>gb|M95818.1|WHTIF4F28A Wheat (clone p28-1) initiation factor isozyme 4F p82 subunit mRNA,
           complete cds
          Length = 1079

 Score =  232 bits (117), Expect = 7e-58
 Identities = 159/173 (91%), Gaps = 5/173 (2%)
 Strand = Plus / Minus

                                                                       
Query: 212 agcaaaacgacataatagattggaaaattgcctcaaacaacagtatcagagg-----cga 266
           |||||||||||||| ||||||||||||||||||||||||||| || | ||||     |||
Sbjct: 815 agcaaaacgacatagtagattggaaaattgcctcaaacaacattagctgaggcggttcga 756

                                                                       
Query: 267 atctcggtgaaacactacacggacacttttccgagctgcggtcttcatcatgtgtgcagc 326
           |||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 755 atctcggtaaaacactacacggccacttttccaagctgcggtcttcatcatgtgtgcagc 696

                                                                
Query: 327 cttacacggtgtatcgtccacctctgcttggtttctgacttctcgagtcatcg 379
           |||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 695 cttagacggtgtatcgtccacctctgcttggtttctgacttcttgagtcatcg 643



 Score =  167 bits (84), Expect = 3e-38
 Identities = 171/200 (85%), Gaps = 10/200 (5%)
 Strand = Plus / Minus

                                                                        
Query: 26   cctgacagcttttcaaagcccacaaaagtggactaaacagccaattc---------gcaa 76
            |||| |||||||||  |||||||||| |||||||||||||||||| |         ||| 
Sbjct: 1020 cctgccagcttttcggagcccacaaatgtggactaaacagccaatacctaagtcttgcac 961

                                                                        
Query: 77   aaaggcaaacatatgttttaaacagtgatgatgcatcaaacttcccacatgaggtggggt 136
            ||||||||| ||||| || ||||||||||||||||||  ||||||||||  |||||||||
Sbjct: 960  aaaggcaaatatatgcttaaaacagtgatgatgcatcccacttcccacacaaggtggggt 901

                                                                        
Query: 137  tcctcctctgggtttgttgaaatcgagggatattgcgaggaaaattgagtgcgtacaaca 196
            |||||||||||| ||||| ||||| ||||||||||||||||||||||||||| ||| |||
Sbjct: 900  tcctcctctggg-ttgttaaaatcaagggatattgcgaggaaaattgagtgcatacgaca 842

                                
Query: 197  tctctgtatgccacaagcaa 216
            |||||| || ||||||||||
Sbjct: 841  tctctgcataccacaagcaa 822

>emb|AJ704455.1| Hordeum vulgare partial eIF(iso)4E gene for putative eukaryotic
            translation initiation factor (iso)4E, exons 3-5, line
            OWB-D
          Length = 1412

 Score =  228 bits (115), Expect = 1e-56
 Identities = 115/115 (100%)
 Strand = Plus / Minus

                                                                        
Query: 264  cgaatctcggtgaaacactacacggacacttttccgagctgcggtcttcatcatgtgtgc 323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 cgaatctcggtgaaacactacacggacacttttccgagctgcggtcttcatcatgtgtgc 1353

                                                                   
Query: 324  agccttacacggtgtatcgtccacctctgcttggtttctgacttctcgagtcatc 378
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 agccttacacggtgtatcgtccacctctgcttggtttctgacttctcgagtcatc 1298

>gb|BT009308.1| Triticum aestivum clone wlm1.pk0019.c10:fis, full insert mRNA
           sequence
          Length = 1162

 Score =  202 bits (102), Expect = 6e-49
 Identities = 159/176 (90%), Gaps = 9/176 (5%)
 Strand = Plus / Minus

                                                                       
Query: 212 agcaaaacgac---ataatagattggaaaattgcctcaaacaacagtatcagagg----- 263
           |||||||||||   ||||||||||||||||||||||||||||||| || | ||||     
Sbjct: 814 agcaaaacgacataataatagattggaaaattgcctcaaacaacattagctgaggcggtt 755

                                                                       
Query: 264 cgaatctcggtgaaacactacacggacacttttccgagctgcggtcttcatcatgtgtgc 323
           ||||||||||| |||||||||| || ||| |||| |||||||||||||||||||| ||||
Sbjct: 754 cgaatctcggtcaaacactacaaggccac-tttctgagctgcggtcttcatcatgcgtgc 696

