Sbjct: 69673 cagaaaactcactttttt 69656
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>gb|AC163761.3| Pan troglodytes BAC clone CH251-214O19 from chromosome unknown,
            complete sequence
          Length = 193316

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 3    ttacagaaaactcactttttta 24
            ||||| ||||||||||||||||
Sbjct: 3432 ttacaaaaaactcactttttta 3453
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>gb|AC092684.2| Homo sapiens BAC clone RP11-746G4 from 2, complete sequence
          Length = 153371

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    tttttaacatctccactg 36
             ||||||||||||||||||
Sbjct: 16573 tttttaacatctccactg 16556
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>emb|BX935688.1| Gallus gallus finished cDNA, clone ChEST755p12
          Length = 768

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 20  ttttaacatctccactgc 37
           ||||||||||||||||||
Sbjct: 597 ttttaacatctccactgc 580
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>gb|AC068448.10| Homo sapiens chromosome 15, clone RP11-624A21, complete sequence
          Length = 165208

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 10    aaactcacttttttaaca 27
             ||||||||||||||||||
Sbjct: 23081 aaactcacttttttaaca 23064
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>gb|AC116898.11| Mus musculus chromosome 7, clone RP24-531E8, complete sequence
          Length = 148793

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 3      ttacagaaaactcacttt 20
              ||||||||||||||||||
Sbjct: 139676 ttacagaaaactcacttt 139693
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>emb|BX005004.12| Zebrafish DNA sequence from clone DKEY-11L18, complete sequence
          Length = 216131

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 13    ctcacttttttaacatct 30
             ||||||||||||||||||
Sbjct: 31558 ctcacttttttaacatct 31575
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>emb|AL929555.20| Mouse DNA sequence from clone RP24-427F7 on chromosome 2, complete
             sequence
          Length = 155137

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     cagaaaactcactttttt 23
             ||||||||||||||||||
Sbjct: 48535 cagaaaactcactttttt 48518
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>gb|AC005157.1|AC005157 Homo sapiens PAC clone RP5-1108A12 from 14q24.3, complete sequence
          Length = 164275

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    tttttaacatctccactg 36
             ||||||||||||||||||
Sbjct: 78555 tttttaacatctccactg 78538
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>gb|U41625.1| Caenorhabditis elegans cosmid K03A1, complete sequence
          Length = 35227

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ttttttaacatctccact 35
             ||||||||||||||||||
Sbjct: 10693 ttttttaacatctccact 10676
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>emb|CR933768.7| Zebrafish DNA sequence from clone CH211-176D22 in linkage group 19,
             complete sequence
          Length = 50629

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ttttttaacatctccact 35
             ||||||||||||||||||
Sbjct: 19539 ttttttaacatctccact 19522
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>emb|AL032657.1|CEY47H9C Caenorhabditis elegans YAC Y47H9C, complete sequence
          Length = 75342

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 6     cagaaaactcactttttt 23
             ||||||||||||||||||
Sbjct: 62880 cagaaaactcactttttt 62897
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>dbj|AP003558.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-693A6, complete
             sequence
          Length = 182976

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     gaaaactcacttttttaa 25
             ||||||||||||||||||
Sbjct: 18096 gaaaactcacttttttaa 18113
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>gb|AC145363.4| Dasypus novemcinctus clone VMRC5-356N21, complete sequence
          Length = 108046

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 3     ttacagaaaactcacttt 20
             ||||||||||||||||||
Sbjct: 79255 ttacagaaaactcacttt 79272
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>dbj|AP001984.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-597K9, complete
             sequence
          Length = 62000

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 10    aaactcacttttttaaca 27
             ||||||||||||||||||
Sbjct: 30028 aaactcacttttttaaca 30011
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>dbj|AP003394.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-278J24, complete
              sequences
          Length = 164778

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 8      gaaaactcacttttttaa 25
              ||||||||||||||||||
Sbjct: 164677 gaaaactcacttttttaa 164694
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>emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 in linkage group 12,
              complete sequence
          Length = 140401

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 16     acttttttaacatctcca 33
              ||||||||||||||||||
Sbjct: 107282 acttttttaacatctcca 107265
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>emb|BX004845.5| Zebrafish DNA sequence from clone CH211-67O1, complete sequence
          Length = 165089

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 13     ctcacttttttaacatct 30
              ||||||||||||||||||
Sbjct: 144001 ctcacttttttaacatct 144018
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>emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in linkage group 12, complete
              sequence
          Length = 262809

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 16     acttttttaacatctcca 33
              ||||||||||||||||||
Sbjct: 128153 acttttttaacatctcca 128170
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>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 2      gttacagaaaactcactt 19
              ||||||||||||||||||
Sbjct: 316367 gttacagaaaactcactt 316350
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>gb|AC102227.17| Mus musculus chromosome 1, clone RP24-62C22, complete sequence
          Length = 201757

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 19    tttttaacatctccactg 36
             ||||||||||||||||||
Sbjct: 55944 tttttaacatctccactg 55961
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>emb|AL670360.8| Mouse DNA sequence from clone RP23-3A4 on chromosome X, complete sequence
          Length = 183543

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 20     ttttaacatctccactgc 37
              ||||||||||||||||||
Sbjct: 100409 ttttaacatctccactgc 100392
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>dbj|AP004249.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-743I15, complete
              sequences
          Length = 191109

 Score = 36.2 bits (18), Expect = 4.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 8      gaaaactcacttttttaa 25
              ||||||||||||||||||
Sbjct: 113082 gaaaactcacttttttaa 113099


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 483,123
Number of Sequences: 3902068
Number of extensions: 483123
Number of successful extensions: 126824
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126635
Number of HSP's gapped (non-prelim): 189
length of query: 39
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 19
effective length of database: 17,155,003,908
effective search space: 325945074252
effective search space used: 325945074252
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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