Clone Name | rbart52g03 |
---|---|
Clone Library Name | barley_pub |
>gb|AC008641.7| Homo sapiens chromosome 5 clone CTB-17P3, complete sequence Length = 176629 Score = 44.1 bits (22), Expect = 0.055 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 aagattagaagtctttattccc 40 |||||||||||||||||||||| Sbjct: 97489 aagattagaagtctttattccc 97468
>gb|AC008666.5|AC008666 Homo sapiens chromosome 5 clone CTB-35A8, complete sequence Length = 99108 Score = 44.1 bits (22), Expect = 0.055 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 aagattagaagtctttattccc 40 |||||||||||||||||||||| Sbjct: 1414 aagattagaagtctttattccc 1435
>emb|Z98597.1|SPAC17H9 S.pombe chromosome I cosmid c17H9 Length = 38515 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 gaattgatagaaaacgtta 72 ||||||||||||||||||| Sbjct: 21498 gaattgatagaaaacgtta 21516
>emb|AL109754.13|HSDJ839B4 Human DNA sequence from clone RP5-839B4 on chromosome 20 Contains the 3' end of a novel gene, part of a novel gene, the ANKRD5 gene for ankyrin repeat domain 5 and a CpG island, complete sequence Length = 165010 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 aagtctttattcccctgtt 45 ||||||||||||||||||| Sbjct: 32872 aagtctttattcccctgtt 32854
>gb|AC010026.7| Drosophila melanogaster 3L BAC RP98-1I24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179776 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 agcaaaatcgaaagacaag 21 ||||||||||||||||||| Sbjct: 45137 agcaaaatcgaaagacaag 45119
>gb|AC011907.4| Drosophila melanogaster 3L BAC RP98-18B21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164597 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 agcaaaatcgaaagacaag 21 ||||||||||||||||||| Sbjct: 31947 agcaaaatcgaaagacaag 31965
>gb|AC182841.2| Pan troglodytes BAC clone CH251-667I24 from chromosome 11, complete sequence Length = 189657 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 ccctgttgagatcaggaat 57 ||||||||||||||||||| Sbjct: 76922 ccctgttgagatcaggaat 76904
>gb|AC010103.10|AC010103 Homo sapiens clone RP11-508H21, complete sequence Length = 194038 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 gattagaagtctttattcc 39 ||||||||||||||||||| Sbjct: 28974 gattagaagtctttattcc 28956
>gb|AC138674.7| Mus musculus chromosome 7, clone RP23-410I10, complete sequence Length = 173504 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 ccctgttgagatcaggaat 57 ||||||||||||||||||| Sbjct: 31203 ccctgttgagatcaggaat 31221
>emb|BX470240.8| Zebrafish DNA sequence from clone CH211-92L17 in linkage group 4, complete sequence Length = 100845 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 aaatcgaaagacaagatta 25 ||||||||||||||||||| Sbjct: 10576 aaatcgaaagacaagatta 10594
>gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, complete sequence Length = 186431 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 13 aaagacaagattagaagtcttta 35 |||||||||||||||| |||||| Sbjct: 63470 aaagacaagattagaaatcttta 63448
>gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 of 83 of the complete sequence Length = 307657 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 agcaaaatcgaaagacaag 21 ||||||||||||||||||| Sbjct: 197186 agcaaaatcgaaagacaag 197204
>dbj|AP003122.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-313I2, complete sequence Length = 137888 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 ccctgttgagatcaggaat 57 ||||||||||||||||||| Sbjct: 10452 ccctgttgagatcaggaat 10434
>emb|AL928943.9| Mouse DNA sequence from clone RP23-435J15 on chromosome 2, complete sequence Length = 160516 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 attagaagtctttattccc 40 ||||||||||||||||||| Sbjct: 142579 attagaagtctttattccc 142561 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 637,053 Number of Sequences: 3902068 Number of extensions: 637053 Number of successful extensions: 43077 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43058 Number of HSP's gapped (non-prelim): 19 length of query: 82 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 61 effective length of database: 17,151,101,840 effective search space: 1046217212240 effective search space used: 1046217212240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)