                                                                   
Query: 324 agccttacacggtgtatcgtccacctctgcttggtttctgacttctcgagtcatcg 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 agccttacacggtgtatcgtccacctctgcttggtttctgacttctcgagtcatcg 640



 Score =  186 bits (94), Expect = 4e-44
 Identities = 167/191 (87%), Gaps = 9/191 (4%)
 Strand = Plus / Minus

                                                                        
Query: 32   agcttttcaaagcccacaaaagtggactaaacagccaattc--------gcaaaaaggca 83
            ||||||||||||||||||||||||||||||||||||||| |        ||| |||||||
Sbjct: 1012 agcttttcaaagcccacaaaagtggactaaacagccaataccaagtcttgcacaaaggca 953

                                                                        
Query: 84   aacatatgttttaaacagtgatgatgcatcaaacttcccacatgaggtggggttcctcct 143
            |||||||  || ||||||||||||||||||  |||||||||| ||| ||| |||||||||
Sbjct: 952  aacatatacttaaaacagtgatgatgcatcccacttcccacacgagatggagttcctcct 893

                                                                        
Query: 144  ctgggtttgttgaaatcgagggatattgcgaggaaaattgagtgcgtacaacatctctgt 203
            ||||||| |||| |||| ||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 892  ctgggtt-gttgtaatcaagggatattgcgaggaaaaatgagtgcatacaacatctctgt 834

                       
Query: 204  atgccacaagc 214
            || ||||||||
Sbjct: 833  ataccacaagc 823

>gb|M95819.1|WHTIF4F28B Wheat (clone p28-62) initiation factor isozyme 4F p28 subunit mRNA,
           complete cds
          Length = 1054

 Score =  202 bits (102), Expect = 6e-49
 Identities = 159/176 (90%), Gaps = 9/176 (5%)
 Strand = Plus / Minus

                                                                       
Query: 212 agcaaaacgac---ataatagattggaaaattgcctcaaacaacagtatcagagg----- 263
           |||||||||||   ||||||||||||||||||||||||||||||| || | ||||     
Sbjct: 817 agcaaaacgacataataatagattggaaaattgcctcaaacaacattagctgaggcggtt 758

                                                                       
Query: 264 cgaatctcggtgaaacactacacggacacttttccgagctgcggtcttcatcatgtgtgc 323
           ||||||||||| |||||||||| || ||| |||| |||||||||||||||||||| ||||
Sbjct: 757 cgaatctcggtcaaacactacaaggccac-tttctgagctgcggtcttcatcatgcgtgc 699

                                                                   
Query: 324 agccttacacggtgtatcgtccacctctgcttggtttctgacttctcgagtcatcg 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 agccttacacggtgtatcgtccacctctgcttggtttctgacttctcgagtcatcg 643



 Score =  180 bits (91), Expect = 2e-42
 Identities = 164/188 (87%), Gaps = 9/188 (4%)
 Strand = Plus / Minus

                                                                        
Query: 35   ttttcaaagcccacaaaagtggactaaacagccaattc--------gcaaaaaggcaaac 86
            |||||||||||||||||||||||||||||||||||| |        ||| ||||||||||
Sbjct: 1012 ttttcaaagcccacaaaagtggactaaacagccaataccaagtcttgcacaaaggcaaac 953

                                                                        
Query: 87   atatgttttaaacagtgatgatgcatcaaacttcccacatgaggtggggttcctcctctg 146
            ||||  || ||||||||||||||||||  |||||||||| ||| ||| ||||||||||||
Sbjct: 952  atatacttaaaacagtgatgatgcatcccacttcccacacgagatggagttcctcctctg 893

                                                                        
Query: 147  ggtttgttgaaatcgagggatattgcgaggaaaattgagtgcgtacaacatctctgtatg 206
            |||| |||| |||| ||||||||||||||||||| ||||||| |||||||||||||||| 
Sbjct: 892  ggtt-gttgtaatcaagggatattgcgaggaaaaatgagtgcatacaacatctctgtata 834

                    
Query: 207  ccacaagc 214
            ||||||||
Sbjct: 833  ccacaagc 826

>gb|AY109572.1| Zea mays CL1008_1 mRNA sequence
          Length = 1955

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 327 cttacacggtgtatcgtccacctctgcttggtttctgacttctcgagtc 375
           ||||||||||||| ||||||||||||||||| || |  |||||||||||
Sbjct: 847 cttacacggtgtaccgtccacctctgcttggcttatcccttctcgagtc 799

>ref|NM_196932.1| Oryza sativa (japonica cultivar-group) cap-binding protein p28
           (OSJNBa0006L06.9), mRNA
          Length = 993

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 327 cttacacggtgtatcgtccacctctgcttggtttct 362
           |||||||| |||| ||||||||||||||||||||||
Sbjct: 752 cttacacgttgtaccgtccacctctgcttggtttct 717

>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete
             sequence
          Length = 162339

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 327   cttacacggtgtatcgtccacctctgcttggtttct 362
             |||||||| |||| ||||||||||||||||||||||
Sbjct: 90565 cttacacgttgtaccgtccacctctgcttggtttct 90530

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                    
Query: 327      cttacacggtgtatcgtccacctctgcttggtttct 362
                |||||||| |||| ||||||||||||||||||||||
Sbjct: 16746048 cttacacgttgtaccgtccacctctgcttggtttct 16746013

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                    
Query: 327      cttacacggtgtatcgtccacctctgcttggtttct 362
                |||||||| |||| ||||||||||||||||||||||
Sbjct: 16755088 cttacacgttgtaccgtccacctctgcttggtttct 16755053

>gb|U34598.1|OSU34598 Oryza sativa cap-binding protein p28 mRNA, complete cds
          Length = 1010

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 327 cttacacggtgtatcgtccacctctgcttggtttct 362
           |||||||| |||| ||||||||||||||||||||||
Sbjct: 769 cttacacgttgtaccgtccacctctgcttggtttct 734

>emb|BX324131.6| Zebrafish DNA sequence from clone CH211-119E14 in linkage group 7,
             complete sequence
          Length = 198318

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 73    gcaaaaaggcaaacatatgttttaaa 98
             ||||||| ||||||||||||||||||
Sbjct: 88730 gcaaaaaagcaaacatatgttttaaa 88755

>emb|AL079352.3|CNS00M8V Human chromosome 14 DNA sequence BAC R-388G3 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176833

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 75     aaaaaggcaaacatatgtttta 96
              ||||||||||||||||||||||
Sbjct: 127413 aaaaaggcaaacatatgtttta 127434

>emb|AL451075.15| Human DNA sequence from clone RP11-215I23 on chromosome 1 Contains the
             3' end of the SOAT1 gene for sterol O-acyltransferase
             (acyl-Coenzyme A: cholesterol acyltransferase) 1, the 5'
             end of a novel gene, a MADS box transcription enhancer
             factor 2 polypeptide A (myocyte enhancer factor 2A)
             (MEF2A) pseudogene and a heterogeneous nuclear
             ribonucleoprotein A1 (HNRPA1) pseudogene, complete
             sequence
          Length = 153937

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cttttcaaagcccacaaaagt 54
             |||||||||||||||||||||
Sbjct: 94886 cttttcaaagcccacaaaagt 94866

>emb|AL645469.18| Mouse DNA sequence from clone RP23-340E18 on chromosome 11 Contains the
             Mylc2a gene for myosin light chain, regulatory A, the Gck
             gene for glucokinase, a novel gene, the gene for
             prenylated SNARE protein (Ykt6), the Camk2d gene for
             calcium/calmodulin-dependent protein kinase II delta and
             two CpG islands, complete sequence
          Length = 172356

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    caaaagtggactaaacagcca 68
             |||||||||||||||||||||
Sbjct: 97460 caaaagtggactaaacagcca 97480

>emb|CR607562.1| full-length cDNA clone CS0DI011YO18 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1783

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 131 tggggttcctcctctgggttt 151
           |||||||||||||||||||||
Sbjct: 776 tggggttcctcctctgggttt 756

>gb|M19748.1|ACRTRVB Reticuloendotheliosis revertant virus (strain T) proviral RNA,
           clone CM136
          Length = 695

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 85  acatatgttttaaacagtgat 105
           |||||||||||||||||||||
Sbjct: 86  acatatgttttaaacagtgat 106

>gb|DQ207685.1| Zea mays cultivar inbred line Mo17 IDP298 marker
          Length = 1278

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 327 cttacacggtgtatcgtccacctctgct 354
           ||||||||||||| || |||||||||||
Sbjct: 13  cttacacggtgtaccgcccacctctgct 40

>gb|DQ207684.1| Zea mays cultivar B73 IDP298 marker
          Length = 1145

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 327  cttacacggtgtatcgtccacctctgct 354
            ||||||||||||| || |||||||||||
Sbjct: 1144 cttacacggtgtaccgcccacctctgct 1117

>gb|AC125329.4| Mus musculus BAC clone RP23-198F7 from 10, complete sequence
          Length = 211931

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    atgcatcaaacttcccacat 126
              ||||||||||||||||||||
Sbjct: 210527 atgcatcaaacttcccacat 210546

>gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, complete sequence
          Length = 210189

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    atgcatcaaacttcccacat 126
              ||||||||||||||||||||
Sbjct: 177211 atgcatcaaacttcccacat 177192

>gb|AC127319.4| Mus musculus BAC clone RP23-229N3 from 5, complete sequence
          Length = 188794

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    aggcaaacatatgttttaaa 98
             ||||||||||||||||||||
Sbjct: 19484 aggcaaacatatgttttaaa 19465

>emb|CR589874.12| Zebrafish DNA sequence from clone DKEY-259N11 in linkage group 13,
             complete sequence
          Length = 145629

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   aaaattgcctcaaacaacag 254
             ||||||||||||||||||||
Sbjct: 47839 aaaattgcctcaaacaacag 47820

>emb|CR450818.8| Zebrafish DNA sequence from clone DKEY-172M14 in linkage group 5,
             complete sequence
          Length = 150883

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aacatatgttttaaacagtg 103
             ||||||||||||||||||||
Sbjct: 51363 aacatatgttttaaacagtg 51382

>emb|CR788242.3| Zebrafish DNA sequence from clone DKEY-239H16 in linkage group 13,
             complete sequence
          Length = 143940

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   aaaattgcctcaaacaacag 254
             ||||||||||||||||||||
Sbjct: 42345 aaaattgcctcaaacaacag 42364

>emb|BX470139.9| Zebrafish DNA sequence from clone CH211-141O12 in linkage group 5,
              complete sequence
          Length = 185997

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     aaacatatgttttaaacagt 102
              ||||||||||||||||||||
Sbjct: 185428 aaacatatgttttaaacagt 185447

>emb|CR933766.8| Zebrafish DNA sequence from clone CH211-177K24 in linkage group 19,
             complete sequence
          Length = 18378

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    aacatatgttttaaacagtg 103
             ||||||||||||||||||||
Sbjct: 13674 aacatatgttttaaacagtg 13655

>gb|AC116469.13| Mus musculus chromosome 5, clone RP23-171F16, complete sequence
          Length = 207364

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    aggcaaacatatgttttaaa 98
             ||||||||||||||||||||
Sbjct: 35360 aggcaaacatatgttttaaa 35379

>gb|AF076955.1|AF076955 Zea mays eukaryotic translation initiation factor p28 subunit
           (eIFiso-4E) mRNA, complete cds
          Length = 1166

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 327 cttacacggtgtatcgtccacctctgct 354
           ||||||||||||| || |||||||||||
Sbjct: 801 cttacacggtgtaccgcccacctctgct 774

>gb|AC134825.5| Mus musculus BAC clone RP24-456L17 from 9, complete sequence
          Length = 173663

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   acatgaggtggggttcctcc 142
             ||||||||||||||||||||
Sbjct: 54497 acatgaggtggggttcctcc 54478

>gb|AF037220.1|AF037220 Mesembryanthemum crystallinum inositol monophosphatase (IMP1) mRNA,
           complete cds
          Length = 1229

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 aattgcctcaaacaacagta 256
           ||||||||||||||||||||
Sbjct: 238 aattgcctcaaacaacagta 257


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,435,227
Number of Sequences: 3902068
Number of extensions: 3435227
Number of successful extensions: 64701
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64604
Number of HSP's gapped (non-prelim): 92
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)